
Microexon ID | Sl_7:63769781-63769793:- |
Species | Solanum Lycopersicum | Coordinates | 7:63769781..63769793 |
Microexon Cluster ID | MEP31 |
Size | 13 |
Phase | 0 |
Pfam Domain Motif | TPT |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,13,47 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCTGTYATGTCTGGKTTYCGYTGGTSYATGACTCARATTCTTYTGCAGAAAGAARMHTAYGGTYTRAARAATCCAYTTACCTTGATGAGYTATGTKACYCCAGTGATG |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | AAAGAAATCTACG |
Microexon Amino Acid seq | KEIYG |
Microexon-tag DNA Seq | GCTGTTATGTCTGGGTTCCGCTGGACTATGACTCAGATACTTCTGCAGAAAGAAATCTACGGTTTAAAAAATCCACTCACACTAATGAGCTACGTTACTCCAGTAATG |
Microexon-tag Amino Acid Seq | AVMSGFRWTMTQILLQKEIYGLKNPLTLMSYVTPVM |
Microexon-tag spanning region | 63768258-63769981 |
Microexon-tag prediction score | 0.9661 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Solyc07g055695.1.1x |
Reference Transcript ID | Solyc07g055695.1.1 |
Gene ID | Solyc07g055695.1 |
Gene Name | NA |
Transcript ID | Solyc07g055695.1.1 |
Protein ID | |
Gene ID | Solyc07g055695.1 |
Gene Name | |
Pfam domain motif | TPT |
Motif E-value | 4.60E-19 |
Motif start | 5 |
Motif end | 217 |
Protein seq | >Solyc07g055695.1.1 MDVNLSNASLVFISVTFATMCKSAAPIFLLLFAFAFRLESPSLKLLGIMLIISIGVLLTVAKETEFEFWGFIFVMLAAVM SGFRWTMTQILLQKEIYGLKNPLTLMSYVTPVMALSTAMLSLIFDPWQEFGSSSYFDSSWHITRSCLLMLFGGTLAFFMV LTEYILVSVTSAVTVTIAGVVKEAVTIVVAVFYFHDKFTWMKGVGLITIMFGVSLFNLYKYDKLQKGNPNEDEISRSSMQ NEAAKYVILEELEDQDDGP* |
CDS seq | >Solyc07g055695.1.1 ATGGATGTCAACCTAAGCAATGCATCCCTTGTTTTCATATCAGTGACATTTGCTACTATGTGCAAATCTGCAGCACCGAT CTTTCTCCTACTCTTCGCTTTTGCTTTCAGGTTGGAGTCTCCGAGTTTGAAGCTGCTAGGGATCATGTTGATTATTTCTA TTGGGGTATTATTAACAGTTGCAAAGGAAACGGAGTTTGAATTTTGGGGGTTTATCTTTGTTATGCTAGCTGCTGTTATG TCTGGGTTCCGCTGGACTATGACTCAGATACTTCTGCAGAAAGAAATCTACGGTTTAAAAAATCCACTCACACTAATGAG CTACGTTACTCCAGTAATGGCTCTTTCAACTGCTATGCTGTCTCTGATTTTTGATCCATGGCAAGAGTTTGGAAGCAGCA GTTACTTCGATAGCTCATGGCACATAACTAGAAGTTGTTTGCTGATGCTTTTTGGTGGAACCTTGGCTTTCTTTATGGTG TTGACGGAATATATTCTCGTCTCTGTTACTAGTGCAGTAACAGTGACAATAGCAGGAGTCGTAAAGGAGGCTGTCACTAT CGTGGTTGCTGTGTTTTACTTCCATGATAAGTTTACCTGGATGAAAGGGGTCGGTCTCATCACAATAATGTTTGGTGTGA GTTTGTTTAATTTGTACAAGTATGACAAATTACAGAAAGGTAATCCAAATGAAGATGAAATTTCACGATCCTCAATGCAA AATGAGGCTGCAAAGTATGTTATTCTTGAAGAATTGGAAGATCAAGATGATGGTCCTTGA |
Sl_7:63769781-63769793:- does not have available information here.