| Microexon ID | Bn_scaffoldA10:2850505-2850517:+ |
| Species | Brassica Napus | Coordinates | scaffoldA10:2850505..2850517 |
| Microexon Cluster ID | MEP31 |
| Size | 13 |
| Phase | 0 |
| Pfam Domain Motif | TPT |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,13,47 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | GCTGTYATGTCTGGKTTYCGYTGGTSYATGACTCARATTCTTYTGCAGAAAGAARMHTAYGGTYTRAARAATCCAYTTACCTTGATGAGYTATGTKACYCCAGTGATG |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | AAAGAAACGTATG |
| Microexon Amino Acid seq | KETYG |
| Microexon-tag DNA Seq | GCTGTCATGTCTGGTTTTCGTTGGTGTATGACCCAAGTTCTTTTGCAGAAAGAAACGTATGGCCTGAAAAATCCATTCACATTTATGAGTTGCGTGGCACCAGTGATG |
| Microexon-tag Amino Acid Seq | AVMSGFRWCMTQVLLQKETYGLKNPFTFMSCVAPVM |
| Microexon-tag spanning region | 2850341-2850670 |
| Microexon-tag prediction score | 0.9551 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | BnaA10T0045900ZSx |
| Reference Transcript ID | BnaA10T0045900ZS |
| Gene ID | BnaA10G0045900ZS |
| Gene Name | NA |
| Transcript ID | BnaA10T0045900ZS |
| Protein ID | |
| Gene ID | BnaA10G0045900ZS |
| Gene Name | |
| Pfam domain motif | TPT |
| Motif E-value | 4.80E-29 |
| Motif start | 76 |
| Motif end | 375 |
| Protein seq | >BnaA10T0045900ZS MEQRVHLRGGGTLEVISSQGDVDREQVLEPFDIENETCKETNRSSSFDVGYSSGANTLQTLPTPSKDAISPADILKTLFF ILVWYTFSTFLTLYNKTLLGDDLGKFPAPLLMNTIHFSIQAVLSKMITWYWSGRFQPDVTMSWRDYFIRVVPTALATALD INLSNESLVFISVTFATMCKSAAPIFLLLFAFAFRLESPSLKLFGIISVISAGVLLSVAKETEFEFWGFVFVMLAAVMSG FRWCMTQVLLQKETYGLKNPFTFMSCVAPVMAIVTGLLSLLLDPWSEFRENRYFDNGEHFARTCFLMLFGGALAFFMVLT EYVLVSVTSAVTVTIAGVVKEAVTIVVAVFYFHDEFTWLKGFGLMIIMVGVSLFNWYKYDKLQKGHRTEDEKQLQSPSQT GKYVILDERDDQEDGP* |
| CDS seq | >BnaA10T0045900ZS ATGGAGCAAAGAGTGCATCTACGCGGTGGTGGCACACTTGAAGTTATATCTAGTCAGGGAGATGTAGACAGAGAACAGGT TTTAGAGCCGTTTGATATTGAAAACGAAACCTGCAAGGAGACAAACCGCTCCAGCAGTTTTGATGTTGGTTACAGTTCCG GTGCTAACACCCTCCAAACGTTGCCTACACCCTCCAAAGATGCTATCTCTCCAGCCGACATCCTAAAAACACTATTCTTT ATACTTGTATGGTACACTTTCAGCACATTTTTGACTCTGTACAACAAAACTCTCTTAGGAGATGATTTGGGGAAGTTTCC TGCTCCCTTGTTAATGAATACCATTCATTTTTCTATTCAAGCGGTTTTGTCAAAGATGATAACGTGGTACTGGTCGGGAA GATTTCAACCTGATGTTACCATGTCATGGAGAGACTATTTCATTAGAGTTGTACCAACAGCACTTGCAACTGCTTTGGAT ATAAACCTAAGTAACGAGTCACTTGTCTTCATATCGGTTACGTTTGCAACAATGTGCAAATCAGCAGCCCCAATATTTCT TCTTTTGTTTGCTTTTGCCTTCAGGCTGGAGTCTCCAAGCCTGAAACTTTTTGGCATTATTTCAGTTATCTCAGCCGGAG TGTTGTTATCAGTTGCAAAGGAGACAGAATTTGAGTTTTGGGGTTTCGTTTTTGTCATGCTTGCTGCTGTCATGTCTGGT TTTCGTTGGTGTATGACCCAAGTTCTTTTGCAGAAAGAAACGTATGGCCTGAAAAATCCATTCACATTTATGAGTTGCGT GGCACCAGTGATGGCTATAGTGACTGGTCTTCTTTCTCTCCTTCTGGATCCATGGAGTGAATTTAGAGAGAACAGATACT TCGATAATGGAGAGCATTTTGCTCGAACTTGTTTCTTGATGCTTTTTGGTGGAGCACTAGCTTTTTTCATGGTTTTAACA GAGTATGTTCTTGTTTCGGTGACCAGTGCTGTAACCGTCACAATAGCGGGCGTCGTTAAAGAGGCTGTCACCATAGTGGT TGCAGTGTTTTACTTCCATGACGAATTTACGTGGCTGAAAGGTTTTGGTCTGATGATTATCATGGTTGGTGTCAGCTTGT TCAACTGGTACAAATATGATAAACTACAAAAGGGGCACAGAACAGAAGATGAGAAGCAGCTTCAATCTCCAAGTCAAACA GGAAAATATGTGATTCTTGATGAGAGGGACGATCAAGAAGATGGTCCTTGA |
Bn_scaffoldA10:2850505-2850517:+ does not have available information here.