Microexon ID Os_7:140932-140943:-
Species Oryza sativa
Coordinates 7:140932..140943
Microexon Cluster ID MEP30
Size 12
Phase 1
Pfam Domain Motif SPARK
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,12,47
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq RATGTYTAYRRYCTTTGTCATATAASCCTSAARGAYTTYTCYCTYCAAGTTGGAWMWCAAGARTCTGGWTGYCTWYTDCCAAGYTTGCCTTCAGATGCAAYATTTGAY
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TTGGATCTCAAG
Microexon Amino Acid seq VGSQE
Microexon-tag DNA Seq AATGTTTATAGCTCATGTCAGATAACTCTCAAGGACTTTTCTCTTCAAGTTGGATCTCAAGAATCTGGATGCCTTCTTCCAAGTATGCCCTCGGATGCATCTTTTGAC
Microexon-tag Amino Acid Seq NVYSSCQITLKDFSLQVGSQESGCLLPSMPSDASFD
Microexon-tag spanning region135610-141146
Microexon-tag prediction score0.9735
Overlapped with the annotated transcript (%) 100
New Transcript ID Os07t0102300-01x
Reference Transcript ID Os07t0102300-01
Gene ID Os07g0102300
Gene Name SRL1
Transcript ID Os07t0102300-01
Protein ID Os07t0102300-01
Gene ID Os07g0102300
Gene Name SRL1
Pfam domain motif SPARK
Motif E-value 0.059
Motif start 265
Motif end 356
Protein seq >Os07t0102300-01
MGMAPAGRLLLISCLLCVPNSFGFAFAVEEEEDGSGLMPQLSPTGSPNPLVPFLAPAPLAPFFNTTPPNLSGKCSLNFTA
VGDLITTTAVDCFASFAPFLANVICCPQLQAMLTILIGQSSKQTGSLALDPTVATYCLSDVQQLLLSQGASDELHNICSL
HLSNVTEGSCPVSTVDAFEAVIDSSKLLEACHKIDPVNECCSRTCQNAINDASQKISFKDGGLTSYAGSPKVDSCRNVVL
RWLSSRLGPSSAKQMLRQISNCNVNGVCPLSFPDTSKVAKECSGTVKNGTSCCKAMDSYVSHLQKQSFITNLQALDCAQF
LGDKLQKMNVSMNVYSSCQITLKDFSLQVGSQESGCLLPSMPSDASFDPATGISFTCDLNDNIAAPWPSSMQASSSSCNK
SVNIPERPAATSAQNGVNQNRLELSLLIYLGTLVVAIWLQV*
CDS seq >Os07t0102300-01
ATGGGGATGGCCCCCGCCGGTCGCCTCCTCCTCATCTCCTGCCTCCTCTGTGTGCCCAATTCATTTGGATTTGCATTTGC
TGTGGAGGAGGAGGAGGACGGCAGCGGGCTGATGCCACAGCTCTCACCCACCGGCTCTCCCAACCCCTTGGTTCCCTTCC
TCGCGCCCGCCCCTCTCGCGCCATTCTTCAACACCACCCCTCCTAACTTGTCAGGCAAGTGCTCATTGAATTTTACTGCT
GTCGGTGACCTCATCACCACCACTGCTGTCGACTGCTTTGCGTCCTTCGCCCCGTTCCTCGCCAATGTCATCTGCTGCCC
CCAGCTCCAGGCCATGCTCACCATCCTCATTGGGCAGTCCAGCAAGCAGACTGGCTCCCTTGCTTTGGATCCCACCGTCG
CTACCTACTGCCTCTCCGATGTTCAGCAGCTATTGTTGAGCCAGGGCGCTAGTGATGAGCTCCACAACATTTGCTCCCTT
CACCTCTCCAATGTCACCGAGGGATCATGCCCCGTTAGCACCGTCGATGCCTTTGAAGCTGTCATCGACTCCTCAAAGCT
CCTCGAGGCCTGTCACAAGATTGATCCTGTCAACGAGTGCTGCAGCCGCACCTGCCAGAATGCTATCAACGATGCCTCCC
AGAAGATCTCTTTCAAAGACGGCGGTTTGACAAGCTACGCTGGTAGCCCCAAAGTTGATAGCTGCAGGAATGTCGTGCTC
AGATGGCTATCCAGTAGGCTTGGCCCATCATCTGCAAAGCAAATGCTCAGGCAGATATCTAACTGCAATGTCAATGGAGT
TTGTCCACTAAGCTTTCCAGACACGAGTAAAGTGGCAAAAGAGTGCAGTGGAACTGTCAAGAATGGTACTTCATGTTGCA
AGGCTATGGACAGTTATGTATCTCACTTGCAAAAGCAAAGCTTCATAACAAATTTGCAAGCTTTAGATTGTGCCCAATTC
