
Microexon ID | Sb_10:3293646-3293658:+ |
Species | Sorghum Bicolor | Coordinates | 10:3293646..3293658 |
Microexon Cluster ID | MEP31 |
Size | 13 |
Phase | 0 |
Pfam Domain Motif | TPT |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,13,47 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCTGTYATGTCTGGKTTYCGYTGGTSYATGACTCARATTCTTYTGCAGAAAGAARMHTAYGGTYTRAARAATCCAYTTACCTTGATGAGYTATGTKACYCCAGTGATG |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | AAAGACACTTACG |
Microexon Amino Acid seq | KDTYG |
Microexon-tag DNA Seq | GCTGTTATGTCGGGATTCCGTTGGTCCATGACCCAGATTCTGTTGCAGAAAGACACTTACGGCCTGAAGAATCCAATTACCTTGATGAGCCATGTTACACCAGTGATG |
Microexon-tag Amino Acid Seq | AVMSGFRWSMTQILLQKDTYGLKNPITLMSHVTPVM |
Microexon-tag spanning region | 3293463-3294317 |
Microexon-tag prediction score | 0.9703 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | KXG19328x |
Reference Transcript ID | KXG19328 |
Gene ID | SORBI_3010G042600 |
Gene Name | NA |
Transcript ID | KXG19328 |
Protein ID | |
Gene ID | SORBI_3010G042600 |
Gene Name | |
Pfam domain motif | TPT |
Motif E-value | 2.00E-26 |
Motif start | 91 |
Motif end | 390 |
Protein seq | >KXG19328 MHPKPEGGDADGAAAAEVGSPPPGYFRQRSMHAAAAADPEAAAARRAFDVENPPCSAGGAGGGLRPSESVTKLESLERAE RAALAPAVVLRTGFYILVWYAFSTCLTLYNKTLLGDKLGKFPAPLLMNTVHFALQAGLSKLIIFFQSKGPEAAIEMGWKD YLMRVVPTALGTALDINLSNASLVFISVTFATMCKSASPIFLLLFAFAFRLENPSIKLLGIIVVISTGVLLTVSKETEFD FWGFIFVTLAAVMSGFRWSMTQILLQKDTYGLKNPITLMSHVTPVMAIATMILSLLLDPWSEFQNNSYFDNPWHVVRSCL LMLIGGSLAFFMVLTEYILISATSAITVTIAGVVKEAVTILVAVFYFHDEFTWLKGFGLFTIMVGVSLFNWYKYEKFKRG QTNEDEVNSPPFTGDVKYIILDDLEYQDEFEEEDT* |
CDS seq | >KXG19328 ATGCATCCCAAGCCCGAGGGCGGCGACGCCGACGGGGCCGCCGCCGCGGAGGTGGGATCCCCGCCGCCGGGCTACTTCCG GCAGCGGAGCATGCACGCCGCCGCCGCCGCGGATCCGGAGGCGGCGGCGGCGCGCCGGGCGTTCGACGTCGAGAACCCGC CTTGCTCCGCCGGCGGAGCGGGCGGGGGGCTCCGGCCCAGCGAGTCCGTCACCAAGCTGGAGTCGCTGGAGCGCGCGGAG CGCGCCGCGCTGGCGCCCGCCGTCGTGCTCAGGACCGGGTTCTACATCCTGGTGTGGTACGCGTTCAGCACCTGCCTCAC GCTATATAACAAGACGCTGCTGGGGGATAAGCTCGGCAAGTTCCCGGCGCCGCTGCTGATGAACACCGTGCACTTCGCAC TGCAGGCGGGGCTCTCCAAGCTCATAATCTTCTTCCAGTCCAAGGGGCCCGAGGCCGCCATCGAGATGGGCTGGAAGGAC TACTTGATGAGAGTCGTGCCAACTGCTCTTGGGACGGCCTTGGACATAAACCTGAGCAATGCGTCTCTGGTGTTCATCTC GGTGACGTTTGCTACTATGTGTAAATCAGCCTCCCCGATATTCCTGTTGCTCTTTGCGTTTGCATTTAGGTTGGAGAATC CTAGCATCAAGCTTCTAGGAATTATAGTTGTTATTTCTACTGGAGTTCTGTTGACAGTTTCCAAGGAGACAGAGTTTGAC TTCTGGGGCTTCATTTTTGTGACGCTTGCTGCTGTTATGTCGGGATTCCGTTGGTCCATGACCCAGATTCTGTTGCAGAA AGACACTTACGGCCTGAAGAATCCAATTACCTTGATGAGCCATGTTACACCAGTGATGGCCATAGCCACTATGATACTAT CTCTATTACTGGATCCTTGGAGTGAATTTCAAAATAATTCATATTTCGATAACCCTTGGCATGTTGTGCGCAGTTGCTTA CTCATGCTTATCGGAGGATCCTTAGCTTTTTTCATGGTGTTAACAGAGTATATACTTATTTCAGCAACAAGTGCCATAAC CGTGACGATAGCTGGGGTAGTAAAAGAGGCTGTAACCATTTTGGTTGCAGTATTTTATTTCCATGATGAATTTACTTGGT TGAAAGGGTTTGGTCTGTTCACCATCATGGTTGGTGTTAGCTTGTTCAATTGGTACAAGTATGAGAAATTCAAAAGGGGT CAGACAAATGAGGATGAAGTCAACTCTCCTCCATTTACTGGTGACGTCAAGTACATTATTCTAGATGACTTGGAATATCA GGATGAATTTGAGGAGGAAGATACATAA |
Sb_10:3293646-3293658:+ does not have available information here.