Microexon ID Vv_10:1114709-1114720:+
Species Vistis vinifera
Coordinates 10:1114709..1114720
Microexon Cluster ID MEP30
Size 12
Phase 1
Pfam Domain Motif SPARK
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,12,47
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq RATGTYTAYRRYCTTTGTCATATAASCCTSAARGAYTTYTCYCTYCAAGTTGGAWMWCAAGARTCTGGWTGYCTWYTDCCAAGYTTGCCTTCAGATGCAAYATTTGAY
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Vv_10:1114709-1114720:+ does not have available information here.
Transcript ID VIT_10s0116g01850.t01
Protein ID VIT_10s0116g01850.t01
Gene ID VIT_10s0116g01850
Gene Name NA
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >VIT_10s0116g01850.t01
MRDGVCSNFSVLSVFLLVLFLCLHESHCSLPSYMKGSVLMEKSSDAFLPEISPSGAPQPFLPLLAPSPLTPFTTNSTIPK
LSGLCSLNFSAGESMISMTSIDCWAVFASVLANVICCPQLKATLHILIGQSSKDTNLLALNETLAKHCLSDVEQILVSQG
ASDKLHQICSIHPSSLTEGSCPVKDVNEFESIVDSTKLLSACEQIDLVKECCNQICQNAILEAARKIALKAYELLSVDPP
HALPEHSTRVDDCKNIVLRWLASKLSPGRAKGVLRGLSNCNVNKVCPLVFPDTRHVAKGCGNGTSNQTACCSSMERYVSH
LQKQSLITNLQALDCAASLGMKLQKANITRNIYNLCRITLKDFSLQAVGQESGCLLPSLPSDATLDKSSGISFICDLNDN
IPAPWPSSSQLPASSCNKTVKIPALPAVASAQSDAPESVIQEGLKDGIKGYIISSALCTCVGSGRDAGGRVLDSKKCNQW
NP*
CDS seq >VIT_10s0116g01850.t01
ATGAGAGACGGGGTGTGTAGCAATTTCAGTGTGCTCAGTGTGTTTCTGTTGGTTCTGTTTCTCTGTCTTCATGAATCCCA
TTGCAGCCTGCCAAGTTATATGAAAGGTTCTGTATTAATGGAAAAAAGCTCAGATGCCTTTTTACCTGAGATCTCCCCAA
GTGGTGCTCCACAGCCATTTCTTCCTCTTCTTGCTCCTTCACCGCTGACACCATTCACAACAAATAGCACTATCCCAAAA
TTATCAGGACTTTGTAGTTTAAACTTCTCTGCTGGTGAAAGTATGATCAGCATGACATCAATTGATTGCTGGGCTGTATT
TGCTTCAGTTCTGGCTAATGTAATATGCTGTCCGCAGTTGAAAGCTACACTACACATTCTCATTGGCCAATCCAGCAAAG
ACACCAATCTTCTCGCTTTGAATGAGACACTGGCAAAGCACTGCCTCTCGGATGTTGAGCAAATTCTAGTGAGTCAGGGT
GCCAGTGATAAACTTCATCAGATATGCTCAATTCATCCATCAAGCCTCACTGAAGGCTCTTGCCCAGTCAAAGATGTTAA
TGAGTTCGAGAGCATTGTGGATTCTACTAAGCTGCTTTCTGCATGTGAACAAATTGATCTTGTGAAAGAATGCTGTAATC
AAATATGTCAGAATGCCATATTAGAAGCAGCTAGAAAAATCGCACTGAAAGCTTATGAGCTTTTGAGTGTGGATCCACCC
CATGCACTGCCTGAACACTCGACTAGAGTTGATGACTGTAAAAATATTGTACTGCGATGGTTGGCAAGTAAGCTCAGTCC
TGGCCGAGCCAAGGGTGTTCTTAGAGGACTATCTAATTGTAATGTTAATAAAGTTTGTCCTCTGGTTTTTCCTGACACAA
GACATGTTGCAAAGGGCTGTGGAAATGGGACAAGCAACCAGACGGCATGCTGTAGTTCTATGGAGAGGTATGTGTCTCAT
TTGCAAAAGCAGAGTTTGATAACCAACTTGCAAGCTTTGGACTGTGCTGCATCACTTGGAATGAAGTTACAGAAGGCAAA
TATTACGAGAAATATTTATAACCTCTGTCGAATTACCCTCAAGGATTTCTCTCTCCAAGCCGTTGGACAAGAGTCTGGAT
GCCTTTTGCCAAGCTTGCCTTCAGATGCAACATTGGACAAGTCTTCAGGGATAAGTTTCATTTGTGATCTGAATGACAAC
