
Microexon ID | Ta_3A:518487160-518487172:+ |
Species | Triticum Aestivum | Coordinates | 3A:518487160..518487172 |
Microexon Cluster ID | MEP31 |
Size | 13 |
Phase | 0 |
Pfam Domain Motif | TPT |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,13,47 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCTGTYATGTCTGGKTTYCGYTGGTSYATGACTCARATTCTTYTGCAGAAAGAARMHTAYGGTYTRAARAATCCAYTTACCTTGATGAGYTATGTKACYCCAGTGATG |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | AAAGAGGAATATG |
Microexon Amino Acid seq | KEEYG |
Microexon-tag DNA Seq | GCTGTCATGTCTGGTTTCCGCTGGTGCATGACACAGATTCTCCTCCAGAAAGAGGAATATGGATTAAAGAACCCCTTCACCTTAATGAGTTATGTTACCCCGGTGATG |
Microexon-tag Amino Acid Seq | AVMSGFRWCMTQILLQKEEYGLKNPFTLMSYVTPVM |
Microexon-tag spanning region | 518486969-518487535 |
Microexon-tag prediction score | 0.9688 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS3A02G289500.1x |
Reference Transcript ID | TraesCS3A02G289500.1 |
Gene ID | TraesCS3A02G289500 |
Gene Name | NA |
Transcript ID | TraesCS3A02G289500.1 |
Protein ID | |
Gene ID | TraesCS3A02G289500 |
Gene Name | |
Pfam domain motif | TPT |
Motif E-value | 1.50E-30 |
Motif start | 121 |
Motif end | 421 |
Protein seq | >TraesCS3A02G289500.1 MGDCAVENGHAHPKEEDAPEVPVEPAEGAAEPQVVAGGQKKQGAIRREPSFSRWCKDPSAAPNAPAGAASPASAPSDDDS EEFELPLLPPAAAAHRSPMDIEAGAAAGSDSVPVSPWLIAKIIFLIASWYTLSTCLTLYNKEMLGKRMWKFPAPFLMNTV HFTMQAVASRVIVWFQQRGMEAERYTMSWKDYFQRVVPTALATALDINLTNISFVFITVTFATMCKSGAPIFILLFAFLF RLEKPSFNILGIMLIVSVGVLLTVAKETQFNLWGFIFIMLAAVMSGFRWCMTQILLQKEEYGLKNPFTLMSYVTPVMAIT TAIISIAMDPWHEVRASHFFDSPDHILRSILLMLLGGALAFFMVLTEYVLVSVTSAVTVTIAGIVKEAVTILVAVLFFND PFTWLKGFGLATIIFGVSLFNLYKYHRFKKDRHSKHVDPNSHSSNDASKYVIIDDDIEDQDDTG* |
CDS seq | >TraesCS3A02G289500.1 ATGGGGGACTGCGCCGTGGAGAACGGCCACGCCCACCCGAAGGAAGAGGACGCACCGGAAGTGCCCGTCGAGCCCGCGGA GGGCGCCGCGGAGCCGCAGGTGGTGGCTGGCGGGCAGAAGAAGCAGGGAGCGATACGCAGGGAGCCGTCGTTCTCGCGGT GGTGCAAGGACCCCTCCGCGGCGCCCAATGCCCCCGCCGGCGCCGCTTCGCCGGCCTCTGCGCCGAGCGACGATGATTCG GAGGAGTTCGAGCTGCCGCTTCTGCCGCCCGCCGCCGCCGCCCACCGCTCGCCGATGGATATCGAGGCAGGAGCGGCGGC GGGATCTGACAGCGTCCCAGTCTCGCCGTGGCTGATCGCCAAGATTATATTTCTGATAGCGAGTTGGTACACGCTGAGCA CCTGCTTGACGCTGTATAACAAGGAGATGCTTGGGAAGCGCATGTGGAAGTTCCCTGCCCCGTTCCTGATGAACACGGTG CATTTCACCATGCAGGCTGTTGCGTCGAGGGTGATCGTGTGGTTCCAGCAACGGGGCATGGAGGCAGAGCGTTATACAAT GTCATGGAAAGATTACTTTCAGCGAGTTGTTCCAACAGCTTTGGCTACTGCTCTTGATATAAATTTGACCAACATTTCGT TTGTTTTCATTACTGTGACATTCGCTACAATGTGTAAATCTGGGGCTCCAATTTTCATTCTTCTCTTTGCTTTTTTATTC AGGCTAGAGAAGCCGAGCTTTAACATTCTTGGAATCATGCTGATTGTTTCTGTTGGAGTTCTACTGACAGTTGCTAAAGA GACACAATTTAATCTTTGGGGATTTATATTTATTATGCTTGCTGCTGTCATGTCTGGTTTCCGCTGGTGCATGACACAGA TTCTCCTCCAGAAAGAGGAATATGGATTAAAGAACCCCTTCACCTTAATGAGTTATGTTACCCCGGTGATGGCAATAACA ACTGCAATTATTTCCATTGCCATGGATCCATGGCATGAAGTCAGAGCAAGTCACTTCTTTGATAGTCCAGATCACATATT AAGAAGCATCTTATTGATGCTTCTAGGTGGTGCTTTGGCATTCTTCATGGTTTTGACAGAATATGTTCTGGTTTCTGTAA CAAGTGCTGTAACAGTGACCATAGCTGGGATTGTCAAGGAAGCTGTCACAATTTTGGTTGCTGTGCTTTTCTTCAATGAT CCATTTACCTGGTTAAAGGGATTTGGACTGGCAACAATTATATTTGGTGTCAGCCTTTTCAATCTGTACAAGTATCATAG GTTCAAGAAAGACCGCCACAGTAAACATGTTGACCCAAATTCCCATTCCTCCAATGATGCCTCAAAATATGTTATCATTG ATGATGATATTGAAGATCAGGATGATACAGGCTGA |
Ta_3A:518487160-518487172:+ does not have available information here.