
Microexon ID | Os_7:140932-140943:- |
Species | Oryza sativa | Coordinates | 7:140932..140943 |
Microexon Cluster ID | MEP30 |
Size | 12 |
Phase | 1 |
Pfam Domain Motif | SPARK |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,12,47 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | RATGTYTAYRRYCTTTGTCATATAASCCTSAARGAYTTYTCYCTYCAAGTTGGAWMWCAAGARTCTGGWTGYCTWYTDCCAAGYTTGCCTTCAGATGCAAYATTTGAY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTGGATCTCAAG |
Microexon Amino Acid seq | VGSQE |
Microexon-tag DNA Seq | AATGTTTATAGCTCATGTCAGATAACTCTCAAGGACTTTTCTCTTCAAGTTGGATCTCAAGAATCTGGATGCCTTCTTCCAAGTATGCCCTCGGATGCATCTTTTGAC |
Microexon-tag Amino Acid Seq | NVYSSCQITLKDFSLQVGSQESGCLLPSMPSDASFD |
Microexon-tag spanning region | 135610-141146 |
Microexon-tag prediction score | 0.9735 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Os07t0102300-01x |
Reference Transcript ID | Os07t0102300-01 |
Gene ID | Os07g0102300 |
Gene Name | SRL1 |
Transcript ID | Os07t0102300-01 |
Protein ID | Os07t0102300-01 |
Gene ID | Os07g0102300 |
Gene Name | SRL1 |
Pfam domain motif | SPARK |
Motif E-value | 0.059 |
Motif start | 265 |
Motif end | 356 |
Protein seq | >Os07t0102300-01 MGMAPAGRLLLISCLLCVPNSFGFAFAVEEEEDGSGLMPQLSPTGSPNPLVPFLAPAPLAPFFNTTPPNLSGKCSLNFTA VGDLITTTAVDCFASFAPFLANVICCPQLQAMLTILIGQSSKQTGSLALDPTVATYCLSDVQQLLLSQGASDELHNICSL HLSNVTEGSCPVSTVDAFEAVIDSSKLLEACHKIDPVNECCSRTCQNAINDASQKISFKDGGLTSYAGSPKVDSCRNVVL RWLSSRLGPSSAKQMLRQISNCNVNGVCPLSFPDTSKVAKECSGTVKNGTSCCKAMDSYVSHLQKQSFITNLQALDCAQF LGDKLQKMNVSMNVYSSCQITLKDFSLQVGSQESGCLLPSMPSDASFDPATGISFTCDLNDNIAAPWPSSMQASSSSCNK SVNIPERPAATSAQNGVNQNRLELSLLIYLGTLVVAIWLQV* |
CDS seq | >Os07t0102300-01 ATGGGGATGGCCCCCGCCGGTCGCCTCCTCCTCATCTCCTGCCTCCTCTGTGTGCCCAATTCATTTGGATTTGCATTTGC TGTGGAGGAGGAGGAGGACGGCAGCGGGCTGATGCCACAGCTCTCACCCACCGGCTCTCCCAACCCCTTGGTTCCCTTCC TCGCGCCCGCCCCTCTCGCGCCATTCTTCAACACCACCCCTCCTAACTTGTCAGGCAAGTGCTCATTGAATTTTACTGCT GTCGGTGACCTCATCACCACCACTGCTGTCGACTGCTTTGCGTCCTTCGCCCCGTTCCTCGCCAATGTCATCTGCTGCCC CCAGCTCCAGGCCATGCTCACCATCCTCATTGGGCAGTCCAGCAAGCAGACTGGCTCCCTTGCTTTGGATCCCACCGTCG CTACCTACTGCCTCTCCGATGTTCAGCAGCTATTGTTGAGCCAGGGCGCTAGTGATGAGCTCCACAACATTTGCTCCCTT CACCTCTCCAATGTCACCGAGGGATCATGCCCCGTTAGCACCGTCGATGCCTTTGAAGCTGTCATCGACTCCTCAAAGCT CCTCGAGGCCTGTCACAAGATTGATCCTGTCAACGAGTGCTGCAGCCGCACCTGCCAGAATGCTATCAACGATGCCTCCC AGAAGATCTCTTTCAAAGACGGCGGTTTGACAAGCTACGCTGGTAGCCCCAAAGTTGATAGCTGCAGGAATGTCGTGCTC AGATGGCTATCCAGTAGGCTTGGCCCATCATCTGCAAAGCAAATGCTCAGGCAGATATCTAACTGCAATGTCAATGGAGT TTGTCCACTAAGCTTTCCAGACACGAGTAAAGTGGCAAAAGAGTGCAGTGGAACTGTCAAGAATGGTACTTCATGTTGCA AGGCTATGGACAGTTATGTATCTCACTTGCAAAAGCAAAGCTTCATAACAAATTTGCAAGCTTTAGATTGTGCCCAATTC CTTGGTGACAAGTTGCAAAAGATGAATGTCAGTATGAATGTTTATAGCTCATGTCAGATAACTCTCAAGGACTTTTCTCT TCAAGTTGGATCTCAAGAATCTGGATGCCTTCTTCCAAGTATGCCCTCGGATGCATCTTTTGACCCAGCTACTGGGATTA GTTTCACATGCGATCTGAATGATAATATTGCTGCCCCATGGCCATCTTCTATGCAAGCATCGTCTTCTTCATGCAATAAA TCTGTTAATATTCCAGAGAGACCTGCTGCGACATCGGCACAAAATGGTGTCAACCAGAACAGACTGGAGCTTAGCCTACT TATTTATCTGGGCACCCTTGTTGTTGCTATTTGGCTACAAGTCTAG |
