| Microexon ID | Pt_4:1177273-1177284:+ |
| Species | Populus Trichocarpa | Coordinates | 4:1177273..1177284 |
| Microexon Cluster ID | MEP30 |
| Size | 12 |
| Phase | 1 |
| Pfam Domain Motif | SPARK |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,12,47 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | RATGTYTAYRRYCTTTGTCATATAASCCTSAARGAYTTYTCYCTYCAAGTTGGAWMWCAAGARTCTGGWTGYCTWYTDCCAAGYTTGCCTTCAGATGCAAYATTTGAY |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | TTGCAAAACAAG |
| Microexon Amino Acid seq | VAKQE |
| Microexon-tag DNA Seq | GATGTTTATAGCCTTTGTCACATAACCCTTAAGGATTTCTCCCTTCAAGTTGCAAAACAAGAGTCTGGATGCCTTCTACCAAGCTTGCCGTCAGATGCAACATTTGAC |
| Microexon-tag Amino Acid Seq | DVYSLCHITLKDFSLQVAKQESGCLLPSLPSDATFD |
| Microexon-tag spanning region | 1177035-1177634 |
| Microexon-tag prediction score | 0.9821 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | Potri.004G016000.1.v4.1x |
| Reference Transcript ID | Potri.004G016000.1.v4.1 |
| Gene ID | Potri.004G016000.v4.1 |
| Gene Name | NA |
| Transcript ID | Potri.004G016000.1.v4.1 |
| Protein ID | |
| Gene ID | Potri.004G016000.v4.1 |
| Gene Name | |
| Pfam domain motif | Unknown |
| Motif E-value | NA |
| Motif start | NA |
| Motif end | NA |
| Protein seq | >Potri.004G016000.1.v4.1 MSEGVSLKVKLSLSMVFVEVFLLILSLNECHCSPFNNHGGSLSTDRRVDGFLPEISPNSAPQPLLPLLAPSPFAPFTNIT IPKLSGQCTLNFTAAQSLMRTTSTDCWSIFAPLLANVICCPQLEATLAILMGQSSKDTRTLALNETVSKHCLSDIEQILA GQGAESNVNKICSIHLSNLTGGSCPVKDVNEFEGTVDSSKLLAACENIDPVKECCDQVCQNSILETATKLALKASEVLII AGSHGLTEHSTKVDDCKHIVLRWLAGKLEPSRAKEVLRGLSNCKVNKVCPLVFPDMRHVAKGCGNEISNETECCRAMESY VSHLQKQSLITNLQALDCATTLGMKLQRSNITKDVYSLCHITLKDFSLQVAKQESGCLLPSLPSDATFDHSSGISFICDL NDNIPAPWPSKSQLSAPCNKTIKIPALPAAANAQSGLYNEDVVIYVLFAASAVTMMLL* |
| CDS seq | >Potri.004G016000.1.v4.1 ATGAGTGAAGGGGTGTCTCTCAAGGTGAAGCTGAGTCTGAGTATGGTTTTTGTGGAGGTGTTTCTTTTGATTTTGAGTCT GAATGAATGTCACTGCAGCCCATTCAATAATCATGGAGGCTCATTGTCAACTGACAGAAGAGTGGATGGTTTTCTGCCTG AGATCTCTCCAAATTCAGCTCCTCAGCCCCTTCTTCCTCTTCTTGCACCTTCTCCTTTCGCACCTTTCACAAACATTACT ATCCCAAAGTTATCAGGACAATGCACGTTGAATTTCACTGCTGCTCAAAGTTTGATGAGAACGACATCAACTGATTGTTG GTCTATTTTTGCGCCATTGCTGGCTAATGTTATATGCTGTCCCCAGTTAGAAGCCACCCTTGCAATTCTTATGGGCCAAT CCAGTAAAGATACCAGAACTCTTGCTTTAAATGAGACTGTTTCAAAGCATTGCCTTTCAGATATCGAGCAAATTTTGGCT GGTCAGGGTGCAGAAAGTAATGTGAATAAGATATGCTCAATTCATCTATCAAATCTCACTGGAGGGTCTTGCCCTGTTAA GGATGTCAATGAATTTGAGGGCACTGTGGATTCTTCTAAGCTTCTTGCTGCCTGCGAGAATATTGATCCCGTTAAAGAAT GTTGTGATCAAGTTTGTCAAAATTCCATATTAGAAACTGCTACAAAACTTGCACTAAAAGCTTCTGAAGTATTGATCATA GCTGGGTCCCATGGTTTAACTGAGCACTCAACAAAGGTTGATGATTGTAAACATATTGTACTTCGATGGCTGGCTGGTAA ACTTGAGCCTTCCCGTGCAAAGGAGGTTCTCAGAGGACTATCTAATTGCAAAGTTAATAAAGTTTGCCCTCTGGTTTTCC CTGACATGAGACATGTTGCAAAGGGCTGTGGGAATGAGATTAGTAACGAGACAGAATGCTGTCGTGCCATGGAGAGCTAT GTGTCTCACTTGCAGAAGCAGAGTCTTATAACTAACTTGCAAGCTCTGGATTGTGCTACAACTCTAGGAATGAAGTTACA GAGGTCTAATATTACAAAAGATGTTTATAGCCTTTGTCACATAACCCTTAAGGATTTCTCCCTTCAAGTTGCAAAACAAG AGTCTGGATGCCTTCTACCAAGCTTGCCGTCAGATGCAACATTTGACCATTCCTCAGGGATCAGCTTCATCTGTGATTTG AATGACAATATTCCTGCTCCATGGCCGTCAAAGTCTCAGTTATCAGCACCGTGCAATAAAACCATCAAAATCCCAGCACT TCCTGCTGCTGCAAATGCTCAAAGTGGTCTTTACAATGAAGATGTGGTAATTTATGTGCTGTTTGCTGCCTCAGCTGTTA CCATGATGCTCTTGTAG |
Pt_4:1177273-1177284:+ does not have available information here.