
Microexon ID | Sb_3:62828864-62828876:+ |
Species | Sorghum Bicolor | Coordinates | 3:62828864..62828876 |
Microexon Cluster ID | MEP31 |
Size | 13 |
Phase | 0 |
Pfam Domain Motif | TPT |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,13,47 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCTGTYATGTCTGGKTTYCGYTGGTSYATGACTCARATTCTTYTGCAGAAAGAARMHTAYGGTYTRAARAATCCAYTTACCTTGATGAGYTATGTKACYCCAGTGATG |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | AAAGAGGAATACG |
Microexon Amino Acid seq | KEEYG |
Microexon-tag DNA Seq | GCTGTTATGTCTGGTTTCCGCTGGTCCATGACTCAGATTCTTCTCCAGAAAGAGGAATACGGATTAAAGAATCCTTTTACCTTGATGAGCCATGTTACCCCAGTAATG |
Microexon-tag Amino Acid Seq | AVMSGFRWSMTQILLQKEEYGLKNPFTLMSHVTPVM |
Microexon-tag spanning region | 62828654-62829935 |
Microexon-tag prediction score | 0.9827 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | KXG33369x |
Reference Transcript ID | KXG33369 |
Gene ID | SORBI_3003G296200 |
Gene Name | NA |
Transcript ID | KXG33369 |
Protein ID | |
Gene ID | SORBI_3003G296200 |
Gene Name | |
Pfam domain motif | TPT |
Motif E-value | 8.70E-31 |
Motif start | 126 |
Motif end | 425 |
Protein seq | >KXG33369 MGDCVVEDGHGHHQSEAVEGAVPLTVAVELDERSGESREEGGGQRKKVGGIRREPSFSRWCRDPSDAAASNTAAAAATSD SDDSEEFELPLLPSSSGGGSSPMDIEAGATARSDDLPISPRLLAKVIGLIACWYTLSTCLTLYNKEMLGKHMWKFPAPFL MNTVHFTLQAVASRAIVWFQQRGLEGGPSKMSWKDYCLRVVPTALATALDINLSNISLVFITVTFATMCKSASPIFILLF AFMFRLEKPSFSLLGIMLVVSFGVLLTVAKETEFNLWGFIFIMLAAVMSGFRWSMTQILLQKEEYGLKNPFTLMSHVTPV MAIVTAIISIVMDPWHDFRASHFFDSSAHIIRSSLLLLLGGALAFFMVLTEYVLVSVTSAVTVTVAGIVKEAVTILVAVL FFHDPFTWLKALGLAIIIFGVSLFNIYKYKRFKKGHHNEDTGTNIQSSNGTSKYVILDDDTEAQDDTG* |
CDS seq | >KXG33369 ATGGGGGACTGCGTTGTCGAGGACGGCCACGGGCACCACCAATCGGAGGCGGTGGAGGGCGCGGTTCCGTTGACGGTAGC CGTGGAGCTCGATGAGCGGTCGGGAGAGTCGCGGGAGGAGGGTGGCGGGCAGCGGAAGAAGGTTGGTGGGATCCGAAGGG AGCCGTCGTTCTCGCGGTGGTGCAGGGACCCCTCTGACGCCGCCGCCTCCAATACCGCCGCTGCTGCGGCGACCAGCGAC AGCGACGACTCAGAGGAGTTCGAGCTGCCGCTCCTGCCATCCTCCTCGGGCGGCGGCAGCTCACCGATGGACATTGAGGC GGGGGCGACGGCGAGATCTGATGATCTGCCGATCTCGCCGAGGTTGCTTGCGAAGGTCATCGGGTTGATAGCGTGTTGGT ACACGCTTAGCACATGCTTGACGCTGTACAACAAGGAGATGCTGGGGAAGCACATGTGGAAGTTCCCGGCGCCATTCCTG ATGAACACAGTGCATTTCACGTTGCAGGCTGTGGCGTCCAGGGCCATCGTGTGGTTCCAGCAACGCGGCCTGGAGGGAGG GCCAAGTAAAATGTCGTGGAAGGATTACTGTTTACGAGTTGTCCCAACAGCTTTGGCTACTGCTCTTGATATAAATCTGA GCAACATTTCACTTGTTTTCATTACTGTGACATTTGCTACAATGTGCAAATCGGCTTCTCCAATTTTCATTCTTCTGTTT GCTTTTATGTTCAGGCTTGAGAAACCGAGCTTTAGCCTTCTTGGAATCATGCTGGTTGTTTCATTTGGAGTTCTACTAAC AGTTGCTAAAGAGACAGAATTTAATCTGTGGGGATTTATATTTATTATGCTTGCTGCTGTTATGTCTGGTTTCCGCTGGT CCATGACTCAGATTCTTCTCCAGAAAGAGGAATACGGATTAAAGAATCCTTTTACCTTGATGAGCCATGTTACCCCAGTA ATGGCAATAGTGACAGCAATTATTTCCATTGTGATGGATCCATGGCACGACTTCAGAGCAAGCCACTTTTTTGATAGTTC TGCTCACATAATAAGAAGCAGCTTGTTGCTGCTTCTAGGTGGCGCTTTGGCCTTTTTCATGGTTTTGACAGAATATGTCC TTGTTTCTGTGACTAGTGCTGTAACAGTTACTGTAGCAGGAATTGTGAAGGAAGCTGTCACTATTCTGGTTGCTGTGCTA TTCTTTCATGATCCATTTACATGGTTAAAGGCGCTTGGGCTGGCAATAATAATATTTGGTGTCAGTCTATTCAATATTTA CAAGTATAAAAGGTTCAAAAAAGGACATCACAATGAAGATACTGGGACAAATATCCAATCTTCCAATGGGACTTCAAAGT ACGTTATCCTTGACGATGATACTGAAGCCCAAGATGATACAGGCTGA |
Sb_3:62828864-62828876:+ does not have available information here.