
Microexon ID | Ta_2A:393120549-393120560:- |
Species | Triticum Aestivum | Coordinates | 2A:393120549..393120560 |
Microexon Cluster ID | MEP30 |
Size | 12 |
Phase | 1 |
Pfam Domain Motif | SPARK |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,12,47 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | RATGTYTAYRRYCTTTGTCATATAASCCTSAARGAYTTYTCYCTYCAAGTTGGAWMWCAAGARTCTGGWTGYCTWYTDCCAAGYTTGCCTTCAGATGCAAYATTTGAY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTGGATCTCAAG |
Microexon Amino Acid seq | VGSQE |
Microexon-tag DNA Seq | AATGTTTATAGCTCATGCCAAGTAACATTGAAGGATTTCTCACTTCAAGTTGGATCTCAAGAATCTGGATGCCTTCTTCCAAGTATGCCCTCTGATGCATCATTTGAC |
Microexon-tag Amino Acid Seq | NVYSSCQVTLKDFSLQVGSQESGCLLPSMPSDASFD |
Microexon-tag spanning region | 393113865-393120759 |
Microexon-tag prediction score | 0.9685 |
Overlapped with the annotated transcript (%) | 75.93 |
New Transcript ID | TraesCS2A02G256400.1x |
Reference Transcript ID | TraesCS2A02G256400.1 |
Gene ID | TraesCS2A02G256400 |
Gene Name | NA |
Transcript ID | TraesCS2A02G256400.1 |
Protein ID | |
Gene ID | TraesCS2A02G256400 |
Gene Name | |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >TraesCS2A02G256400.1 MGPAGRLSVAAALLSCLCLHGLLGNSGQAFAQGPPVLHRIDHAEEDDDSGGLMPELSPTGSPQPFVPFLAPAPLAPFYNN STPKLSGKCSLNFTAINGLMTTTAVDCFASFAPFLANVICCPQLQATLTILIGQSSKQTGSLALDPTLANYCLSDVQQLL MSQGASDDLHSICSVHLSNATEGSCPVSTVDAFESVVDSSKLLEACRKVDPVNECCSQTCQSAISDAARKISSKDAALTS DTASPKVNSCRNVVLRWLSSRLEPSSATKMLRQISNCNVNGVCPLSFPDTSKVAKECGGTVKNITVCCKAMDSYVSHLQK QSFITNLQALNCASVLGAKLQEMKVSTNVYSSCQVTLKDFSLQVGSQESGCLLPTAPWSPSLQASASTCNKSAAPGPTIP ERPAATSAQNGVNHNRLELSLAVCFGALVATILLQV* |
CDS seq | >TraesCS2A02G256400.1 ATGGGACCCGCAGGCCGGCTGTCCGTGGCGGCCGCTCTCCTCTCATGCCTATGTTTACATGGGCTGTTGGGGAATTCCGG GCAGGCATTTGCTCAGGGCCCGCCGGTGCTCCACCGGATCGACCACGCGGAGGAAGATGACGACAGCGGCGGCCTCATGC CGGAGCTCTCGCCGACCGGCTCCCCCCAGCCCTTCGTCCCCTTCCTCGCGCCTGCCCCTCTCGCGCCCTTCTACAACAAC TCTACGCCCAAGTTGTCAGGNAAATGCTCACTGAACTTCACTGCCATCAATGGCCTGATGACCACCACGGCCGTCGACTG CTTCGCCTCATTCGCTCCGTTCCTCGCCAATGTCATCTGCTGTCCCCAGCTCCAGGCCACTCTCACCATCCTCATAGGGC AGTCCAGCAAGCAGACGGGGTCCCTTGCTTTGGATCCCACTCTTGCCAACTACTGTCTCTCTGACGTCCAGCAGCTGCTC ATGAGCCAGGGTGCCAGTGATGATCTCCACAGCATTTGCTCCGTCCACCTCTCCAATGCCACCGAGGGGTCGTGCCCCGT TAGCACCGTCGACGCGTTTGAGAGCGTCGTCGACTCGTCGAAGCTCCTCGAGGCCTGCCGGAAGGTCGACCCTGTTAACG AGTGCTGCAGCCAGACATGCCAGAGCGCTATAAGTGATGCTGCCCGCAAAATCTCTTCCAAGGACGCTGCGTTGACAAGC GACACTGCCAGTCCCAAAGTTAACAGTTGCAGGAACGTTGTACTTAGATGGTTATCCAGCAGGCTTGAGCCATCATCCGC AACCAAAATGCTCAGGCAGATATCAAACTGTAATGTCAATGGAGTTTGCCCACTAAGCTTCCCAGACACAAGTAAGGTTG CAAAGGAGTGTGGTGGTACAGTTAAAAACATTACTGTATGCTGCAAGGCGATGGACAGTTACGTATCTCACTTGCAAAAG CAAAGTTTCATAACAAATTTGCAAGCTTTGAATTGTGCGTCAGTCCTTGGGGCAAAATTGCAAGAGATGAAGGTCAGCAC AAATGTTTATAGCTCATGCCAAGTAACATTGAAGGATTTCTCACTTCAAGTTGGATCTCAAGAATCTGGATGCCTTCTTC CAACTGCCCCATGGTCGCCTTCTTTGCAAGCATCGGCTTCAACATGCAATAAATCAGCTGCTCCTGGTCCAACAATCCCA GAGAGGCCTGCGGCGACATCGGCGCAGAACGGTGTCAACCACAACAGACTGGAGCTTAGCCTAGCCGTCTGCTTTGGCGC CCTTGTGGCCACTATTTTACTTCAAGTCTAG |
Ta_2A:393120549-393120560:- does not have available information here.