
Microexon ID | Gm_15:8411688-8411699:- |
Species | Glycine max | Coordinates | 15:8411688..8411699 |
Microexon Cluster ID | MEP30 |
Size | 12 |
Phase | 1 |
Pfam Domain Motif | SPARK |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,12,47 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | RATGTYTAYRRYCTTTGTCATATAASCCTSAARGAYTTYTCYCTYCAAGTTGGAWMWCAAGARTCTGGWTGYCTWYTDCCAAGYTTGCCTTCAGATGCAAYATTTGAY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTGGAAATCAAG |
Microexon Amino Acid seq | VGNQE |
Microexon-tag DNA Seq | GATGTTTATGGTCTCTGTCACATAAGCCTTAAAGACTTTTCCCTCCAAGTTGGAAATCAAGAGGCTGGTTGTTTATTACCTAGTTTGCCTTCAGATGCTACATTTGAC |
Microexon-tag Amino Acid Seq | DVYGLCHISLKDFSLQVGNQEAGCLLPSLPSDATFD |
Microexon-tag spanning region | 8411363-8411884 |
Microexon-tag prediction score | 0.9682 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | KRH11420x |
Reference Transcript ID | KRH11420 |
Gene ID | GLYMA_15G107200 |
Gene Name | NA |
Transcript ID | KRH11420 |
Protein ID | KRH11420 |
Gene ID | GLYMA_15G107200 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >KRH11420 MLLSLFCAMPHLFLFLFLFLLPLCALESLSSNHRQGPVRLDSRVGSMFIKPSPLGSPQPFLPLAPSPLAPFTNTTIPKLS GLCTLNFTTAESLISVTAIDCWEVFAPFLANVICCPQLEATLTILIGQSSKLTNVLALNGTVAKHCLADVEQILMGQGAT NNLKQNAILEAAKAIASKGSDILAIDAPHVQPEHSNRVNDCRNVVLRWLASKLEPSHAKKVLRGLSNCNVNKACPLVFPN TKQVAKGCVDEISNKTACCNAMESYVSHLQKQSFITNLQALDCAEALAMKLKRSNITADVYGLCHISLKDFSLQVGNQEA GCLLPSLPSDATFDSISGISFLCDLNDNIPAPWPSTSQLTSSSCNKSIYIPALPAAASSQSCLYSRDILFSVLVALLFLL MTTV* |
CDS seq | >KRH11420 ATGCTGCTTTCCCTTTTCTGCGCCATGCCCCACCTCTTCCTCTTCCTCTTCCTCTTCCTCCTGCCTCTCTGTGCACTTGA ATCCCTTAGCAGTAATCATCGTCAGGGTCCTGTACGACTGGATAGCCGTGTAGGTTCTATGTTCATCAAACCCTCACCTC TTGGTTCTCCGCAACCCTTTCTTCCTCTCGCACCTTCACCTTTGGCTCCATTCACTAATACCACTATCCCAAAGTTATCA GGACTTTGCACTTTGAACTTTACTACTGCTGAAAGTTTGATAAGTGTGACAGCAATTGATTGCTGGGAAGTTTTTGCACC ATTTCTGGCTAATGTAATATGTTGTCCCCAATTGGAAGCCACTCTCACAATTCTTATTGGTCAATCCAGTAAACTTACCA ATGTACTTGCCTTAAACGGGACCGTTGCTAAACATTGCCTTGCAGATGTGGAACAAATTTTGATGGGCCAGGGTGCCACT AATAATCTGAAGCAGAATGCTATATTAGAAGCAGCTAAAGCAATTGCATCAAAAGGCTCTGATATTTTGGCCATAGATGC ACCACATGTTCAACCTGAGCACTCAAATCGGGTCAATGATTGTAGAAATGTTGTCCTCCGGTGGTTAGCTAGTAAGCTTG AACCTTCTCATGCCAAGAAAGTTCTTAGAGGACTGTCTAATTGCAACGTGAACAAAGCTTGTCCACTGGTTTTCCCCAAC ACAAAGCAAGTTGCCAAGGGTTGTGTGGATGAGATAAGTAACAAAACAGCATGCTGTAATGCTATGGAAAGCTACGTGTC TCACTTGCAAAAACAGAGCTTCATCACGAACTTGCAAGCTTTGGATTGTGCAGAGGCTTTGGCAATGAAATTGAAAAGAT CGAATATTACTGCAGATGTTTATGGTCTCTGTCACATAAGCCTTAAAGACTTTTCCCTCCAAGTTGGAAATCAAGAGGCT GGTTGTTTATTACCTAGTTTGCCTTCAGATGCTACATTTGACAGTATTTCTGGGATCAGCTTCCTTTGTGATCTAAATGA TAATATTCCAGCTCCTTGGCCTTCTACATCTCAACTGACTTCTTCATCGTGCAATAAATCTATCTACATCCCTGCTCTTC CTGCAGCAGCATCAAGTCAAAGTTGCCTTTACAGCCGTGACATTCTGTTCTCTGTGCTTGTTGCTTTGTTGTTTCTCTTG ATGACAACCGTGTAA |