CTTGGTGACAAGTTGCAAAAGATGAATGTCAGTATGAATGTTTATAGCTCATGTCAGATAACTCTCAAGGACTTTTCTCT
TCAAGTTGGATCTCAAGAATCTGGATGCCTTCTTCCAAGTATGCCCTCGGATGCATCTTTTGACCCAGCTACTGGGATTA
GTTTCACATGCGATCTGAATGATAATATTGCTGCCCCATGGCCATCTTCTATGCAAGCATCGTCTTCTTCATGCAATAAA
TCTGTTAATATTCCAGAGAGACCTGCTGCGACATCGGCACAAAATGGTGTCAACCAGAACAGACTGGAGCTTAGCCTACT
TATTTATCTGGGCACCCTTGTTGTTGCTATTTGGCTACAAGTCTAG
Microexon DNA seq TTGGATCTCAAG
Microexon Amino Acid seq VGSQE
Microexon-tag DNA Seq AATGTTTATAGCTCATGTCAGATAACTCTCAAGGACTTTTCTCTTCAAGTTGGATCTCAAGAATCTGGATGCCTTCTTCCAAGTATGCCCTCGGATGCATCTTTTGAC
Microexon-tag Amino Acid seq NVYSSCQITLKDFSLQVGSQESGCLLPSMPSDASFD
Transcript ID Os07t0102300-01
Gene ID Os.31078
Gene Name SRL1
Pfam domain motif SPARK
Motif E-value 0.069
Motif start 265
Motif end 356
Protein seq >Os07t0102300-01
MGMAPAGRLLLISCLLCVPNSFGFAFAVEEEEDGSGLMPQLSPTGSPNPLVPFLAPAPLAPFFNTTPPNLSGKCSLNFTA
VGDLITTTAVDCFASFAPFLANVICCPQLQAMLTILIGQSSKQTGSLALDPTVATYCLSDVQQLLLSQGASDELHNICSL
HLSNVTEGSCPVSTVDAFEAVIDSSKLLEACHKIDPVNECCSRTCQNAINDASQKISFKDGGLTSYAGSPKVDSCRNVVL
RWLSSRLGPSSAKQMLRQISNCNVNGVCPLSFPDTSKVAKECSGTVKNGTSCCKAMDSYVSHLQKQSFITNLQALDCAQF
LGDKLQKMNVSMNVYSSCQITLKDFSLQVGSQESGCLLPSMPSDASFDPATGISFTCDLNDNIAAPWPSSMQASSSSCNK
SVNIPERPAATSAQNGVNQNRLELSLLIYLGTLVVAIWLQV*
CDS seq >Os07t0102300-01
ATGGGGATGGCCCCCGCCGGTCGCCTCCTCCTCATCTCCTGCCTCCTCTGTGTGCCCAATTCATTTGGATTTGCATTTGC
TGTGGAGGAGGAGGAGGACGGCAGCGGGCTGATGCCACAGCTCTCACCCACCGGCTCTCCCAACCCCTTGGTTCCCTTCC
TCGCGCCCGCCCCTCTCGCGCCATTCTTCAACACCACCCCTCCTAACTTGTCAGGCAAGTGCTCATTGAATTTTACTGCT
GTCGGTGACCTCATCACCACCACTGCTGTCGACTGCTTTGCGTCCTTCGCCCCGTTCCTCGCCAATGTCATCTGCTGCCC
CCAGCTCCAGGCCATGCTCACCATCCTCATTGGGCAGTCCAGCAAGCAGACTGGCTCCCTTGCTTTGGATCCCACCGTCG
CTACCTACTGCCTCTCCGATGTTCAGCAGCTATTGTTGAGCCAGGGCGCTAGTGATGAGCTCCACAACATTTGCTCCCTT
CACCTCTCCAATGTCACCGAGGGATCATGCCCCGTTAGCACCGTCGATGCCTTTGAAGCTGTCATCGACTCCTCAAAGCT
CCTCGAGGCCTGTCACAAGATTGATCCTGTCAACGAGTGCTGCAGCCGCACCTGCCAGAATGCTATCAACGATGCCTCCC
AGAAGATCTCTTTCAAAGACGGCGGTTTGACAAGCTACGCTGGTAGCCCCAAAGTTGATAGCTGCAGGAATGTCGTGCTC
AGATGGCTATCCAGTAGGCTTGGCCCATCATCTGCAAAGCAAATGCTCAGGCAGATATCTAACTGCAATGTCAATGGAGT
TTGTCCACTAAGCTTTCCAGACACGAGTAAAGTGGCAAAAGAGTGCAGTGGAACTGTCAAGAATGGTACTTCATGTTGCA
AGGCTATGGACAGTTATGTATCTCACTTGCAAAAGCAAAGCTTCATAACAAATTTGCAAGCTTTAGATTGTGCCCAATTC
CTTGGTGACAAGTTGCAAAAGATGAATGTCAGTATGAATGTTTATAGCTCATGTCAGATAACTCTCAAGGACTTTTCTCT
TCAAGTTGGATCTCAAGAATCTGGATGCCTTCTTCCAAGTATGCCCTCGGATGCATCTTTTGACCCAGCTACTGGGATTA
GTTTCACATGCGATCTGAATGATAATATTGCTGCCCCATGGCCATCTTCTATGCAAGCATCGTCTTCTTCATGCAATAAA
TCTGTTAATATTCCAGAGAGACCTGCTGCGACATCGGCACAAAATGGTGTCAACCAGAACAGACTGGAGCTTAGCCTACT
TATTTATCTGGGCACCCTTGTTGTTGCTATTTGGCTACAAGTCTAG