| Microexon ID | Bn_scaffoldA08:27717553-27717565:- |
| Species | Brassica Napus | Coordinates | scaffoldA08:27717553..27717565 |
| Microexon Cluster ID | MEP31 |
| Size | 13 |
| Phase | 0 |
| Pfam Domain Motif | TPT |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,13,47 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | GCTGTYATGTCTGGKTTYCGYTGGTSYATGACTCARATTCTTYTGCAGAAAGAARMHTAYGGTYTRAARAATCCAYTTACCTTGATGAGYTATGTKACYCCAGTGATG |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | AAAGAAACCTACG |
| Microexon Amino Acid seq | KETYG |
| Microexon-tag DNA Seq | GCTGTCATGTCTGGTTTCCGCTGGTGTATGACCCAAGTTCTTTTGCAGAAAGAAACCTACGGCCTGAAAAATCCCTTCACATTTATGAGTTACGTGGCACCAGTGATG |
| Microexon-tag Amino Acid Seq | AVMSGFRWCMTQVLLQKETYGLKNPFTFMSYVAPVM |
| Microexon-tag spanning region | 27717413-27717718 |
| Microexon-tag prediction score | 0.9654 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | BnaA08T0307000ZSx |
| Reference Transcript ID | BnaA08T0307000ZS |
| Gene ID | BnaA08G0307000ZS |
| Gene Name | NA |
| Transcript ID | BnaA08T0307000ZS |
| Protein ID | |
| Gene ID | BnaA08G0307000ZS |
| Gene Name | |
| Pfam domain motif | TPT |
| Motif E-value | 1.20E-29 |
| Motif start | 75 |
| Motif end | 374 |
| Protein seq | >BnaA08T0307000ZS MEQRVQLRGSSTVEAMSSLGDVDREQVSEPFDIENESRKDTNHPSSFDVGYSSGDNLETLPKASTEAISPADILKTLFFI LVWYTFSTFLTLYNKTLLGDDLGKFPAPLLMNTIHFSIQAVLSKMVTWYWSGRFQPDNAISWRDYFVRVVPTALATALDI NLSNESLVFISVTFATMCKSAAPIFLLLFAFAFRLESPSLKLFGIISVISAGVLLSVAKETEFEFWGFVFVMLAAVMSGF RWCMTQVLLQKETYGLKNPFTFMSYVAPVMAIVTGLLSLLLDPWSEFRDNIYFDSGAHFTRTCFLMLFGGALAFCMVLTE YILVSVTSAVTVTIAGVVKEAVTIVVAVFYFHDEFTWLKGFGLMIIMVGVSLFNWYK* |
| CDS seq | >BnaA08T0307000ZS ATGGAGCAAAGAGTACAGCTACGCGGTAGTAGCACTGTAGAAGCTATGTCCAGTCTAGGAGATGTAGACAGAGAACAGGT TTCAGAGCCGTTTGATATTGAGAATGAATCCAGGAAGGATACAAACCACCCCAGCAGTTTTGATGTTGGTTACAGTTCCG GTGATAACCTGGAAACGTTGCCTAAAGCTTCAACAGAGGCTATCTCTCCCGCTGACATTCTAAAAACACTCTTCTTTATA CTTGTATGGTACACTTTCAGCACTTTTTTGACTCTGTACAACAAAACTCTCTTAGGAGATGATTTGGGGAAATTTCCTGC TCCCTTGTTAATGAATACCATTCACTTTTCTATTCAAGCGGTTTTATCAAAGATGGTAACTTGGTATTGGTCCGGAAGAT TTCAACCTGATAATGCCATATCATGGAGAGACTATTTCGTTAGAGTTGTACCAACAGCACTTGCAACTGCTTTGGATATA AATCTAAGTAATGAGTCACTGGTCTTCATATCGGTTACGTTTGCAACAATGTGCAAATCTGCAGCCCCAATATTTCTTCT TCTGTTTGCTTTTGCCTTCAGGTTGGAGTCTCCAAGCCTGAAGCTTTTTGGTATTATTTCAGTTATCTCAGCAGGAGTGC TGTTATCAGTTGCAAAGGAGACAGAATTTGAGTTTTGGGGTTTCGTTTTTGTCATGCTCGCTGCTGTCATGTCTGGTTTC CGCTGGTGTATGACCCAAGTTCTTTTGCAGAAAGAAACCTACGGCCTGAAAAATCCCTTCACATTTATGAGTTACGTGGC ACCAGTGATGGCAATAGTGACTGGTCTTCTCTCTCTCCTTCTGGATCCATGGAGTGAATTTAGAGACAACATATACTTTG ATAGTGGAGCGCATTTTACTCGAACTTGTTTCTTGATGCTTTTTGGTGGAGCCTTGGCTTTTTGCATGGTTTTAACAGAG TATATTCTTGTTTCGGTGACCAGTGCTGTAACCGTCACAATAGCGGGGGTCGTTAAAGAGGCTGTCACCATAGTGGTTGC TGTGTTTTATTTCCACGACGAATTTACGTGGCTGAAAGGCTTTGGTCTGATGATTATCATGGTTGGTGTCAGTTTGTTCA ACTGGTACAAGTAA |
Bn_scaffoldA08:27717553-27717565:- does not have available information here.