
Microexon ID | Ps_NC_039367.1:54911759-54911770:+ |
Species | Papaver somniferum | Coordinates | NC_039367.1:54911759..54911770 |
Microexon Cluster ID | MEP30 |
Size | 12 |
Phase | 1 |
Pfam Domain Motif | SPARK |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,12,47 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | RATGTYTAYRRYCTTTGTCATATAASCCTSAARGAYTTYTCYCTYCAAGTTGGAWMWCAAGARTCTGGWTGYCTWYTDCCAAGYTTGCCTTCAGATGCAAYATTTGAY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTGGAACACAAG |
Microexon Amino Acid seq | VGTQE |
Microexon-tag DNA Seq | AACATCTATGGGCTTTGCCATATAACCCTCAAAGATTTCTCTCTCCAAGTTGGAACACAAGAATCTGGTTGCCTTCTGCCGAGCTTGCCTTCAGATGCAACATTTGAC |
Microexon-tag Amino Acid Seq | NIYGLCHITLKDFSLQVGTQESGCLLPSLPSDATFD |
Microexon-tag spanning region | 54911560-54911930 |
Microexon-tag prediction score | 0.9791 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026567696.1x |
Reference Transcript ID | XM_026567696.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026567696.1 |
Protein ID | XP_026423481.1 |
Gene ID | LOC113319438 |
Gene Name | NA |
Pfam domain motif | SPARK |
Motif E-value | 0.91 |
Motif start | 280 |
Motif end | 371 |
Protein seq | >XP_026423481.1 MRERLPLNRNNALLKLFLLSLWLYTSNCTLVEYPQDSNSTQKKGDDFLPVEPPSEEPQPFLPFLAPSPLAPFTNQSVPHL SGHCTLNFSVAESMLSMTAIDCWDFFAPFLANVICCPQLDATLAVLVGQSSKDTKMLALNVTHAKHCLSDVDRILVGQGA SRDLRKVCSVRPSNLTEASCPVKTVSDFENTVDSSELLLACEKLDPVNECCTQTCENAISEAARSIALKGYGLSDVSHVV PENSSRIDDCKIIVRRWLTSKLDPSAAKKVLRGLSNCNVNKACPLVFPNTKGVAKHCGDEISNQTACCNAMESYVTHLQK QSFITNLQALDCAALLGVKLHKSNITRNIYGLCHITLKDFSLQVGTQESGCLLPSLPSDATFDKSSGISFLCDLNDNIAA PWPSTTQLPSSSCNKTVKIPALPAATSGQSGMRLTTDHNRSVHICIILYLVLFYFFLFDC* |
CDS seq | >XM_026567696.1 ATGAGAGAGAGACTACCACTAAATCGGAATAATGCTCTACTGAAGCTCTTTCTCTTGTCTCTCTGGTTATATACTTCAAA TTGCACCCTTGTGGAATATCCGCAAGATTCCAACTCAACGCAAAAGAAAGGTGATGATTTTTTACCTGTGGAACCCCCTA GCGAGGAACCTCAACCCTTTCTCCCATTTTTAGCACCTTCTCCACTGGCACCTTTCACAAACCAAAGTGTACCACACTTA TCAGGACATTGTACCTTAAATTTTTCCGTTGCTGAAAGTATGCTGAGCATGACCGCAATTGATTGCTGGGATTTCTTTGC TCCATTTCTGGCCAATGTAATATGTTGTCCACAGTTGGATGCGACTCTTGCTGTTCTTGTTGGGCAGTCCAGTAAGGATA CTAAAATGCTTGCTTTGAATGTGACTCACGCAAAGCACTGCCTCTCAGATGTTGATCGGATTCTAGTGGGTCAAGGTGCC AGCAGGGATCTCCGAAAGGTATGCTCAGTTCGTCCTTCAAACCTCACTGAAGCCTCTTGCCCAGTCAAAACAGTTAGCGA TTTTGAGAACACCGTTGATTCGTCTGAGCTTCTTCTTGCCTGTGAGAAACTTGATCCTGTGAACGAGTGTTGCACCCAAA CTTGTGAGAATGCAATATCAGAAGCTGCACGAAGTATTGCTCTGAAAGGTTATGGTCTATCTGACGTGTCTCATGTCGTC CCTGAGAACTCCTCCAGAATTGATGATTGTAAAATCATTGTCCGCCGGTGGCTGACAAGTAAACTTGATCCTTCTGCTGC TAAGAAAGTTCTGAGAGGACTTTCTAACTGCAACGTGAATAAAGCCTGTCCACTGGTTTTTCCTAATACCAAAGGTGTTG CCAAGCATTGTGGAGATGAAATCAGCAACCAGACTGCTTGCTGCAATGCCATGGAGAGTTACGTGACTCATTTGCAAAAG CAAAGTTTCATAACTAATTTGCAAGCATTGGACTGTGCTGCTTTACTTGGCGTGAAATTACATAAATCTAATATTACTAG AAACATCTATGGGCTTTGCCATATAACCCTCAAAGATTTCTCTCTCCAAGTTGGAACACAAGAATCTGGTTGCCTTCTGC CGAGCTTGCCTTCAGATGCAACATTTGACAAATCTTCAGGGATTAGTTTTCTTTGTGACCTGAATGACAATATTGCTGCT CCTTGGCCCTCTACAACTCAATTACCTTCTTCATCCTGCAATAAGACAGTCAAGATTCCTGCACTTCCAGCTGCAACATC TGGACAGAGTGGTATGAGACTAACAACAGATCATAACAGATCTGTGCATATATGTATTATACTTTATTTAGTTTTGTTTT ACTTTTTCTTATTTGATTGCTGA |
