Microexon ID Ta_2A:393120549-393120560:-
Species Triticum   Aestivum
Coordinates 2A:393120549..393120560
Microexon Cluster ID MEP30
Size 12
Phase 1
Pfam Domain Motif SPARK
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,12,47
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq RATGTYTAYRRYCTTTGTCATATAASCCTSAARGAYTTYTCYCTYCAAGTTGGAWMWCAAGARTCTGGWTGYCTWYTDCCAAGYTTGCCTTCAGATGCAAYATTTGAY
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TTGGATCTCAAG
Microexon Amino Acid seq VGSQE
Microexon-tag DNA Seq AATGTTTATAGCTCATGCCAAGTAACATTGAAGGATTTCTCACTTCAAGTTGGATCTCAAGAATCTGGATGCCTTCTTCCAAGTATGCCCTCTGATGCATCATTTGAC
Microexon-tag Amino Acid Seq NVYSSCQVTLKDFSLQVGSQESGCLLPSMPSDASFD
Microexon-tag spanning region393113865-393120759
Microexon-tag prediction score0.9685
Overlapped with the annotated transcript (%) 75.93
New Transcript ID TraesCS2A02G256400.1x
Reference Transcript ID TraesCS2A02G256400.1
Gene ID TraesCS2A02G256400
Gene Name NA
Transcript ID TraesCS2A02G256400.1
Protein ID
Gene ID TraesCS2A02G256400
Gene Name
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >TraesCS2A02G256400.1
MGPAGRLSVAAALLSCLCLHGLLGNSGQAFAQGPPVLHRIDHAEEDDDSGGLMPELSPTGSPQPFVPFLAPAPLAPFYNN
STPKLSGKCSLNFTAINGLMTTTAVDCFASFAPFLANVICCPQLQATLTILIGQSSKQTGSLALDPTLANYCLSDVQQLL
MSQGASDDLHSICSVHLSNATEGSCPVSTVDAFESVVDSSKLLEACRKVDPVNECCSQTCQSAISDAARKISSKDAALTS
DTASPKVNSCRNVVLRWLSSRLEPSSATKMLRQISNCNVNGVCPLSFPDTSKVAKECGGTVKNITVCCKAMDSYVSHLQK
QSFITNLQALNCASVLGAKLQEMKVSTNVYSSCQVTLKDFSLQVGSQESGCLLPTAPWSPSLQASASTCNKSAAPGPTIP
ERPAATSAQNGVNHNRLELSLAVCFGALVATILLQV*
CDS seq >TraesCS2A02G256400.1
ATGGGACCCGCAGGCCGGCTGTCCGTGGCGGCCGCTCTCCTCTCATGCCTATGTTTACATGGGCTGTTGGGGAATTCCGG
GCAGGCATTTGCTCAGGGCCCGCCGGTGCTCCACCGGATCGACCACGCGGAGGAAGATGACGACAGCGGCGGCCTCATGC
CGGAGCTCTCGCCGACCGGCTCCCCCCAGCCCTTCGTCCCCTTCCTCGCGCCTGCCCCTCTCGCGCCCTTCTACAACAAC
TCTACGCCCAAGTTGTCAGGNAAATGCTCACTGAACTTCACTGCCATCAATGGCCTGATGACCACCACGGCCGTCGACTG
CTTCGCCTCATTCGCTCCGTTCCTCGCCAATGTCATCTGCTGTCCCCAGCTCCAGGCCACTCTCACCATCCTCATAGGGC
AGTCCAGCAAGCAGACGGGGTCCCTTGCTTTGGATCCCACTCTTGCCAACTACTGTCTCTCTGACGTCCAGCAGCTGCTC
ATGAGCCAGGGTGCCAGTGATGATCTCCACAGCATTTGCTCCGTCCACCTCTCCAATGCCACCGAGGGGTCGTGCCCCGT
TAGCACCGTCGACGCGTTTGAGAGCGTCGTCGACTCGTCGAAGCTCCTCGAGGCCTGCCGGAAGGTCGACCCTGTTAACG
AGTGCTGCAGCCAGACATGCCAGAGCGCTATAAGTGATGCTGCCCGCAAAATCTCTTCCAAGGACGCTGCGTTGACAAGC
GACACTGCCAGTCCCAAAGTTAACAGTTGCAGGAACGTTGTACTTAGATGGTTATCCAGCAGGCTTGAGCCATCATCCGC
AACCAAAATGCTCAGGCAGATATCAAACTGTAATGTCAATGGAGTTTGCCCACTAAGCTTCCCAGACACAAGTAAGGTTG
CAAAGGAGTGTGGTGGTACAGTTAAAAACATTACTGTATGCTGCAAGGCGATGGACAGTTACGTATCTCACTTGCAAAAG
CAAAGTTTCATAACAAATTTGCAAGCTTTGAATTGTGCGTCAGTCCTTGGGGCAAAATTGCAAGAGATGAAGGTCAGCAC
AAATGTTTATAGCTCATGCCAAGTAACATTGAAGGATTTCTCACTTCAAGTTGGATCTCAAGAATCTGGATGCCTTCTTC
CAACTGCCCCATGGTCGCCTTCTTTGCAAGCATCGGCTTCAACATGCAATAAATCAGCTGCTCCTGGTCCAACAATCCCA
GAGAGGCCTGCGGCGACATCGGCGCAGAACGGTGTCAACCACAACAGACTGGAGCTTAGCCTAGCCGTCTGCTTTGGCGC
CCTTGTGGCCACTATTTTACTTCAAGTCTAG
Ta_2A:393120549-393120560:- does not have available information here.