ATTCCAGCTCCTTGGCCTTCTTCATCTCAATTACCAGCTTCATCATGCAATAAAACTGTCAAAATTCCTGCACTTCCTGC
AGTCGCATCTGCTCAAAGTGATGCTCCTGAATCAGTTATCCAGGAGGGGCTAAAGGATGGTATTAAGGGATACATCATAA
GCAGTGCCTTGTGCACCTGTGTTGGCAGTGGAAGAGATGCCGGTGGGAGAGTTCTTGATAGCAAAAAATGCAATCAGTGG
AACCCTTGA
Microexon DNA seq CCGTTGGACAAG
Microexon Amino Acid seq AVGQE
Microexon-tag DNA Seq AATATTTATAACCTCTGTCGAATTACCCTCAAGGATTTCTCTCTCCAAGCCGTTGGACAAGAGTCTGGATGCCTTTTGCCAAGCTTGCCTTCAGATGCAACATTGGAC
Microexon-tag Amino Acid seq NIYNLCRITLKDFSLQAVGQESGCLLPSLPSDATLD
Transcript ID Vv.1951.1
Gene ID Vv.1951
Gene Name NA
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >Vv.1951.1
MRDGVCSNFSVLSVFLLVLFLCLHESHCSLPSYMKGSVLMEKSSDAFLPEISPSGAPQPFLPLLAPSPLTPFTTNSTIPK
LSGLCSLNFSAGESMISMTSIDCWAVFASVLANVICCPQLKATLHILIGQSSKDTNLLALNETLAKHCLSDVEQILVSQG
ASDKLHQICSIHPSSLTEGSCPVKDVNEFESIVDSTKLLSACEQIDLVKECCNQICQNAILEAARKIALKAYELLSVDPP
HALPEHSTRVDDCKNIVLRWLASKLSPGRAKGVLRGLSNCNVNKVCPLVFPDTRHVAKGCGNGTSNQTACCSSMERYVSH
LQKQSLITNLQALDCAASLGMKLQKANITRNIYNLCRITLKDFSLQAVGQESGCLLPSLPSDATLDKSSGISFICDLNDN
IPAPWPSSSQLPASSCNKTVKIPALPAVASAQSGLYSEDIMPRLLFTSSMVLTMLL*
CDS seq >Vv.1951.1
ATGAGAGACGGGGTGTGTAGCAATTTCAGTGTGCTCAGTGTGTTTCTGTTGGTTCTGTTTCTCTGTCTTCATGAATCCCA
TTGCAGCCTGCCAAGTTATATGAAAGGTTCTGTATTAATGGAAAAAAGCTCAGATGCCTTTTTACCTGAGATCTCCCCAA
GTGGTGCTCCACAGCCATTTCTTCCTCTTCTTGCTCCTTCACCGCTGACACCATTCACAACAAATAGCACTATCCCAAAA
TTATCAGGACTTTGTAGTTTAAACTTCTCTGCTGGTGAAAGTATGATCAGCATGACATCAATTGATTGCTGGGCTGTATT
TGCTTCAGTTCTGGCTAATGTAATATGCTGTCCGCAGTTGAAAGCTACACTACACATTCTCATTGGCCAATCCAGCAAAG
ACACCAATCTTCTCGCTTTGAATGAGACACTGGCAAAGCACTGCCTCTCGGATGTTGAGCAAATTCTAGTGAGTCAGGGT
GCCAGTGATAAACTTCATCAGATATGCTCAATTCATCCATCAAGCCTCACTGAAGGCTCTTGCCCAGTCAAAGATGTTAA
TGAGTTCGAGAGCATTGTGGATTCTACTAAGCTGCTTTCTGCATGTGAACAAATTGATCTTGTGAAAGAATGCTGTAATC
AAATATGTCAGAATGCCATATTAGAAGCAGCTAGAAAAATCGCACTGAAAGCTTATGAGCTTTTGAGTGTGGATCCACCC
CATGCACTGCCTGAACACTCGACTAGAGTTGATGACTGTAAAAATATTGTACTGCGATGGTTGGCAAGTAAGCTCAGTCC
TGGCCGAGCCAAGGGTGTTCTTAGAGGACTATCTAATTGTAATGTTAATAAAGTTTGTCCTCTGGTTTTTCCTGACACAA
GACATGTTGCAAAGGGCTGTGGAAATGGGACAAGCAACCAGACGGCATGCTGTAGTTCTATGGAGAGGTATGTGTCTCAT
TTGCAAAAGCAGAGTTTGATAACCAACTTGCAAGCTTTGGACTGTGCTGCATCACTTGGAATGAAGTTACAGAAGGCAAA
TATTACGAGAAATATTTATAACCTCTGTCGAATTACCCTCAAGGATTTCTCTCTCCAAGCCGTTGGACAAGAGTCTGGAT
GCCTTTTGCCAAGCTTGCCTTCAGATGCAACATTGGACAAGTCTTCAGGGATAAGTTTCATTTGTGATCTGAATGACAAC
ATTCCAGCTCCTTGGCCTTCTTCATCTCAATTACCAGCTTCATCATGCAATAAAACTGTCAAAATTCCTGCACTTCCTGC
AGTCGCATCTGCTCAAAGTGGTCTTTACAGTGAAGATATAATGCCACGACTGCTCTTTACCTCCTCTATGGTTCTCACGA
TGCTCCTGTAA