Microexon ID Sl_7:63769781-63769793:-
Species Solanum   Lycopersicum
Coordinates 7:63769781..63769793
Microexon Cluster ID MEP31
Size 13
Phase 0
Pfam Domain Motif TPT
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,13,47
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GCTGTYATGTCTGGKTTYCGYTGGTSYATGACTCARATTCTTYTGCAGAAAGAARMHTAYGGTYTRAARAATCCAYTTACCTTGATGAGYTATGTKACYCCAGTGATG
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq AAAGAAATCTACG
Microexon Amino Acid seq KEIYG
Microexon-tag DNA Seq GCTGTTATGTCTGGGTTCCGCTGGACTATGACTCAGATACTTCTGCAGAAAGAAATCTACGGTTTAAAAAATCCACTCACACTAATGAGCTACGTTACTCCAGTAATG
Microexon-tag Amino Acid Seq AVMSGFRWTMTQILLQKEIYGLKNPLTLMSYVTPVM
Microexon-tag spanning region63768258-63769981
Microexon-tag prediction score0.9661
Overlapped with the annotated transcript (%) 100
New Transcript ID Solyc07g055695.1.1x
Reference Transcript ID Solyc07g055695.1.1
Gene ID Solyc07g055695.1
Gene Name NA
Transcript ID Solyc07g055695.1.1
Protein ID
Gene ID Solyc07g055695.1
Gene Name
Pfam domain motif TPT
Motif E-value 4.60E-19
Motif start 5
Motif end 217
Protein seq >Solyc07g055695.1.1
MDVNLSNASLVFISVTFATMCKSAAPIFLLLFAFAFRLESPSLKLLGIMLIISIGVLLTVAKETEFEFWGFIFVMLAAVM
SGFRWTMTQILLQKEIYGLKNPLTLMSYVTPVMALSTAMLSLIFDPWQEFGSSSYFDSSWHITRSCLLMLFGGTLAFFMV
LTEYILVSVTSAVTVTIAGVVKEAVTIVVAVFYFHDKFTWMKGVGLITIMFGVSLFNLYKYDKLQKGNPNEDEISRSSMQ
NEAAKYVILEELEDQDDGP*
CDS seq >Solyc07g055695.1.1
ATGGATGTCAACCTAAGCAATGCATCCCTTGTTTTCATATCAGTGACATTTGCTACTATGTGCAAATCTGCAGCACCGAT
CTTTCTCCTACTCTTCGCTTTTGCTTTCAGGTTGGAGTCTCCGAGTTTGAAGCTGCTAGGGATCATGTTGATTATTTCTA
TTGGGGTATTATTAACAGTTGCAAAGGAAACGGAGTTTGAATTTTGGGGGTTTATCTTTGTTATGCTAGCTGCTGTTATG
TCTGGGTTCCGCTGGACTATGACTCAGATACTTCTGCAGAAAGAAATCTACGGTTTAAAAAATCCACTCACACTAATGAG
CTACGTTACTCCAGTAATGGCTCTTTCAACTGCTATGCTGTCTCTGATTTTTGATCCATGGCAAGAGTTTGGAAGCAGCA
GTTACTTCGATAGCTCATGGCACATAACTAGAAGTTGTTTGCTGATGCTTTTTGGTGGAACCTTGGCTTTCTTTATGGTG
TTGACGGAATATATTCTCGTCTCTGTTACTAGTGCAGTAACAGTGACAATAGCAGGAGTCGTAAAGGAGGCTGTCACTAT
CGTGGTTGCTGTGTTTTACTTCCATGATAAGTTTACCTGGATGAAAGGGGTCGGTCTCATCACAATAATGTTTGGTGTGA
GTTTGTTTAATTTGTACAAGTATGACAAATTACAGAAAGGTAATCCAAATGAAGATGAAATTTCACGATCCTCAATGCAA
AATGAGGCTGCAAAGTATGTTATTCTTGAAGAATTGGAAGATCAAGATGATGGTCCTTGA
Sl_7:63769781-63769793:- does not have available information here.