
Microexon ID | Ha_1:146422881-146422893:- |
Species | Helianthus annuus | Coordinates | 1:146422881..146422893 |
Microexon Cluster ID | MEP31 |
Size | 13 |
Phase | 0 |
Pfam Domain Motif | TPT |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,13,47 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCTGTYATGTCTGGKTTYCGYTGGTSYATGACTCARATTCTTYTGCAGAAAGAARMHTAYGGTYTRAARAATCCAYTTACCTTGATGAGYTATGTKACYCCAGTGATG |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | AAAGAGGTCTATG |
Microexon Amino Acid seq | KEVYG |
Microexon-tag DNA Seq | GCTGTTATGTCGGGTTTTCGTTGGACCATGACTCAGATCCTTCTTCAGAAAGAGGTCTATGGTTTGAAAAATCCCCTGACGTTAATGAGCTATGTAACCCCTGTTATG |
Microexon-tag Amino Acid Seq | AVMSGFRWTMTQILLQKEVYGLKNPLTLMSYVTPVM |
Microexon-tag spanning region | 146422707-146423336 |
Microexon-tag prediction score | 0.961 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | OTG38338x |
Reference Transcript ID | OTG38338 |
Gene ID | HannXRQ_Chr01g0028621 |
Gene Name | NA |
Transcript ID | OTG38338 |
Protein ID | OTG38338 |
Gene ID | HannXRQ_Chr01g0028621 |
Gene Name | NA |
Pfam domain motif | TPT |
Motif E-value | 4e-31 |
Motif start | 67 |
Motif end | 366 |
Protein seq | >OTG38338 MSGGSSTEMVSAASPRRTHTNEKRVSFDIENDTNGGLKYSNTTDFVDRNREGLASNKSPIVVVDILKTLFFILVWYTFSI LLTLYNKKLLGDDQGKFPAPLLMNTIHFGMQAVFSKAIVYFWSERFQPTVTMSWKDYFMRVVPTAIGTALDINLSNASLV FISVTFATMCKSAAPIFLLIFAFAFRLESPSFKLLGIMLIISAGVLLTVAKETEFDLWGFIFVMLAAVMSGFRWTMTQIL LQKEVYGLKNPLTLMSYVTPVMALLTALLSLILDPWGEFRTSSYFDSKLHIMRSCFLMLFGGTLAFFMVLTEYILVSVTS AVTVTIAGIVKEAVTILVAVFYFHDEFTWLKGGGLVTIIFGVSLFNLYKYQKLHNEKSSPDELAGSQTSVHAKYVILEEM DDEETEETRP* |
CDS seq | >OTG38338 ATGAGTGGTGGTAGCAGTACTGAAATGGTTTCTGCTGCTAGCCCGAGAAGAACACACACAAACGAGAAACGGGTTTCTTT CGATATTGAAAATGATACAAACGGAGGGTTGAAATATTCAAACACAACAGATTTTGTTGATAGAAATAGAGAGGGTTTGG CAAGCAACAAGAGCCCGATTGTCGTTGTCGATATACTCAAAACGTTGTTTTTTATACTCGTTTGGTACACATTCAGCATA TTACTCACATTGTATAATAAGAAACTATTGGGAGATGATCAGGGGAAATTCCCTGCTCCTTTGTTAATGAATACGATTCA TTTTGGAATGCAAGCCGTTTTTTCAAAGGCGATTGTATACTTTTGGTCCGAAAGATTCCAACCGACAGTAACTATGTCAT GGAAAGACTACTTTATGAGAGTTGTGCCAACTGCTATTGGAACAGCACTGGATATAAATTTGAGCAATGCATCACTCGTT TTCATATCGGTTACATTTGCAACCATGTGTAAATCTGCTGCTCCTATATTTCTCCTTATATTTGCTTTTGCATTCAGGTT GGAATCTCCAAGTTTTAAACTTTTAGGCATTATGTTGATAATATCTGCTGGAGTTTTATTAACAGTTGCAAAAGAGACCG AATTTGATTTGTGGGGTTTCATTTTTGTTATGCTTGCTGCTGTTATGTCGGGTTTTCGTTGGACCATGACTCAGATCCTT CTTCAGAAAGAGGTCTATGGTTTGAAAAATCCCCTGACGTTAATGAGCTATGTAACCCCTGTTATGGCCCTATTAACCGC TTTGCTATCGCTAATTTTGGATCCTTGGGGCGAATTTAGAACTAGCAGTTATTTTGATAGTAAATTGCATATCATGAGGA GTTGCTTCTTGATGCTCTTTGGGGGAACTCTTGCCTTTTTTATGGTATTAACAGAGTACATCCTTGTATCTGTGACAAGT GCAGTTACAGTTACCATAGCAGGAATCGTAAAGGAAGCTGTCACTATTCTGGTAGCAGTATTTTATTTCCATGATGAATT TACATGGCTGAAAGGAGGTGGTCTTGTCACCATCATTTTTGGTGTGAGTTTGTTCAACTTGTACAAATATCAGAAGTTGC ACAACGAAAAATCGAGTCCGGATGAGCTGGCGGGATCTCAAACCTCAGTCCATGCAAAATATGTTATTCTGGAGGAAATG GACGATGAAGAAACCGAAGAAACTAGACCTTGA |