Microexon DNA seq | TTGGAACACAAG |
Microexon Amino Acid seq | VGTQE |
Microexon-tag DNA Seq | AACATCTATGGGCTTTGCCATATAACCCTCAAAGATTTCTCTCTCCAAGTTGGAACACAAGAATCTGGTTGCCTTCTGCCGAGCTTGCCTTCAGATGCAACATTTGAC |
Microexon-tag Amino Acid seq | NIYGLCHITLKDFSLQVGTQESGCLLPSLPSDATFD |
Transcript ID | XM_026567696.1 |
Gene ID | Ps.60929 |
Gene Name | NA |
Pfam domain motif | SPARK |
Motif E-value | 0.92 |
Motif start | 280 |
Motif end | 371 |
Protein seq | >XM_026567696.1 MRERLPLNRNNALLKLFLLSLWLYTSNCTLVEYPQDSNSTQKKGDDFLPVEPPSEEPQPFLPFLAPSPLAPFTNQSVPHL SGHCTLNFSVAESMLSMTAIDCWDFFAPFLANVICCPQLDATLAVLVGQSSKDTKMLALNVTHAKHCLSDVDRILVGQGA SRDLRKVCSVRPSNLTEASCPVKTVSDFENTVDSSELLLACEKLDPVNECCTQTCENAISEAARSIALKGYGLSDVSHVV PENSSRIDDCKIIVRRWLTSKLDPSAAKKVLRGLSNCNVNKACPLVFPNTKGVAKHCGDEISNQTACCNAMESYVTHLQK QSFITNLQALDCAALLGVKLHKSNITRNIYGLCHITLKDFSLQVGTQESGCLLPSLPSDATFDKSSGISFLCDLNDNIAA PWPSTTQLPSSSCNKTVKIPALPAATSGQSGMRLTTDHNRSVHICIILYLVLFYFFLFDC* |
CDS seq | >XM_026567696.1 ATGAGAGAGAGACTACCACTAAATCGGAATAATGCTCTACTGAAGCTCTTTCTCTTGTCTCTCTGGTTATATACTTCAAA TTGCACCCTTGTGGAATATCCGCAAGATTCCAACTCAACGCAAAAGAAAGGTGATGATTTTTTACCTGTGGAACCCCCTA GCGAGGAACCTCAACCCTTTCTCCCATTTTTAGCACCTTCTCCACTGGCACCTTTCACAAACCAAAGTGTACCACACTTA TCAGGACATTGTACCTTAAATTTTTCCGTTGCTGAAAGTATGCTGAGCATGACCGCAATTGATTGCTGGGATTTCTTTGC TCCATTTCTGGCCAATGTAATATGTTGTCCACAGTTGGATGCGACTCTTGCTGTTCTTGTTGGGCAGTCCAGTAAGGATA CTAAAATGCTTGCTTTGAATGTGACTCACGCAAAGCACTGCCTCTCAGATGTTGATCGGATTCTAGTGGGTCAAGGTGCC AGCAGGGATCTCCGAAAGGTATGCTCAGTTCGTCCTTCAAACCTCACTGAAGCCTCTTGCCCAGTCAAAACAGTTAGCGA TTTTGAGAACACCGTTGATTCGTCTGAGCTTCTTCTTGCCTGTGAGAAACTTGATCCTGTGAACGAGTGTTGCACCCAAA CTTGTGAGAATGCAATATCAGAAGCTGCACGAAGTATTGCTCTGAAAGGTTATGGTCTATCTGACGTGTCTCATGTCGTC CCTGAGAACTCCTCCAGAATTGATGATTGTAAAATCATTGTCCGCCGGTGGCTGACAAGTAAACTTGATCCTTCTGCTGC TAAGAAAGTTCTGAGAGGACTTTCTAACTGCAACGTGAATAAAGCCTGTCCACTGGTTTTTCCTAATACCAAAGGTGTTG CCAAGCATTGTGGAGATGAAATCAGCAACCAGACTGCTTGCTGCAATGCCATGGAGAGTTACGTGACTCATTTGCAAAAG CAAAGTTTCATAACTAATTTGCAAGCATTGGACTGTGCTGCTTTACTTGGCGTGAAATTACATAAATCTAATATTACTAG AAACATCTATGGGCTTTGCCATATAACCCTCAAAGATTTCTCTCTCCAAGTTGGAACACAAGAATCTGGTTGCCTTCTGC CGAGCTTGCCTTCAGATGCAACATTTGACAAATCTTCAGGGATTAGTTTTCTTTGTGACCTGAATGACAATATTGCTGCT CCTTGGCCCTCTACAACTCAATTACCTTCTTCATCCTGCAATAAGACAGTCAAGATTCCTGCACTTCCAGCTGCAACATC TGGACAGAGTGGTATGAGACTAACAACAGATCATAACAGATCTGTGCATATATGTATTATACTTTATTTAGTTTTGTTTT ACTTTTTCTTATTTGATTGCTGA |