Microexon ID Os_6:2746196-2746208:+
Species Oryza sativa
Coordinates 6:2746196..2746208
Microexon Cluster ID MEP31
Size 13
Phase 0
Pfam Domain Motif TPT
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,13,47
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GCTGTYATGTCTGGKTTYCGYTGGTSYATGACTCARATTCTTYTGCAGAAAGAARMHTAYGGTYTRAARAATCCAYTTACCTTGATGAGYTATGTKACYCCAGTGATG
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq AAAGATTCTTATG
Microexon Amino Acid seq KDSYG
Microexon-tag DNA Seq GCTGTTATGTCAGGATTTCGCTGGTCCATGACTCAGATACTGTTGCAAAAAGATTCTTATGGTCTAAAAAATCCAATCACCCTGATGAGTCATGTAACCCCAGTGATG
Microexon-tag Amino Acid Seq AVMSGFRWSMTQILLQKDSYGLKNPITLMSHVTPVM
Microexon-tag spanning region2746028-2746787
Microexon-tag prediction score0.9594
Overlapped with the annotated transcript (%) 100
New Transcript ID Os06t0153200-01x
Reference Transcript ID Os06t0153200-01
Gene ID Os06g0153200
Gene Name NA
Transcript ID Os06t0153200-01
Protein ID NA
Gene ID Os06g0153200
Gene Name NA
Pfam domain motif NA
Motif E-value NA
Motif start NA
Motif end NA
Protein seq
CDS seq
Microexon DNA seq AAAGATTCTTATG
Microexon Amino Acid seq KDSYG
Microexon-tag DNA Seq GCTGTTATGTCAGGATTTCGCTGGTCCATGACTCAGATACTGTTGCAAAAAGATTCTTATGGTCTAAAAAATCCAATCACCCTGATGAGTCATGTAACCCCAGTGATG
Microexon-tag Amino Acid seq AVMSGFRWSMTQILLQKDSYGLKNPITLMSHVTPVM
Transcript ID Os06t0153200-01
Gene ID Os.28309
Gene Name NA
Pfam domain motif TPT
Motif E-value 1.6e-19
Motif start 11
Motif end 236
Protein seq >Os06t0153200-01
MEGLLHERFVFVPTALGTALDINLSNASLVFISVTFATMCKSASPIFLLMFAFAFRLESPSIKLLGIIVVISTGVLLTVS
KETEFDFWGFIFVTLAAVMSGFRWSMTQILLQKDSYGLKNPITLMSHVTPVMAIATMVLSLLMDPWSDFQKNTYFDSPWH
VMRSFLLMLVGGTLAFFMVLTEYVLVSATSAITVTIAGVVKEAVTILVAVFYFHDEFTWLKGLGLATIMVGVSLFNWYKY
EKYKKGHINEDEVNSPSFDGDAKYIILDDLEDQDEFQDEDT*
CDS seq >Os06t0153200-01
ATGGAAGGATTACTTCATGAGAGGTTTGTATTCGTGCCAACTGCTCTGGGAACAGCATTGGACATCAACCTGAGCAATGC
GTCTCTAGTGTTTATCTCGGTGACATTTGCTACCATGTGTAAATCAGCCTCCCCGATATTTCTTTTGATGTTTGCTTTTG
CATTTAGGTTGGAGAGTCCCAGCATCAAGCTTCTAGGAATAATTGTAGTTATCTCTACTGGGGTTCTCTTGACAGTTTCA
AAGGAGACTGAGTTTGACTTCTGGGGATTCATTTTTGTGACACTTGCCGCTGTTATGTCAGGATTTCGCTGGTCCATGAC
TCAGATACTGTTGCAAAAAGATTCTTATGGTCTAAAAAATCCAATCACCCTGATGAGTCATGTAACCCCAGTGATGGCCA
TAGCCACCATGGTACTCTCTCTCTTAATGGATCCTTGGAGCGATTTTCAGAAGAACACATATTTTGATAGCCCGTGGCAT
GTCATGCGCAGTTTTTTACTTATGCTTGTTGGAGGAACCTTGGCCTTTTTCATGGTGTTAACAGAGTATGTACTTGTTTC
AGCAACCAGTGCTATAACTGTGACAATAGCTGGGGTAGTAAAAGAAGCTGTAACCATCTTGGTCGCAGTATTTTATTTCC
ATGATGAGTTCACTTGGTTGAAAGGGCTTGGTCTCGCCACCATCATGGTTGGAGTTAGCTTATTCAATTGGTACAAGTAT
GAGAAATACAAAAAGGGTCACATAAATGAGGATGAAGTTAATTCACCTTCATTCGATGGAGATGCCAAATACATCATTCT
AGATGACTTGGAGGACCAGGATGAGTTTCAGGATGAAGATACATAA