Microexon DNA seq | TTGGAAATCAAG |
Microexon Amino Acid seq | VGNQE |
Microexon-tag DNA Seq | GATGTTTATGGTCTCTGTCACATAAGCCTTAAAGACTTTTCCCTCCAAGTTGGAAATCAAGAGGCTGGTTGTTTATTACCTAGTTTGCCTTCAGATGCTACATTTGAC |
Microexon-tag Amino Acid seq | DVYGLCHISLKDFSLQVGNQEAGCLLPSLPSDATFD |
Transcript ID | KRH11420 |
Gene ID | Gm.17625 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >KRH11420 MLLSLFCAMPHLFLFLFLFLLPLCALESLSSNHRQGPVRLDSRVGSMFIKPSPLGSPQPFLPLAPSPLAPFTNTTIPKLS GLCTLNFTTAESLISVTAIDCWEVFAPFLANVICCPQLEATLTILIGQSSKLTNVLALNGTVAKHCLADVEQILMGQGAT NNLKQNAILEAAKAIASKGSDILAIDAPHVQPEHSNRVNDCRNVVLRWLASKLEPSHAKKVLRGLSNCNVNKACPLVFPN TKQVAKGCVDEISNKTACCNAMESYVSHLQKQSFITNLQALDCAEALAMKLKRSNITADVYGLCHISLKDFSLQVGNQEA GCLLPSLPSDATFDSISGISFLCDLNDNIPAPWPSTSQLTSSSCNKSIYIPALPAAASSQSCLYSRDILFSVLVALLFLL MTTV* |
CDS seq | >KRH11420 ATGCTGCTTTCCCTTTTCTGCGCCATGCCCCACCTCTTCCTCTTCCTCTTCCTCTTCCTCCTGCCTCTCTGTGCACTTGA ATCCCTTAGCAGTAATCATCGTCAGGGTCCTGTACGACTGGATAGCCGTGTAGGTTCTATGTTCATCAAACCCTCACCTC TTGGTTCTCCGCAACCCTTTCTTCCTCTCGCACCTTCACCTTTGGCTCCATTCACTAATACCACTATCCCAAAGTTATCA GGACTTTGCACTTTGAACTTTACTACTGCTGAAAGTTTGATAAGTGTGACAGCAATTGATTGCTGGGAAGTTTTTGCACC ATTTCTGGCTAATGTAATATGTTGTCCCCAATTGGAAGCCACTCTCACAATTCTTATTGGTCAATCCAGTAAACTTACCA ATGTACTTGCCTTAAACGGGACCGTTGCTAAACATTGCCTTGCAGATGTGGAACAAATTTTGATGGGCCAGGGTGCCACT AATAATCTGAAGCAGAATGCTATATTAGAAGCAGCTAAAGCAATTGCATCAAAAGGCTCTGATATTTTGGCCATAGATGC ACCACATGTTCAACCTGAGCACTCAAATCGGGTCAATGATTGTAGAAATGTTGTCCTCCGGTGGTTAGCTAGTAAGCTTG AACCTTCTCATGCCAAGAAAGTTCTTAGAGGACTGTCTAATTGCAACGTGAACAAAGCTTGTCCACTGGTTTTCCCCAAC ACAAAGCAAGTTGCCAAGGGTTGTGTGGATGAGATAAGTAACAAAACAGCATGCTGTAATGCTATGGAAAGCTACGTGTC TCACTTGCAAAAACAGAGCTTCATCACGAACTTGCAAGCTTTGGATTGTGCAGAGGCTTTGGCAATGAAATTGAAAAGAT CGAATATTACTGCAGATGTTTATGGTCTCTGTCACATAAGCCTTAAAGACTTTTCCCTCCAAGTTGGAAATCAAGAGGCT GGTTGTTTATTACCTAGTTTGCCTTCAGATGCTACATTTGACAGTATTTCTGGGATCAGCTTCCTTTGTGATCTAAATGA TAATATTCCAGCTCCTTGGCCTTCTACATCTCAACTGACTTCTTCATCGTGCAATAAATCTATCTACATCCCTGCTCTTC CTGCAGCAGCATCAAGTCAAAGTTGCCTTTACAGCCGTGACATTCTGTTCTCTGTGCTTGTTGCTTTGTTGTTTCTCTTG ATGACAACCGTGTAA |