
Microexon ID | At_1:1972267-1972279:+ |
Species | Arabidopsis thaliana | Coordinates | 1:1972267..1972279 |
Microexon Cluster ID | MEP31 |
Size | 13 |
Phase | 0 |
Pfam Domain Motif | TPT |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,13,47 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GCTGTYATGTCTGGKTTYCGYTGGTSYATGACTCARATTCTTYTGCAGAAAGAARMHTAYGGTYTRAARAATCCAYTTACCTTGATGAGYTATGTKACYCCAGTGATG |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | AAAGAAACATTTG |
Microexon Amino Acid seq | KETFG |
Microexon-tag DNA Seq | GCTGTCATGTCTGGTTTCCGCTGGTGTATGACGCAAGTTCTTTTGCAGAAAGAAACATTTGGACTGAAAAATCCATTCATATTCATGAGCTGTGTGGCACCAGTGATG |
Microexon-tag Amino Acid Seq | AVMSGFRWCMTQVLLQKETFGLKNPFIFMSCVAPVM |
Microexon-tag spanning region | 1972084-1972434 |
Microexon-tag prediction score | 0.9516 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | AT1G06470.1x |
Reference Transcript ID | AT1G06470.1 |
Gene ID | AT1G06470 |
Gene Name | NA |
Transcript ID | AT1G06470.1 |
Protein ID | AT1G06470.1 |
Gene ID | AT1G06470 |
Gene Name | NA |
Pfam domain motif | TPT |
Motif E-value | 1.1e-30 |
Motif start | 74 |
Motif end | 373 |
Protein seq | >AT1G06470.1 MEQRVQLRVGTMETISNEGDVDREQVLETFGIENETGKETNGSRSFDVGYSSGDTLETLPKASKVDISPADVLKTLFFIL VWYTFSTFLTLYNKTLLGDDLGKFPAPLLMNTIHFSIQAVLSKMITWYWSGRFQPDVTISWRDYFVRVVPTALGTAMDIN LSNESLVFISVTFATMCKSAAPIFLLLFAFAFRLESPSLKLFGIISVISAGVLLTVAKETEFEFWGFVFVMLAAVMSGFR WCMTQVLLQKETFGLKNPFIFMSCVAPVMAIATGLLSLLLDPWSEFRDNKYFDSGAHFARTCFLMLFGGALAFCMVLTEY VLVSVTSAVTVTIAGVVKEAVTIVVAVFYFHDEFTWLKGVGLMIIMVGVSLFNWYKYDKLQKGHKTEEEKQLQAPSQTGK YVILDEMDDQENSP* |
CDS seq | >AT1G06470.1 ATGGAGCAAAGAGTGCAGCTCCGTGTTGGTACAATGGAAACCATATCCAATGAGGGAGATGTAGATAGAGAACAGGTTTT AGAGACTTTTGGTATTGAAAATGAGACCGGGAAGGAGACAAACGGCTCCAGAAGTTTTGATGTTGGTTACAGTTCCGGTG ATACCCTTGAAACATTGCCTAAAGCGTCAAAAGTAGATATCTCTCCTGCTGACGTGCTTAAAACACTCTTCTTTATACTT GTATGGTACACTTTCAGCACATTTCTGACTCTGTACAACAAAACTCTCTTAGGAGATGATTTAGGGAAATTTCCTGCTCC CTTATTAATGAATACCATTCACTTTTCTATTCAAGCTGTTTTATCAAAGATGATAACATGGTATTGGTCGGGGAGATTTC AGCCTGATGTTACCATATCATGGAGAGACTATTTCGTTAGAGTTGTACCAACAGCGCTTGGAACTGCTATGGATATAAAC CTAAGTAACGAGTCACTTGTCTTCATATCGGTTACATTTGCAACAATGTGCAAATCTGCAGCCCCAATATTTCTTCTTCT GTTTGCTTTTGCCTTCAGGCTGGAGTCTCCAAGCCTGAAACTTTTTGGCATTATTTCAGTGATCTCAGCAGGAGTGTTGT TAACAGTTGCAAAGGAGACAGAATTTGAGTTTTGGGGTTTCGTTTTTGTCATGCTTGCTGCTGTCATGTCTGGTTTCCGC TGGTGTATGACGCAAGTTCTTTTGCAGAAAGAAACATTTGGACTGAAAAATCCATTCATATTCATGAGCTGTGTGGCACC AGTGATGGCTATAGCGACTGGTCTTCTTTCTCTCCTTCTGGATCCATGGAGTGAATTTAGAGACAACAAATACTTTGATA GTGGAGCACATTTTGCTCGAACTTGTTTTTTGATGCTTTTTGGCGGAGCACTGGCTTTTTGTATGGTTTTGACAGAGTAT GTCCTTGTTTCCGTAACTAGTGCTGTAACCGTCACAATAGCGGGAGTTGTCAAAGAGGCTGTCACCATAGTGGTTGCAGT GTTTTACTTCCATGACGAATTTACGTGGCTGAAAGGTGTGGGTCTGATGATCATTATGGTTGGTGTCAGTTTGTTCAACT GGTACAAATATGATAAACTACAAAAGGGGCACAAAACAGAGGAAGAGAAGCAGTTACAAGCTCCAAGTCAGACTGGAAAA TATGTGATTCTTGATGAGATGGATGATCAAGAAAATAGTCCCTAA |
