
Microexon ID | Vv_10:1114709-1114720:+ |
Species | Vistis vinifera | Coordinates | 10:1114709..1114720 |
Microexon Cluster ID | MEP30 |
Size | 12 |
Phase | 1 |
Pfam Domain Motif | SPARK |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,12,47 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | RATGTYTAYRRYCTTTGTCATATAASCCTSAARGAYTTYTCYCTYCAAGTTGGAWMWCAAGARTCTGGWTGYCTWYTDCCAAGYTTGCCTTCAGATGCAAYATTTGAY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Vv_10:1114709-1114720:+ does not have available information here.
Transcript ID | VIT_10s0116g01850.t01 |
Protein ID | VIT_10s0116g01850.t01 |
Gene ID | VIT_10s0116g01850 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >VIT_10s0116g01850.t01 MRDGVCSNFSVLSVFLLVLFLCLHESHCSLPSYMKGSVLMEKSSDAFLPEISPSGAPQPFLPLLAPSPLTPFTTNSTIPK LSGLCSLNFSAGESMISMTSIDCWAVFASVLANVICCPQLKATLHILIGQSSKDTNLLALNETLAKHCLSDVEQILVSQG ASDKLHQICSIHPSSLTEGSCPVKDVNEFESIVDSTKLLSACEQIDLVKECCNQICQNAILEAARKIALKAYELLSVDPP HALPEHSTRVDDCKNIVLRWLASKLSPGRAKGVLRGLSNCNVNKVCPLVFPDTRHVAKGCGNGTSNQTACCSSMERYVSH LQKQSLITNLQALDCAASLGMKLQKANITRNIYNLCRITLKDFSLQAVGQESGCLLPSLPSDATLDKSSGISFICDLNDN IPAPWPSSSQLPASSCNKTVKIPALPAVASAQSDAPESVIQEGLKDGIKGYIISSALCTCVGSGRDAGGRVLDSKKCNQW NP* |
CDS seq | >VIT_10s0116g01850.t01 ATGAGAGACGGGGTGTGTAGCAATTTCAGTGTGCTCAGTGTGTTTCTGTTGGTTCTGTTTCTCTGTCTTCATGAATCCCA TTGCAGCCTGCCAAGTTATATGAAAGGTTCTGTATTAATGGAAAAAAGCTCAGATGCCTTTTTACCTGAGATCTCCCCAA GTGGTGCTCCACAGCCATTTCTTCCTCTTCTTGCTCCTTCACCGCTGACACCATTCACAACAAATAGCACTATCCCAAAA TTATCAGGACTTTGTAGTTTAAACTTCTCTGCTGGTGAAAGTATGATCAGCATGACATCAATTGATTGCTGGGCTGTATT TGCTTCAGTTCTGGCTAATGTAATATGCTGTCCGCAGTTGAAAGCTACACTACACATTCTCATTGGCCAATCCAGCAAAG ACACCAATCTTCTCGCTTTGAATGAGACACTGGCAAAGCACTGCCTCTCGGATGTTGAGCAAATTCTAGTGAGTCAGGGT GCCAGTGATAAACTTCATCAGATATGCTCAATTCATCCATCAAGCCTCACTGAAGGCTCTTGCCCAGTCAAAGATGTTAA TGAGTTCGAGAGCATTGTGGATTCTACTAAGCTGCTTTCTGCATGTGAACAAATTGATCTTGTGAAAGAATGCTGTAATC AAATATGTCAGAATGCCATATTAGAAGCAGCTAGAAAAATCGCACTGAAAGCTTATGAGCTTTTGAGTGTGGATCCACCC CATGCACTGCCTGAACACTCGACTAGAGTTGATGACTGTAAAAATATTGTACTGCGATGGTTGGCAAGTAAGCTCAGTCC TGGCCGAGCCAAGGGTGTTCTTAGAGGACTATCTAATTGTAATGTTAATAAAGTTTGTCCTCTGGTTTTTCCTGACACAA GACATGTTGCAAAGGGCTGTGGAAATGGGACAAGCAACCAGACGGCATGCTGTAGTTCTATGGAGAGGTATGTGTCTCAT TTGCAAAAGCAGAGTTTGATAACCAACTTGCAAGCTTTGGACTGTGCTGCATCACTTGGAATGAAGTTACAGAAGGCAAA TATTACGAGAAATATTTATAACCTCTGTCGAATTACCCTCAAGGATTTCTCTCTCCAAGCCGTTGGACAAGAGTCTGGAT GCCTTTTGCCAAGCTTGCCTTCAGATGCAACATTGGACAAGTCTTCAGGGATAAGTTTCATTTGTGATCTGAATGACAAC ATTCCAGCTCCTTGGCCTTCTTCATCTCAATTACCAGCTTCATCATGCAATAAAACTGTCAAAATTCCTGCACTTCCTGC AGTCGCATCTGCTCAAAGTGATGCTCCTGAATCAGTTATCCAGGAGGGGCTAAAGGATGGTATTAAGGGATACATCATAA GCAGTGCCTTGTGCACCTGTGTTGGCAGTGGAAGAGATGCCGGTGGGAGAGTTCTTGATAGCAAAAAATGCAATCAGTGG AACCCTTGA |
