Microexon ID Sb_2:307885-307896:-
Species Sorghum   Bicolor
Coordinates 2:307885..307896
Microexon Cluster ID MEP30
Size 12
Phase 1
Pfam Domain Motif SPARK
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,12,47
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq RATGTYTAYRRYCTTTGTCATATAASCCTSAARGAYTTYTCYCTYCAAGTTGGAWMWCAAGARTCTGGWTGYCTWYTDCCAAGYTTGCCTTCAGATGCAAYATTTGAY
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TTGGATCTCAAG
Microexon Amino Acid seq VGSQE
Microexon-tag DNA Seq AATGTCTATAGCTCTTGTCAAATAACACTAAAAGATTTTTCACTTCAAGTTGGATCTCAAGAATCTGGATGCCTCCTTCCAAGTATGCCCTCTGATGCATCTTTCGAC
Microexon-tag Amino Acid Seq NVYSSCQITLKDFSLQVGSQESGCLLPSMPSDASFD
Microexon-tag spanning region307237-308096
Microexon-tag prediction score0.9684
Overlapped with the annotated transcript (%) 100
New Transcript ID EER97817x
Reference Transcript ID EER97817
Gene ID SORBI_3002G002100
Gene Name NA
Transcript ID EER97817
Protein ID
Gene ID SORBI_3002G002100
Gene Name
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >EER97817
MAPAGRLLAVAALSFLCLQGLWGDSGSALAQSQPPLHRIVRAEANDGGGGGLMPELPPSGFMPMPDLSPSPSGSPRPFVP
FLAPAPLAPFFNNSTPKLSGKCTLNFTAVDKLMTTTAVDCFTSFAPFLANVICCPQLQATLTILIGQSSKQTGSLALDPT
VANYCLSDVQELLLSQGASDNLHSLCSVHLSNVTEGSCPVSTVDSFESVVDSSKLLEACRKIDSVNECCSQTCQNAINEA
AQKISSKDGGLTTYPGSPKVDSCRNVVLRWLSSRLDPQSAKEMLRQISNCNVNGVCPLSFPDTSKVAKECGGTMKNSTAC
CKAMLTYVAHLQKQSFITNLQALNCASFLGAKLQKMNVSTNVYSSCQITLKDFSLQVGSQESGCLLPSMPSDASFDSTSG
ISFTCDLNDNIAAPWPSSMQAPSSSCNKSVNIPERPAATSAQNGVNHKNLKLRLLASLVSLLLVLLVQV*
CDS seq >EER97817
ATGGCGCCTGCCGGGCGGCTCCTCGCGGTAGCCGCCCTCTCCTTCCTCTGTTTGCAGGGGCTGTGGGGCGATTCAGGCAG
CGCATTGGCTCAGAGCCAGCCGCCGCTTCACCGGATCGTTCGCGCAGAGGCAAATGACGGCGGCGGCGGCGGCCTCATGC
CGGAGCTCCCGCCCAGTGGCTTCATGCCCATGCCGGACCTCTCACCCTCACCCAGCGGCTCCCCGAGGCCATTTGTTCCC
TTCCTGGCTCCCGCACCACTCGCGCCCTTCTTTAACAACAGCACGCCAAAGCTCTCAGGGAAATGCACACTCAACTTTAC
CGCTGTCGACAAACTCATGACCACCACGGCTGTCGACTGCTTCACCTCGTTTGCACCTTTCTTGGCCAATGTCATCTGCT
GCCCGCAGCTTCAGGCAACACTGACCATCCTCATAGGGCAGTCTAGCAAGCAGACAGGGTCTCTCGCATTGGATCCCACG
GTGGCCAACTACTGCCTGTCGGATGTCCAGGAGCTGTTGTTGAGCCAAGGCGCCAGTGATAATCTCCATAGCCTTTGCTC
GGTTCACCTCTCGAATGTAACTGAGGGGTCCTGCCCTGTTAGCACTGTGGATTCGTTTGAGAGCGTCGTTGATTCGTCCA
AGCTCCTTGAGGCCTGTCGGAAGATCGACTCTGTTAATGAGTGCTGCAGCCAGACATGCCAGAATGCGATAAATGAAGCT
GCCCAGAAAATCTCGTCTAAGGATGGAGGTTTGACGACCTACCCTGGGAGCCCCAAGGTTGACAGTTGCAGGAACGTAGT
TCTGAGATGGTTGTCAAGCAGGCTTGACCCACAGTCCGCGAAGGAAATGTTGAGGCAGATATCTAACTGTAATGTCAATG
GAGTTTGTCCGCTAAGTTTTCCAGACACAAGTAAGGTGGCAAAAGAGTGTGGTGGAACGATGAAGAACAGTACTGCATGT
TGCAAGGCTATGTTAACTTATGTAGCCCATTTGCAAAAGCAAAGCTTCATAACAAACTTGCAAGCTTTAAATTGTGCTTC
TTTCCTTGGGGCAAAGTTGCAAAAGATGAATGTTAGCACGAATGTCTATAGCTCTTGTCAAATAACACTAAAAGATTTTT
CACTTCAAGTTGGATCTCAAGAATCTGGATGCCTCCTTCCAAGTATGCCCTCTGATGCATCTTTCGACAGCACTTCTGGG
ATTAGCTTCACATGTGATCTGAATGACAACATTGCTGCTCCATGGCCATCTTCCATGCAAGCACCATCTTCATCATGCAA
CAAGTCTGTCAATATCCCAGAGCGACCCGCTGCGACATCGGCACAAAATGGTGTGAACCACAAGAACCTGAAGCTAAGGC
TGCTTGCTTCTTTGGTCTCCCTTCTTCTGGTGCTCTTGGTACAAGTTTAG
Sb_2:307885-307896:- does not have available information here.