Microexon DNA seq | AAAGAAACATTTG |
Microexon Amino Acid seq | KETFG |
Microexon-tag DNA Seq | GCTGTCATGTCTGGTTTCCGCTGGTGTATGACGCAAGTTCTTTTGCAGAAAGAAACATTTGGACTGAAAAATCCATTCATATTCATGAGCTGTGTGGCACCAGTGATG |
Microexon-tag Amino Acid seq | AVMSGFRWCMTQVLLQKETFGLKNPFIFMSCVAPVM |
Transcript ID | AT1G06470.2 |
Gene ID | At.633 |
Gene Name | NA |
Pfam domain motif | TPT |
Motif E-value | 1.1e-30 |
Motif start | 74 |
Motif end | 373 |
Protein seq | >AT1G06470.2 MEQRVQLRVGTMETISNEGDVDREQVLETFGIENETGKETNGSRSFDVGYSSGDTLETLPKASKVDISPADVLKTLFFIL VWYTFSTFLTLYNKTLLGDDLGKFPAPLLMNTIHFSIQAVLSKMITWYWSGRFQPDVTISWRDYFVRVVPTALGTAMDIN LSNESLVFISVTFATMCKSAAPIFLLLFAFAFRLESPSLKLFGIISVISAGVLLTVAKETEFEFWGFVFVMLAAVMSGFR WCMTQVLLQKETFGLKNPFIFMSCVAPVMAIATGLLSLLLDPWSEFRDNKYFDSGAHFARTCFLMLFGGALAFCMVLTEY VLVSVTSAVTVTIAGVVKEAVTIVVAVFYFHDEFTWLKGVGLMIIMVGVSLFNWYKYDKLQKGHKTEEEKQLQAPSQTGK YVILDEMDDQENSP* |
CDS seq | >AT1G06470.2 ATGGAGCAAAGAGTGCAGCTCCGTGTTGGTACAATGGAAACCATATCCAATGAGGGAGATGTAGATAGAGAACAGGTTTT AGAGACTTTTGGTATTGAAAATGAGACCGGGAAGGAGACAAACGGCTCCAGAAGTTTTGATGTTGGTTACAGTTCCGGTG ATACCCTTGAAACATTGCCTAAAGCGTCAAAAGTAGATATCTCTCCTGCTGACGTGCTTAAAACACTCTTCTTTATACTT GTATGGTACACTTTCAGCACATTTCTGACTCTGTACAACAAAACTCTCTTAGGAGATGATTTAGGGAAATTTCCTGCTCC CTTATTAATGAATACCATTCACTTTTCTATTCAAGCTGTTTTATCAAAGATGATAACATGGTATTGGTCGGGGAGATTTC AGCCTGATGTTACCATATCATGGAGAGACTATTTCGTTAGAGTTGTACCAACAGCGCTTGGAACTGCTATGGATATAAAC CTAAGTAACGAGTCACTTGTCTTCATATCGGTTACATTTGCAACAATGTGCAAATCTGCAGCCCCAATATTTCTTCTTCT GTTTGCTTTTGCCTTCAGGCTGGAGTCTCCAAGCCTGAAACTTTTTGGCATTATTTCAGTGATCTCAGCAGGAGTGTTGT TAACAGTTGCAAAGGAGACAGAATTTGAGTTTTGGGGTTTCGTTTTTGTCATGCTTGCTGCTGTCATGTCTGGTTTCCGC TGGTGTATGACGCAAGTTCTTTTGCAGAAAGAAACATTTGGACTGAAAAATCCATTCATATTCATGAGCTGTGTGGCACC AGTGATGGCTATAGCGACTGGTCTTCTTTCTCTCCTTCTGGATCCATGGAGTGAATTTAGAGACAACAAATACTTTGATA GTGGAGCACATTTTGCTCGAACTTGTTTTTTGATGCTTTTTGGCGGAGCACTGGCTTTTTGTATGGTTTTGACAGAGTAT GTCCTTGTTTCCGTAACTAGTGCTGTAACCGTCACAATAGCGGGAGTTGTCAAAGAGGCTGTCACCATAGTGGTTGCAGT GTTTTACTTCCATGACGAATTTACGTGGCTGAAAGGTGTGGGTCTGATGATCATTATGGTTGGTGTCAGTTTGTTCAACT GGTACAAATATGATAAACTACAAAAGGGGCACAAAACAGAGGAAGAGAAGCAGTTACAAGCTCCAAGTCAGACTGGAAAA TATGTGATTCTTGATGAGATGGATGATCAAGAAAATAGTCCCTAA |