
Microexon ID | Ps_NC_039363.1:28189380-28189392:- |
Species | Papaver somniferum | Coordinates | NC_039363.1:28189380..28189392 |
Microexon Cluster ID | MEP31 |
Size | 13 |
Phase | 0 |
Pfam Domain Motif | TPT |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,13,47 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCTGTYATGTCTGGKTTYCGYTGGTSYATGACTCARATTCTTYTGCAGAAAGAARMHTAYGGTYTRAARAATCCAYTTACCTTGATGAGYTATGTKACYCCAGTGATG |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | AAAGAAACTTATG |
Microexon Amino Acid seq | KETYG |
Microexon-tag DNA Seq | GCTGTCATGTCTGGGTTTCGCTGGTCCATGACTCAGATTCTTTTGCAGAAAGAAACTTATGGTCTAAAGAACCCACTTACTCTGATGAGCTATGTTACTCCAGTTATG |
Microexon-tag Amino Acid Seq | AVMSGFRWSMTQILLQKETYGLKNPLTLMSYVTPVM |
Microexon-tag spanning region | 28189111-28189644 |
Microexon-tag prediction score | 0.9793 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026535897.1x |
Reference Transcript ID | XM_026535897.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026535897.1 |
Protein ID | XP_026391682.1 |
Gene ID | LOC113287212 |
Gene Name | NA |
Pfam domain motif | TPT |
Motif E-value | 2.9e-30 |
Motif start | 160 |
Motif end | 459 |
Protein seq | >XP_026391682.1 MVDSNLEVEKDDAIELQDIQKESDRPVLRREPSFSRWFDEDGIIHFHRPSEHADETVEDSDFELPFLQTEGQESKLLSKD RLSNPRNMHLNGNHTMPMVRTHNHVDENTNGLNYVPFDIENESIRELPVSDFDAHDSSSRGSYKTTLDTQNSLDMAIVLK TLFFILVWYTFSTCLTIYNKTLLGEKLGKFPAPMLMNTIHFGMQAVLSNFITWFWSNRFQPTVTMSWKDYFMRVVPTALG TALDINLSNASLVFISVTFATMCKSASPIFLLLFAFAFKLESPSVKLLGIISVISVGILLTVAKETEFQFWGFVFVMLAA VMSGFRWSMTQILLQKETYGLKNPLTLMSYVTPVMAVATAILSLAMDPWDEFRKNIYFDSSWHVFRSALLMFLGGTLAFF MVLTEYILVSATSAVTVTIAGVVKEVVTILVAVFYFHDKFTWLKGVGLFIIIFGVSLFNWYKYQKHQECQTSVIDESGLS PKNVAAKYVILEEMEDHHVDT* |
CDS seq | >XM_026535897.1 ATGGTAGACAGTAATCTGGAGGTGGAAAAGGATGATGCAATTGAGCTTCAAGATATTCAAAAAGAAAGTGACAGACCGGT TCTTCGAAGGGAACCATCTTTCTCACGCTGGTTTGACGAGGACGGCATCATTCATTTCCATCGTCCTTCGGAGCATGCTG ATGAAACTGTAGAAGACTCTGATTTTGAGTTGCCGTTTCTTCAAACTGAAGGACAAGAGAGCAAATTATTGAGTAAGGAC AGACTGTCTAATCCGAGAAACATGCACCTGAATGGGAATCACACCATGCCCATGGTTAGGACTCATAATCATGTGGATGA AAATACAAATGGACTGAACTATGTGCCATTTGACATTGAAAATGAGTCTATTCGAGAATTGCCTGTTTCAGATTTTGATG CCCATGACTCCAGTTCAAGAGGAAGCTATAAAACGACACTGGATACACAGAATTCTCTTGATATGGCCATTGTGCTCAAG ACATTGTTTTTCATACTCGTATGGTACACTTTCAGTACATGTTTGACAATTTATAACAAAACATTATTAGGAGAAAAGTT GGGTAAATTCCCGGCTCCCATGTTGATGAATACTATCCACTTTGGGATGCAAGCTGTTCTATCGAATTTTATTACATGGT TTTGGTCTAACAGATTTCAACCCACAGTAACAATGTCATGGAAGGATTACTTCATGAGAGTTGTTCCCACGGCTCTTGGA