
Microexon ID | Sb_2:307885-307896:- |
Species | Sorghum Bicolor | Coordinates | 2:307885..307896 |
Microexon Cluster ID | MEP30 |
Size | 12 |
Phase | 1 |
Pfam Domain Motif | SPARK |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,12,47 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | RATGTYTAYRRYCTTTGTCATATAASCCTSAARGAYTTYTCYCTYCAAGTTGGAWMWCAAGARTCTGGWTGYCTWYTDCCAAGYTTGCCTTCAGATGCAAYATTTGAY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTGGATCTCAAG |
Microexon Amino Acid seq | VGSQE |
Microexon-tag DNA Seq | AATGTCTATAGCTCTTGTCAAATAACACTAAAAGATTTTTCACTTCAAGTTGGATCTCAAGAATCTGGATGCCTCCTTCCAAGTATGCCCTCTGATGCATCTTTCGAC |
Microexon-tag Amino Acid Seq | NVYSSCQITLKDFSLQVGSQESGCLLPSMPSDASFD |
Microexon-tag spanning region | 307237-308096 |
Microexon-tag prediction score | 0.9684 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | EER97817x |
Reference Transcript ID | EER97817 |
Gene ID | SORBI_3002G002100 |
Gene Name | NA |
Transcript ID | EER97817 |
Protein ID | |
Gene ID | SORBI_3002G002100 |
Gene Name | |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >EER97817 MAPAGRLLAVAALSFLCLQGLWGDSGSALAQSQPPLHRIVRAEANDGGGGGLMPELPPSGFMPMPDLSPSPSGSPRPFVP FLAPAPLAPFFNNSTPKLSGKCTLNFTAVDKLMTTTAVDCFTSFAPFLANVICCPQLQATLTILIGQSSKQTGSLALDPT VANYCLSDVQELLLSQGASDNLHSLCSVHLSNVTEGSCPVSTVDSFESVVDSSKLLEACRKIDSVNECCSQTCQNAINEA AQKISSKDGGLTTYPGSPKVDSCRNVVLRWLSSRLDPQSAKEMLRQISNCNVNGVCPLSFPDTSKVAKECGGTMKNSTAC CKAMLTYVAHLQKQSFITNLQALNCASFLGAKLQKMNVSTNVYSSCQITLKDFSLQVGSQESGCLLPSMPSDASFDSTSG ISFTCDLNDNIAAPWPSSMQAPSSSCNKSVNIPERPAATSAQNGVNHKNLKLRLLASLVSLLLVLLVQV* |
CDS seq | >EER97817 ATGGCGCCTGCCGGGCGGCTCCTCGCGGTAGCCGCCCTCTCCTTCCTCTGTTTGCAGGGGCTGTGGGGCGATTCAGGCAG CGCATTGGCTCAGAGCCAGCCGCCGCTTCACCGGATCGTTCGCGCAGAGGCAAATGACGGCGGCGGCGGCGGCCTCATGC CGGAGCTCCCGCCCAGTGGCTTCATGCCCATGCCGGACCTCTCACCCTCACCCAGCGGCTCCCCGAGGCCATTTGTTCCC TTCCTGGCTCCCGCACCACTCGCGCCCTTCTTTAACAACAGCACGCCAAAGCTCTCAGGGAAATGCACACTCAACTTTAC CGCTGTCGACAAACTCATGACCACCACGGCTGTCGACTGCTTCACCTCGTTTGCACCTTTCTTGGCCAATGTCATCTGCT GCCCGCAGCTTCAGGCAACACTGACCATCCTCATAGGGCAGTCTAGCAAGCAGACAGGGTCTCTCGCATTGGATCCCACG GTGGCCAACTACTGCCTGTCGGATGTCCAGGAGCTGTTGTTGAGCCAAGGCGCCAGTGATAATCTCCATAGCCTTTGCTC GGTTCACCTCTCGAATGTAACTGAGGGGTCCTGCCCTGTTAGCACTGTGGATTCGTTTGAGAGCGTCGTTGATTCGTCCA AGCTCCTTGAGGCCTGTCGGAAGATCGACTCTGTTAATGAGTGCTGCAGCCAGACATGCCAGAATGCGATAAATGAAGCT GCCCAGAAAATCTCGTCTAAGGATGGAGGTTTGACGACCTACCCTGGGAGCCCCAAGGTTGACAGTTGCAGGAACGTAGT TCTGAGATGGTTGTCAAGCAGGCTTGACCCACAGTCCGCGAAGGAAATGTTGAGGCAGATATCTAACTGTAATGTCAATG GAGTTTGTCCGCTAAGTTTTCCAGACACAAGTAAGGTGGCAAAAGAGTGTGGTGGAACGATGAAGAACAGTACTGCATGT TGCAAGGCTATGTTAACTTATGTAGCCCATTTGCAAAAGCAAAGCTTCATAACAAACTTGCAAGCTTTAAATTGTGCTTC TTTCCTTGGGGCAAAGTTGCAAAAGATGAATGTTAGCACGAATGTCTATAGCTCTTGTCAAATAACACTAAAAGATTTTT CACTTCAAGTTGGATCTCAAGAATCTGGATGCCTCCTTCCAAGTATGCCCTCTGATGCATCTTTCGACAGCACTTCTGGG ATTAGCTTCACATGTGATCTGAATGACAACATTGCTGCTCCATGGCCATCTTCCATGCAAGCACCATCTTCATCATGCAA CAAGTCTGTCAATATCCCAGAGCGACCCGCTGCGACATCGGCACAAAATGGTGTGAACCACAAGAACCTGAAGCTAAGGC TGCTTGCTTCTTTGGTCTCCCTTCTTCTGGTGCTCTTGGTACAAGTTTAG |
Sb_2:307885-307896:- does not have available information here.