
Microexon ID | Gm_6:49433207-49433218:- |
Species | Glycine max | Coordinates | 6:49433207..49433218 |
Microexon Cluster ID | MEP30 |
Size | 12 |
Phase | 1 |
Pfam Domain Motif | SPARK |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,12,47 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | RATGTYTAYRRYCTTTGTCATATAASCCTSAARGAYTTYTCYCTYCAAGTTGGAWMWCAAGARTCTGGWTGYCTWYTDCCAAGYTTGCCTTCAGATGCAAYATTTGAY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTGGGTTGCAAG |
Microexon Amino Acid seq | VGLQE |
Microexon-tag DNA Seq | AATGTTTATTATCTTTGTCGTATAAGCCTGAAGGACTTTTCTCTTCAAGTTGGGTTGCAAGAATCTGGCTGCCTTTTGACGAGTTTGCCATCAAATGCAGTATTTGAT |
Microexon-tag Amino Acid Seq | NVYYLCRISLKDFSLQVGLQESGCLLTSLPSNAVFD |
Microexon-tag spanning region | 49432792-49433395 |
Microexon-tag prediction score | 0.9492 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | KRH56126x |
Reference Transcript ID | KRH56126 |
Gene ID | GLYMA_06G305300 |
Gene Name | NA |
Transcript ID | KRH56126 |
Protein ID | KRH56126 |
Gene ID | GLYMA_06G305300 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >KRH56126 MLRSLSDGNHSLPGPTARINDCKNIVLRWLASKLDPSTANSVFRGLSNCNLKEVNSVCPLVFPNVTSVVKECGNLINNQT ACCKAIKSYVSYLQEQSFLTNLQALKCATSLGKKLQEANVSKNVYYLCRISLKDFSLQVGLQESGCLLTSLPSNAVFDGT SGIGFICDLNDNIVAPWPTTSYSLPSSCNRTTKLPSLPTATSSQNGKNHTTVLLQTGFSGLIISSFQSNGSCKI* |
CDS seq | >KRH56126 ATGTTAAGGTCCTTGTCAGATGGAAACCATAGCTTGCCTGGGCCGACCGCTAGGATCAATGATTGCAAGAATATTGTCCT TCGTTGGCTGGCTAGTAAACTTGACCCATCCACTGCAAATAGTGTTTTTAGAGGACTCTCAAACTGCAACCTAAAAGAAG TTAACTCAGTATGCCCATTGGTTTTTCCAAATGTCACAAGTGTTGTGAAAGAATGCGGGAATCTCATAAATAACCAAACA GCTTGCTGCAAAGCCATCAAAAGTTATGTGTCCTATTTGCAAGAGCAGAGCTTTTTAACCAATCTGCAAGCCTTGAAATG TGCTACATCACTTGGAAAGAAATTGCAGGAAGCAAATGTCTCCAAAAATGTTTATTATCTTTGTCGTATAAGCCTGAAGG ACTTTTCTCTTCAAGTTGGGTTGCAAGAATCTGGCTGCCTTTTGACGAGTTTGCCATCAAATGCAGTATTTGATGGAACT TCTGGGATCGGATTCATTTGTGACCTTAATGACAACATTGTAGCTCCATGGCCCACAACATCATATTCACTTCCATCCTC ATGCAATAGAACTACAAAACTTCCATCTCTTCCTACAGCAACGTCTTCACAAAATGGTAAGAACCATACTACTGTACTTC TACAAACTGGTTTTTCAGGTCTGATCATCTCTTCATTTCAAAGCAATGGCAGTTGTAAAATATAG |
Microexon DNA seq | TTGGGTTGCAAG |
Microexon Amino Acid seq | VGLQE |
Microexon-tag DNA Seq | AATGTTTATTATCTTTGTCGTATAAGCCTGAAGGACTTTTCTCTTCAAGTTGGGTTGCAAGAATCTGGCTGCCTTTTGACGAGTTTGCCATCAAATGCAGTATTTGAT |
Microexon-tag Amino Acid seq | NVYYLCRISLKDFSLQVGLQESGCLLTSLPSNAVFD |
Transcript ID | KRH56126 |
Gene ID | Gm.45251 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >KRH56126 MLRSLSDGNHSLPGPTARINDCKNIVLRWLASKLDPSTANSVFRGLSNCNLKEVNSVCPLVFPNVTSVVKECGNLINNQT ACCKAIKSYVSYLQEQSFLTNLQALKCATSLGKKLQEANVSKNVYYLCRISLKDFSLQVGLQESGCLLTSLPSNAVFDGT SGIGFICDLNDNIVAPWPTTSYSLPSSCNRTTKLPSLPTATSSQNGKNHTTVLLQTGFSGLIISSFQSNGSCKI* |
CDS seq | >KRH56126 ATGTTAAGGTCCTTGTCAGATGGAAACCATAGCTTGCCTGGGCCGACCGCTAGGATCAATGATTGCAAGAATATTGTCCT TCGTTGGCTGGCTAGTAAACTTGACCCATCCACTGCAAATAGTGTTTTTAGAGGACTCTCAAACTGCAACCTAAAAGAAG TTAACTCAGTATGCCCATTGGTTTTTCCAAATGTCACAAGTGTTGTGAAAGAATGCGGGAATCTCATAAATAACCAAACA GCTTGCTGCAAAGCCATCAAAAGTTATGTGTCCTATTTGCAAGAGCAGAGCTTTTTAACCAATCTGCAAGCCTTGAAATG TGCTACATCACTTGGAAAGAAATTGCAGGAAGCAAATGTCTCCAAAAATGTTTATTATCTTTGTCGTATAAGCCTGAAGG ACTTTTCTCTTCAAGTTGGGTTGCAAGAATCTGGCTGCCTTTTGACGAGTTTGCCATCAAATGCAGTATTTGATGGAACT TCTGGGATCGGATTCATTTGTGACCTTAATGACAACATTGTAGCTCCATGGCCCACAACATCATATTCACTTCCATCCTC ATGCAATAGAACTACAAAACTTCCATCTCTTCCTACAGCAACGTCTTCACAAAATGGTAAGAACCATACTACTGTACTTC TACAAACTGGTTTTTCAGGTCTGATCATCTCTTCATTTCAAAGCAATGGCAGTTGTAAAATATAG |