Microexon ID Sb_3:62828864-62828876:+
Species Sorghum   Bicolor
Coordinates 3:62828864..62828876
Microexon Cluster ID MEP31
Size 13
Phase 0
Pfam Domain Motif TPT
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,13,47
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GCTGTYATGTCTGGKTTYCGYTGGTSYATGACTCARATTCTTYTGCAGAAAGAARMHTAYGGTYTRAARAATCCAYTTACCTTGATGAGYTATGTKACYCCAGTGATG
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq AAAGAGGAATACG
Microexon Amino Acid seq KEEYG
Microexon-tag DNA Seq GCTGTTATGTCTGGTTTCCGCTGGTCCATGACTCAGATTCTTCTCCAGAAAGAGGAATACGGATTAAAGAATCCTTTTACCTTGATGAGCCATGTTACCCCAGTAATG
Microexon-tag Amino Acid Seq AVMSGFRWSMTQILLQKEEYGLKNPFTLMSHVTPVM
Microexon-tag spanning region62828654-62829935
Microexon-tag prediction score0.9827
Overlapped with the annotated transcript (%) 100
New Transcript ID KXG33369x
Reference Transcript ID KXG33369
Gene ID SORBI_3003G296200
Gene Name NA
Transcript ID KXG33369
Protein ID
Gene ID SORBI_3003G296200
Gene Name
Pfam domain motif TPT
Motif E-value 8.70E-31
Motif start 126
Motif end 425
Protein seq >KXG33369
MGDCVVEDGHGHHQSEAVEGAVPLTVAVELDERSGESREEGGGQRKKVGGIRREPSFSRWCRDPSDAAASNTAAAAATSD
SDDSEEFELPLLPSSSGGGSSPMDIEAGATARSDDLPISPRLLAKVIGLIACWYTLSTCLTLYNKEMLGKHMWKFPAPFL
MNTVHFTLQAVASRAIVWFQQRGLEGGPSKMSWKDYCLRVVPTALATALDINLSNISLVFITVTFATMCKSASPIFILLF
AFMFRLEKPSFSLLGIMLVVSFGVLLTVAKETEFNLWGFIFIMLAAVMSGFRWSMTQILLQKEEYGLKNPFTLMSHVTPV
MAIVTAIISIVMDPWHDFRASHFFDSSAHIIRSSLLLLLGGALAFFMVLTEYVLVSVTSAVTVTVAGIVKEAVTILVAVL
FFHDPFTWLKALGLAIIIFGVSLFNIYKYKRFKKGHHNEDTGTNIQSSNGTSKYVILDDDTEAQDDTG*
CDS seq >KXG33369
ATGGGGGACTGCGTTGTCGAGGACGGCCACGGGCACCACCAATCGGAGGCGGTGGAGGGCGCGGTTCCGTTGACGGTAGC
CGTGGAGCTCGATGAGCGGTCGGGAGAGTCGCGGGAGGAGGGTGGCGGGCAGCGGAAGAAGGTTGGTGGGATCCGAAGGG
AGCCGTCGTTCTCGCGGTGGTGCAGGGACCCCTCTGACGCCGCCGCCTCCAATACCGCCGCTGCTGCGGCGACCAGCGAC
AGCGACGACTCAGAGGAGTTCGAGCTGCCGCTCCTGCCATCCTCCTCGGGCGGCGGCAGCTCACCGATGGACATTGAGGC
GGGGGCGACGGCGAGATCTGATGATCTGCCGATCTCGCCGAGGTTGCTTGCGAAGGTCATCGGGTTGATAGCGTGTTGGT
ACACGCTTAGCACATGCTTGACGCTGTACAACAAGGAGATGCTGGGGAAGCACATGTGGAAGTTCCCGGCGCCATTCCTG
ATGAACACAGTGCATTTCACGTTGCAGGCTGTGGCGTCCAGGGCCATCGTGTGGTTCCAGCAACGCGGCCTGGAGGGAGG
GCCAAGTAAAATGTCGTGGAAGGATTACTGTTTACGAGTTGTCCCAACAGCTTTGGCTACTGCTCTTGATATAAATCTGA
GCAACATTTCACTTGTTTTCATTACTGTGACATTTGCTACAATGTGCAAATCGGCTTCTCCAATTTTCATTCTTCTGTTT
GCTTTTATGTTCAGGCTTGAGAAACCGAGCTTTAGCCTTCTTGGAATCATGCTGGTTGTTTCATTTGGAGTTCTACTAAC
AGTTGCTAAAGAGACAGAATTTAATCTGTGGGGATTTATATTTATTATGCTTGCTGCTGTTATGTCTGGTTTCCGCTGGT
CCATGACTCAGATTCTTCTCCAGAAAGAGGAATACGGATTAAAGAATCCTTTTACCTTGATGAGCCATGTTACCCCAGTA
ATGGCAATAGTGACAGCAATTATTTCCATTGTGATGGATCCATGGCACGACTTCAGAGCAAGCCACTTTTTTGATAGTTC
TGCTCACATAATAAGAAGCAGCTTGTTGCTGCTTCTAGGTGGCGCTTTGGCCTTTTTCATGGTTTTGACAGAATATGTCC
TTGTTTCTGTGACTAGTGCTGTAACAGTTACTGTAGCAGGAATTGTGAAGGAAGCTGTCACTATTCTGGTTGCTGTGCTA
TTCTTTCATGATCCATTTACATGGTTAAAGGCGCTTGGGCTGGCAATAATAATATTTGGTGTCAGTCTATTCAATATTTA
CAAGTATAAAAGGTTCAAAAAAGGACATCACAATGAAGATACTGGGACAAATATCCAATCTTCCAATGGGACTTCAAAGT
ACGTTATCCTTGACGATGATACTGAAGCCCAAGATGATACAGGCTGA
Sb_3:62828864-62828876:+ does not have available information here.