
Microexon ID | Os_6:2746196-2746208:+ |
Species | Oryza sativa | Coordinates | 6:2746196..2746208 |
Microexon Cluster ID | MEP31 |
Size | 13 |
Phase | 0 |
Pfam Domain Motif | TPT |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,13,47 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCTGTYATGTCTGGKTTYCGYTGGTSYATGACTCARATTCTTYTGCAGAAAGAARMHTAYGGTYTRAARAATCCAYTTACCTTGATGAGYTATGTKACYCCAGTGATG |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | AAAGATTCTTATG |
Microexon Amino Acid seq | KDSYG |
Microexon-tag DNA Seq | GCTGTTATGTCAGGATTTCGCTGGTCCATGACTCAGATACTGTTGCAAAAAGATTCTTATGGTCTAAAAAATCCAATCACCCTGATGAGTCATGTAACCCCAGTGATG |
Microexon-tag Amino Acid Seq | AVMSGFRWSMTQILLQKDSYGLKNPITLMSHVTPVM |
Microexon-tag spanning region | 2746028-2746787 |
Microexon-tag prediction score | 0.9594 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Os06t0153200-01x |
Reference Transcript ID | Os06t0153200-01 |
Gene ID | Os06g0153200 |
Gene Name | NA |
Transcript ID | Os06t0153200-01 |
Protein ID | NA |
Gene ID | Os06g0153200 |
Gene Name | NA |
Pfam domain motif | NA |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | |
CDS seq |
Microexon DNA seq | AAAGATTCTTATG |
Microexon Amino Acid seq | KDSYG |
Microexon-tag DNA Seq | GCTGTTATGTCAGGATTTCGCTGGTCCATGACTCAGATACTGTTGCAAAAAGATTCTTATGGTCTAAAAAATCCAATCACCCTGATGAGTCATGTAACCCCAGTGATG |
Microexon-tag Amino Acid seq | AVMSGFRWSMTQILLQKDSYGLKNPITLMSHVTPVM |
Transcript ID | Os06t0153200-01 |
Gene ID | Os.28309 |
Gene Name | NA |
Pfam domain motif | TPT |
Motif E-value | 1.6e-19 |
Motif start | 11 |
Motif end | 236 |
Protein seq | >Os06t0153200-01 MEGLLHERFVFVPTALGTALDINLSNASLVFISVTFATMCKSASPIFLLMFAFAFRLESPSIKLLGIIVVISTGVLLTVS KETEFDFWGFIFVTLAAVMSGFRWSMTQILLQKDSYGLKNPITLMSHVTPVMAIATMVLSLLMDPWSDFQKNTYFDSPWH VMRSFLLMLVGGTLAFFMVLTEYVLVSATSAITVTIAGVVKEAVTILVAVFYFHDEFTWLKGLGLATIMVGVSLFNWYKY EKYKKGHINEDEVNSPSFDGDAKYIILDDLEDQDEFQDEDT* |
CDS seq | >Os06t0153200-01 ATGGAAGGATTACTTCATGAGAGGTTTGTATTCGTGCCAACTGCTCTGGGAACAGCATTGGACATCAACCTGAGCAATGC GTCTCTAGTGTTTATCTCGGTGACATTTGCTACCATGTGTAAATCAGCCTCCCCGATATTTCTTTTGATGTTTGCTTTTG CATTTAGGTTGGAGAGTCCCAGCATCAAGCTTCTAGGAATAATTGTAGTTATCTCTACTGGGGTTCTCTTGACAGTTTCA AAGGAGACTGAGTTTGACTTCTGGGGATTCATTTTTGTGACACTTGCCGCTGTTATGTCAGGATTTCGCTGGTCCATGAC TCAGATACTGTTGCAAAAAGATTCTTATGGTCTAAAAAATCCAATCACCCTGATGAGTCATGTAACCCCAGTGATGGCCA TAGCCACCATGGTACTCTCTCTCTTAATGGATCCTTGGAGCGATTTTCAGAAGAACACATATTTTGATAGCCCGTGGCAT GTCATGCGCAGTTTTTTACTTATGCTTGTTGGAGGAACCTTGGCCTTTTTCATGGTGTTAACAGAGTATGTACTTGTTTC AGCAACCAGTGCTATAACTGTGACAATAGCTGGGGTAGTAAAAGAAGCTGTAACCATCTTGGTCGCAGTATTTTATTTCC ATGATGAGTTCACTTGGTTGAAAGGGCTTGGTCTCGCCACCATCATGGTTGGAGTTAGCTTATTCAATTGGTACAAGTAT GAGAAATACAAAAAGGGTCACATAAATGAGGATGAAGTTAATTCACCTTCATTCGATGGAGATGCCAAATACATCATTCT AGATGACTTGGAGGACCAGGATGAGTTTCAGGATGAAGATACATAA |