Microexon DNA seq | CCGTTGGACAAG |
Microexon Amino Acid seq | AVGQE |
Microexon-tag DNA Seq | AATATTTATAACCTCTGTCGAATTACCCTCAAGGATTTCTCTCTCCAAGCCGTTGGACAAGAGTCTGGATGCCTTTTGCCAAGCTTGCCTTCAGATGCAACATTGGAC |
Microexon-tag Amino Acid seq | NIYNLCRITLKDFSLQAVGQESGCLLPSLPSDATLD |
Transcript ID | Vv.1951.1 |
Gene ID | Vv.1951 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Vv.1951.1 MRDGVCSNFSVLSVFLLVLFLCLHESHCSLPSYMKGSVLMEKSSDAFLPEISPSGAPQPFLPLLAPSPLTPFTTNSTIPK LSGLCSLNFSAGESMISMTSIDCWAVFASVLANVICCPQLKATLHILIGQSSKDTNLLALNETLAKHCLSDVEQILVSQG ASDKLHQICSIHPSSLTEGSCPVKDVNEFESIVDSTKLLSACEQIDLVKECCNQICQNAILEAARKIALKAYELLSVDPP HALPEHSTRVDDCKNIVLRWLASKLSPGRAKGVLRGLSNCNVNKVCPLVFPDTRHVAKGCGNGTSNQTACCSSMERYVSH LQKQSLITNLQALDCAASLGMKLQKANITRNIYNLCRITLKDFSLQAVGQESGCLLPSLPSDATLDKSSGISFICDLNDN IPAPWPSSSQLPASSCNKTVKIPALPAVASAQSGLYSEDIMPRLLFTSSMVLTMLL* |
CDS seq | >Vv.1951.1 ATGAGAGACGGGGTGTGTAGCAATTTCAGTGTGCTCAGTGTGTTTCTGTTGGTTCTGTTTCTCTGTCTTCATGAATCCCA TTGCAGCCTGCCAAGTTATATGAAAGGTTCTGTATTAATGGAAAAAAGCTCAGATGCCTTTTTACCTGAGATCTCCCCAA GTGGTGCTCCACAGCCATTTCTTCCTCTTCTTGCTCCTTCACCGCTGACACCATTCACAACAAATAGCACTATCCCAAAA TTATCAGGACTTTGTAGTTTAAACTTCTCTGCTGGTGAAAGTATGATCAGCATGACATCAATTGATTGCTGGGCTGTATT TGCTTCAGTTCTGGCTAATGTAATATGCTGTCCGCAGTTGAAAGCTACACTACACATTCTCATTGGCCAATCCAGCAAAG ACACCAATCTTCTCGCTTTGAATGAGACACTGGCAAAGCACTGCCTCTCGGATGTTGAGCAAATTCTAGTGAGTCAGGGT GCCAGTGATAAACTTCATCAGATATGCTCAATTCATCCATCAAGCCTCACTGAAGGCTCTTGCCCAGTCAAAGATGTTAA TGAGTTCGAGAGCATTGTGGATTCTACTAAGCTGCTTTCTGCATGTGAACAAATTGATCTTGTGAAAGAATGCTGTAATC AAATATGTCAGAATGCCATATTAGAAGCAGCTAGAAAAATCGCACTGAAAGCTTATGAGCTTTTGAGTGTGGATCCACCC CATGCACTGCCTGAACACTCGACTAGAGTTGATGACTGTAAAAATATTGTACTGCGATGGTTGGCAAGTAAGCTCAGTCC TGGCCGAGCCAAGGGTGTTCTTAGAGGACTATCTAATTGTAATGTTAATAAAGTTTGTCCTCTGGTTTTTCCTGACACAA GACATGTTGCAAAGGGCTGTGGAAATGGGACAAGCAACCAGACGGCATGCTGTAGTTCTATGGAGAGGTATGTGTCTCAT TTGCAAAAGCAGAGTTTGATAACCAACTTGCAAGCTTTGGACTGTGCTGCATCACTTGGAATGAAGTTACAGAAGGCAAA TATTACGAGAAATATTTATAACCTCTGTCGAATTACCCTCAAGGATTTCTCTCTCCAAGCCGTTGGACAAGAGTCTGGAT GCCTTTTGCCAAGCTTGCCTTCAGATGCAACATTGGACAAGTCTTCAGGGATAAGTTTCATTTGTGATCTGAATGACAAC ATTCCAGCTCCTTGGCCTTCTTCATCTCAATTACCAGCTTCATCATGCAATAAAACTGTCAAAATTCCTGCACTTCCTGC AGTCGCATCTGCTCAAAGTGGTCTTTACAGTGAAGATATAATGCCACGACTGCTCTTTACCTCCTCTATGGTTCTCACGA TGCTCCTGTAA |