| Microexon ID | Bn_scaffoldC01:39801989-39802000:- |
| Species | Brassica Napus | Coordinates | scaffoldC01:39801989..39802000 |
| Microexon Cluster ID | MEP30 |
| Size | 12 |
| Phase | 1 |
| Pfam Domain Motif | SPARK |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,12,47 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | RATGTYTAYRRYCTTTGTCATATAASCCTSAARGAYTTYTCYCTYCAAGTTGGAWMWCAAGARTCTGGWTGYCTWYTDCCAAGYTTGCCTTCAGATGCAAYATTTGAY |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | TTGGAAGCCAAG |
| Microexon Amino Acid seq | VGSQE |
| Microexon-tag DNA Seq | AATGTCTTCAGCGTTTGTCATATAAGTCTCAAAGACTTCTCTCTTCAAGTTGGAAGCCAAGAATCAGGTTGTCTATTACCAAGCTTACCATCAGATGCAATATTCGAT |
| Microexon-tag Amino Acid Seq | NVFSVCHISLKDFSLQVGSQESGCLLPSLPSDAIFD |
| Microexon-tag spanning region | 39801845-39802162 |
| Microexon-tag prediction score | 0.9634 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | BnaC01T0347400ZSx |
| Reference Transcript ID | BnaC01T0347400ZS |
| Gene ID | BnaC01G0347400ZS |
| Gene Name | NA |
| Transcript ID | BnaC01T0347400ZS |
| Protein ID | |
| Gene ID | BnaC01G0347400ZS |
| Gene Name | |
| Pfam domain motif | Unknown |
| Motif E-value | NA |
| Motif start | NA |
| Motif end | NA |
| Protein seq | >BnaC01T0347400ZS MTRRAEFEMGLFVVLQFMFMLSLCSSDEELLPEISSPDTSPQPFRPFIAPSPMVPFINTTIPKLSGLCSLNFTASEGLIQ TTSHNCWTVFAPLLANVMCCPQLDATLTITLGKASKETGLLALNRTQSKHCVSDLEKILVGKGASSRLRSICSLYSSNLT ASSCPVINVDEFESAVDTSKLLLACEKVDPVKECCEQACQNAILDAATNVTLKASEPLTDNSVRINDCKNVVHRWLASKL EPSQAKETLRGLANCKINRVCPLVFPGMREISGNCSSELSNQMGCCGAMESYVSHLQKQALITNLQALDCATSLGTKLQK LNITKNVFSVCHISLKDFSLQVGSQESGCLLPSLPSDAIFDQDTGISFTCDLNDNIPAPWPSSSSSSDSTCKKPVTIPAL PAAASSQPGLYSEGVTRLVIFVLSLLLVMLLS* |
| CDS seq | >BnaC01T0347400ZS ATGACGAGAAGAGCAGAATTTGAGATGGGTCTCTTCGTGGTTCTTCAATTCATGTTTATGCTATCTCTATGTTCATCTGA TGAGGAGTTGTTACCAGAGATATCATCACCAGATACTTCTCCTCAACCATTTCGTCCCTTCATTGCACCTTCTCCTATGG TTCCATTCATCAACACCACCATTCCCAAACTATCCGGGCTTTGCTCGCTTAATTTCACTGCTTCTGAAGGTTTGATTCAG ACTACTTCACACAACTGTTGGACTGTCTTTGCTCCACTGTTAGCCAATGTCATGTGCTGTCCTCAGCTAGATGCTACTCT CACCATAACCCTCGGCAAAGCCAGCAAAGAAACTGGCCTGCTTGCTTTAAACAGAACCCAGTCTAAGCACTGTGTCTCGG ACTTAGAGAAAATCTTGGTAGGCAAAGGCGCTTCGAGTCGGCTTAGGAGTATATGTTCACTTTACTCGTCGAACCTCACT GCTTCTTCGTGCCCTGTGATCAACGTCGACGAGTTTGAAAGCGCGGTGGATACATCAAAGCTTCTTTTGGCTTGTGAGAA AGTTGATCCTGTGAAGGAGTGTTGCGAACAGGCTTGCCAAAACGCCATACTCGACGCAGCTACTAATGTAACTCTGAAAG CATCAGAGCCTTTGACCGATAACTCGGTTAGGATCAATGACTGCAAGAACGTAGTGCACCGCTGGCTAGCTTCTAAGCTT GAACCTTCTCAAGCTAAGGAAACTCTCAGAGGATTAGCAAACTGCAAAATCAATAGAGTCTGTCCTCTTGTCTTTCCGGG CATGAGAGAGATAAGTGGTAACTGCAGCAGCGAACTGAGTAACCAAATGGGTTGTTGTGGTGCAATGGAGAGTTACGTGT CTCATCTACAAAAGCAAGCACTTATAACTAATTTGCAAGCTTTGGACTGCGCGACCTCTCTGGGGACAAAGCTACAGAAG CTAAACATCACTAAGAATGTCTTCAGCGTTTGTCATATAAGTCTCAAAGACTTCTCTCTTCAAGTTGGAAGCCAAGAATC AGGTTGTCTATTACCAAGCTTACCATCAGATGCAATATTCGATCAAGACACGGGAATAAGCTTCACTTGTGATCTCAATG ACAACATTCCTGCCCCATGGCCTTCTTCTTCATCTTCATCAGACTCTACCTGTAAAAAACCTGTTACAATCCCTGCTCTT CCTGCTGCCGCCTCCTCGCAACCTGGTCTCTACAGTGAAGGGGTAACACGTTTGGTGATCTTTGTACTGTCTCTGCTTCT TGTGATGCTGCTGTCGTGA |
Bn_scaffoldC01:39801989-39802000:- does not have available information here.