Microexon DNA seq | AAAGAGGTCTATG |
Microexon Amino Acid seq | KEVYG |
Microexon-tag DNA Seq | GCTGTTATGTCGGGTTTTCGTTGGACCATGACTCAGATCCTTCTTCAGAAAGAGGTCTATGGTTTGAAAAATCCCCTGACGTTAATGAGCTATGTAACCCCTGTTATG |
Microexon-tag Amino Acid seq | AVMSGFRWTMTQILLQKEVYGLKNPLTLMSYVTPVM |
Transcript ID | Ha.2929.1 |
Gene ID | Ha.2929 |
Gene Name | NA |
Pfam domain motif | TPT |
Motif E-value | 4e-31 |
Motif start | 67 |
Motif end | 366 |
Protein seq | >Ha.2929.1 MSGGSSTEMVSAASPRRTHTNEKRVSFDIENDTNGGLKYSNTTDFVDRNREGLASNKSPIVVVDILKTLFFILVWYTFSI LLTLYNKKLLGDDQGKFPAPLLMNTIHFGMQAVFSKAIVYFWSERFQPTVTMSWKDYFMRVVPTAIGTALDINLSNASLV FISVTFATMCKSAAPIFLLIFAFAFRLESPSFKLLGIMLIISAGVLLTVAKETEFDLWGFIFVMLAAVMSGFRWTMTQIL LQKEVYGLKNPLTLMSYVTPVMALLTALLSLILDPWGEFRTSSYFDSKLHIMRSCFLMLFGGTLAFFMVLTEYILVSVTS AVTVTIAGIVKEAVTILVAVFYFHDEFTWLKGGGLVTIIFGVSLFNLYKYQKLHNEKSSPDELAGSQTSVHAKYVILEEM DDEETEETRP* |
CDS seq | >Ha.2929.1 ATGAGTGGTGGTAGCAGTACTGAAATGGTTTCTGCTGCTAGCCCGAGAAGAACACACACAAACGAGAAACGGGTTTCTTT CGATATTGAAAATGATACAAACGGAGGGTTGAAATATTCAAACACAACAGATTTTGTTGATAGAAATAGAGAGGGTTTGG CAAGCAACAAGAGCCCGATTGTCGTTGTCGATATACTCAAAACGTTGTTTTTTATACTCGTTTGGTACACATTCAGCATA TTACTCACATTGTATAATAAGAAACTATTGGGAGATGATCAGGGGAAATTCCCTGCTCCTTTGTTAATGAATACGATTCA TTTTGGAATGCAAGCCGTTTTTTCAAAGGCGATTGTATACTTTTGGTCCGAAAGATTCCAACCGACAGTAACTATGTCAT GGAAAGACTACTTTATGAGAGTTGTGCCAACTGCTATTGGAACAGCACTGGATATAAATTTGAGCAATGCATCACTCGTT TTCATATCGGTTACATTTGCAACCATGTGTAAATCTGCTGCTCCTATATTTCTCCTTATATTTGCTTTTGCATTCAGGTT GGAATCTCCAAGTTTTAAACTTTTAGGCATTATGTTGATAATATCTGCTGGAGTTTTATTAACAGTTGCAAAAGAGACCG AATTTGATTTGTGGGGTTTCATTTTTGTTATGCTTGCTGCTGTTATGTCGGGTTTTCGTTGGACCATGACTCAGATCCTT CTTCAGAAAGAGGTCTATGGTTTGAAAAATCCCCTGACGTTAATGAGCTATGTAACCCCTGTTATGGCCCTATTAACCGC TTTGCTATCGCTAATTTTGGATCCTTGGGGCGAATTTAGAACTAGCAGTTATTTTGATAGTAAATTGCATATCATGAGGA GTTGCTTCTTGATGCTCTTTGGGGGAACTCTTGCCTTTTTTATGGTATTAACAGAGTACATCCTTGTATCTGTGACAAGT GCAGTTACAGTTACCATAGCAGGAATCGTAAAGGAAGCTGTCACTATTCTGGTAGCAGTATTTTATTTCCATGATGAATT TACATGGCTGAAAGGAGGTGGTCTTGTCACCATCATTTTTGGTGTGAGTTTGTTCAACTTGTACAAATATCAGAAGTTGC ACAACGAAAAATCGAGTCCGGATGAGCTGGCGGGATCTCAAACCTCAGTCCATGCAAAATATGTTATTCTGGAGGAAATG GACGATGAAGAAACCGAAGAAACTAGACCTTGA |