| Microexon ID | Bn_scaffoldC05:2730009-2730021:+ |
| Species | Brassica Napus | Coordinates | scaffoldC05:2730009..2730021 |
| Microexon Cluster ID | MEP31 |
| Size | 13 |
| Phase | 0 |
| Pfam Domain Motif | TPT |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,13,47 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | GCTGTYATGTCTGGKTTYCGYTGGTSYATGACTCARATTCTTYTGCAGAAAGAARMHTAYGGTYTRAARAATCCAYTTACCTTGATGAGYTATGTKACYCCAGTGATG |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | AAAGAAACCTATG |
| Microexon Amino Acid seq | KETYG |
| Microexon-tag DNA Seq | GCCGTCATGTCTGGTTTCCGTTGGTGTATGACCCAAGTTCTTTTGCAGAAAGAAACCTATGGCCTGAAAAATCCATTCACATTTATGAGTTGCGTGGCACCAGTGATG |
| Microexon-tag Amino Acid Seq | AVMSGFRWCMTQVLLQKETYGLKNPFTFMSCVAPVM |
| Microexon-tag spanning region | 2729840-2730167 |
| Microexon-tag prediction score | 0.9573 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | BnaC05T0046400ZSx |
| Reference Transcript ID | BnaC05T0046400ZS |
| Gene ID | BnaC05G0046400ZS |
| Gene Name | NA |
| Transcript ID | BnaC05T0046400ZS |
| Protein ID | |
| Gene ID | BnaC05G0046400ZS |
| Gene Name | |
| Pfam domain motif | TPT |
| Motif E-value | 3.00E-29 |
| Motif start | 75 |
| Motif end | 374 |
| Protein seq | >BnaC05T0046400ZS MEQRVHLRGGGTLEVISSQGDVDREQVLEPFDIENETSKETNRSSSFDVGYSSGDNLETLPTPSKDAISPADILKTLFFI LVWYTFSTFLTLYNKTLLGDDLGKFPAPLLMNTIHFSIQAVLSKMITWYWSGRFQPDVTMSWRDYFIRVVPTALATALDI NLSNESLVFISVTFATMCKSAAPIFLLLFAFAFRLESPSLKLFGIISVISAGVLLSVAKETEFEFWGFIFVMLAAVMSGF RWCMTQVLLQKETYGLKNPFTFMSCVAPVMAIVTGLLSLLLDPWSEFRENRYFDNGEHFARTCFLMLFGGALAFFMVLTE YVLVSVTSAVTVTIAGVVKEAVTIVVAVFYFHDEFTWLKGFGLMIIMVGVSLFNLYKYDKLQKGHKTEDEKQLQAPSQTG KYVILDETDDPENGP* |
| CDS seq | >BnaC05T0046400ZS ATGGAGCAAAGAGTGCATCTACGTGGTGGTGGCACACTTGAAGTTATATCTAGTCAGGGGGATGTAGACAGAGAACAGGT TTTAGAGCCGTTTGATATTGAAAACGAAACCAGCAAGGAGACAAACCGCTCCAGCAGTTTTGATGTTGGTTACAGTTCCG GTGATAACCTCGAAACGTTGCCTACACCCTCCAAAGATGCTATCTCTCCAGCCGACATCCTAAAAACACTATTCTTTATA CTTGTCTGGTACACTTTCAGCACATTTTTGACTCTGTACAACAAAACTCTCTTAGGAGATGATTTGGGGAAATTTCCTGC TCCCTTGTTAATGAATACCATTCATTTTTCTATTCAAGCGGTTTTATCAAAGATGATAACATGGTACTGGTCGGGAAGAT TTCAACCTGATGTTACCATGTCATGGAGAGACTATTTCATTAGAGTTGTACCAACAGCACTTGCAACTGCTTTGGATATA AACCTAAGTAACGAGTCACTTGTCTTCATATCGGTTACGTTTGCAACAATGTGCAAATCAGCAGCCCCAATATTTCTTCT TCTGTTTGCTTTTGCCTTCAGGCTGGAGTCTCCAAGCCTGAAACTTTTTGGCATTATTTCAGTTATCTCAGCAGGAGTGT TGTTATCAGTTGCAAAGGAGACGGAATTTGAGTTTTGGGGTTTCATTTTTGTCATGCTTGCTGCCGTCATGTCTGGTTTC CGTTGGTGTATGACCCAAGTTCTTTTGCAGAAAGAAACCTATGGCCTGAAAAATCCATTCACATTTATGAGTTGCGTGGC ACCAGTGATGGCTATAGTGACTGGTCTTCTTTCTCTCCTTCTGGATCCATGGAGTGAATTTAGAGAGAACAGATACTTTG ATAATGGAGAGCATTTTGCTCGAACTTGTTTCTTGATGCTTTTTGGTGGAGCACTAGCTTTTTTCATGGTGTTAACAGAG TATGTTCTTGTTTCGGTGACCAGTGCTGTAACCGTCACAATAGCGGGCGTCGTTAAAGAGGCTGTCACCATAGTGGTTGC AGTGTTTTACTTCCATGACGAATTTACGTGGCTGAAAGGTTTTGGTCTGATGATTATCATGGTTGGCGTCAGTTTGTTCA ACTTGTACAAATATGATAAACTACAAAAGGGACACAAGACAGAAGATGAGAAGCAGCTACAAGCTCCGAGTCAAACTGGA AAATATGTGATTCTTGATGAGACGGATGATCCAGAAAATGGGCCTTGA |
Bn_scaffoldC05:2730009-2730021:+ does not have available information here.