ACTGCACTGGACATAAACCTGAGCAATGCCTCTCTTGTGTTCATCTCTGTCACATTTGCGACCATGTGTAAATCAGCATC TCCTATATTTCTACTTCTATTTGCTTTTGCATTCAAGTTGGAGTCTCCAAGTGTTAAACTTCTTGGCATCATATCAGTCA TCTCTGTTGGAATTTTGTTAACAGTTGCAAAGGAAACAGAGTTTCAATTTTGGGGATTCGTATTTGTTATGCTTGCTGCT GTCATGTCTGGGTTTCGCTGGTCCATGACTCAGATTCTTTTGCAGAAAGAAACTTATGGTCTAAAGAACCCACTTACTCT GATGAGCTATGTTACTCCAGTTATGGCTGTGGCAACTGCTATACTCTCTCTTGCTATGGATCCATGGGATGAATTCAGAA AGAATATTTACTTTGATAGTTCATGGCATGTCTTTCGAAGTGCATTGTTGATGTTTCTTGGCGGAACGCTAGCCTTCTTT ATGGTTTTAACAGAATACATTCTTGTCTCAGCAACCAGTGCAGTAACCGTAACAATTGCAGGAGTCGTCAAGGAAGTTGT CACTATTTTGGTTGCGGTGTTTTACTTCCATGACAAATTTACCTGGTTGAAGGGAGTTGGGCTCTTCATAATAATCTTTG GTGTCAGTTTATTCAACTGGTACAAATATCAAAAGCATCAAGAATGCCAAACTAGTGTAATTGATGAATCTGGGTTATCA CCCAAAAATGTAGCTGCGAAGTATGTTATCCTTGAGGAGATGGAGGATCACCATGTCGATACTTGA |
Microexon DNA seq | AAAGAAACTTATG |
Microexon Amino Acid seq | KETYG |
Microexon-tag DNA Seq | GCTGTCATGTCTGGGTTTCGCTGGTCCATGACTCAGATTCTTTTGCAGAAAGAAACTTATGGTCTAAAGAACCCACTTACTCTGATGAGCTATGTTACTCCAGTTATG |
Microexon-tag Amino Acid seq | AVMSGFRWSMTQILLQKETYGLKNPLTLMSYVTPVM |
Transcript ID | Ps.35034.1 |
Gene ID | Ps.35034 |
Gene Name | NA |
Pfam domain motif | TPT |
Motif E-value | 6.2e-21 |
Motif start | 11 |
Motif end | 240 |
Protein seq | >Ps.35034.1 MEGLLHERWTFPLTVVPTALGTALDINLSNASLVFISVTFATMCKSASPIFLLLFAFAFKLESPSVKLLGIISVISVGIL LTVAKETEFQFWGFVFVMLAAVMSGFRWSMTQILLQKETYGLKNPLTLMSYVTPVMAVATAILSLAMDPWDEFRKNIYFD SSWHVFRSALLMFLGGTLAFFMVLTEYILVSATSAVTVTIAGVVKEVVTILVAVFYFHDKFTWLKGVGLFIIIFGVSLFN WYKYQKHQECQTSVIDESGLSPKNVAAKYVILEEMEDHHVDT* |
CDS seq | >Ps.35034.1 ATGGAAGGATTACTTCATGAGAGATGGACTTTCCCTTTAACAGTTGTTCCCACGGCTCTTGGAACTGCACTGGACATAAA CCTGAGCAATGCCTCTCTTGTGTTCATCTCTGTCACATTTGCGACCATGTGTAAATCAGCATCTCCTATATTTCTACTTC TATTTGCTTTTGCATTCAAGTTGGAGTCTCCAAGTGTTAAACTTCTTGGCATCATATCAGTCATCTCTGTTGGAATTTTG TTAACAGTTGCAAAGGAAACAGAGTTTCAATTTTGGGGATTCGTATTTGTTATGCTTGCTGCTGTCATGTCTGGGTTTCG CTGGTCCATGACTCAGATTCTTTTGCAGAAAGAAACTTATGGTCTAAAGAACCCACTTACTCTGATGAGCTATGTTACTC CAGTTATGGCTGTGGCAACTGCTATACTCTCTCTTGCTATGGATCCATGGGATGAATTCAGAAAGAATATTTACTTTGAT AGTTCATGGCATGTCTTTCGAAGTGCATTGTTGATGTTTCTTGGCGGAACGCTAGCCTTCTTTATGGTTTTAACAGAATA CATTCTTGTCTCAGCAACCAGTGCAGTAACCGTAACAATTGCAGGAGTCGTCAAGGAAGTTGTCACTATTTTGGTTGCGG TGTTTTACTTCCATGACAAATTTACCTGGTTGAAGGGAGTTGGGCTCTTCATAATAATCTTTGGTGTCAGTTTATTCAAC TGGTACAAATATCAAAAGCATCAAGAATGCCAAACTAGTGTAATTGATGAATCTGGGTTATCACCCAAAAATGTAGCTGC GAAGTATGTTATCCTTGAGGAGATGGAGGATCACCATGTCGATACTTGA |