Microexon DNA seq | TTGGATCTCAAG |
Microexon Amino Acid seq | VGSQE |
Microexon-tag DNA Seq | AATGTTTATAGCTCATGTCAGATAACTCTCAAGGACTTTTCTCTTCAAGTTGGATCTCAAGAATCTGGATGCCTTCTTCCAAGTATGCCCTCGGATGCATCTTTTGAC |
Microexon-tag Amino Acid seq | NVYSSCQITLKDFSLQVGSQESGCLLPSMPSDASFD |
Transcript ID | Os07t0102300-01 |
Gene ID | Os.31078 |
Gene Name | SRL1 |
Pfam domain motif | SPARK |
Motif E-value | 0.069 |
Motif start | 265 |
Motif end | 356 |
Protein seq | >Os07t0102300-01 MGMAPAGRLLLISCLLCVPNSFGFAFAVEEEEDGSGLMPQLSPTGSPNPLVPFLAPAPLAPFFNTTPPNLSGKCSLNFTA VGDLITTTAVDCFASFAPFLANVICCPQLQAMLTILIGQSSKQTGSLALDPTVATYCLSDVQQLLLSQGASDELHNICSL HLSNVTEGSCPVSTVDAFEAVIDSSKLLEACHKIDPVNECCSRTCQNAINDASQKISFKDGGLTSYAGSPKVDSCRNVVL RWLSSRLGPSSAKQMLRQISNCNVNGVCPLSFPDTSKVAKECSGTVKNGTSCCKAMDSYVSHLQKQSFITNLQALDCAQF LGDKLQKMNVSMNVYSSCQITLKDFSLQVGSQESGCLLPSMPSDASFDPATGISFTCDLNDNIAAPWPSSMQASSSSCNK SVNIPERPAATSAQNGVNQNRLELSLLIYLGTLVVAIWLQV* |
CDS seq | >Os07t0102300-01 ATGGGGATGGCCCCCGCCGGTCGCCTCCTCCTCATCTCCTGCCTCCTCTGTGTGCCCAATTCATTTGGATTTGCATTTGC TGTGGAGGAGGAGGAGGACGGCAGCGGGCTGATGCCACAGCTCTCACCCACCGGCTCTCCCAACCCCTTGGTTCCCTTCC TCGCGCCCGCCCCTCTCGCGCCATTCTTCAACACCACCCCTCCTAACTTGTCAGGCAAGTGCTCATTGAATTTTACTGCT GTCGGTGACCTCATCACCACCACTGCTGTCGACTGCTTTGCGTCCTTCGCCCCGTTCCTCGCCAATGTCATCTGCTGCCC CCAGCTCCAGGCCATGCTCACCATCCTCATTGGGCAGTCCAGCAAGCAGACTGGCTCCCTTGCTTTGGATCCCACCGTCG CTACCTACTGCCTCTCCGATGTTCAGCAGCTATTGTTGAGCCAGGGCGCTAGTGATGAGCTCCACAACATTTGCTCCCTT CACCTCTCCAATGTCACCGAGGGATCATGCCCCGTTAGCACCGTCGATGCCTTTGAAGCTGTCATCGACTCCTCAAAGCT CCTCGAGGCCTGTCACAAGATTGATCCTGTCAACGAGTGCTGCAGCCGCACCTGCCAGAATGCTATCAACGATGCCTCCC AGAAGATCTCTTTCAAAGACGGCGGTTTGACAAGCTACGCTGGTAGCCCCAAAGTTGATAGCTGCAGGAATGTCGTGCTC AGATGGCTATCCAGTAGGCTTGGCCCATCATCTGCAAAGCAAATGCTCAGGCAGATATCTAACTGCAATGTCAATGGAGT TTGTCCACTAAGCTTTCCAGACACGAGTAAAGTGGCAAAAGAGTGCAGTGGAACTGTCAAGAATGGTACTTCATGTTGCA AGGCTATGGACAGTTATGTATCTCACTTGCAAAAGCAAAGCTTCATAACAAATTTGCAAGCTTTAGATTGTGCCCAATTC CTTGGTGACAAGTTGCAAAAGATGAATGTCAGTATGAATGTTTATAGCTCATGTCAGATAACTCTCAAGGACTTTTCTCT TCAAGTTGGATCTCAAGAATCTGGATGCCTTCTTCCAAGTATGCCCTCGGATGCATCTTTTGACCCAGCTACTGGGATTA GTTTCACATGCGATCTGAATGATAATATTGCTGCCCCATGGCCATCTTCTATGCAAGCATCGTCTTCTTCATGCAATAAA TCTGTTAATATTCCAGAGAGACCTGCTGCGACATCGGCACAAAATGGTGTCAACCAGAACAGACTGGAGCTTAGCCTACT TATTTATCTGGGCACCCTTGTTGTTGCTATTTGGCTACAAGTCTAG |