Microexon ID At_1:22883059-22883070:-
Species Arabidopsis thaliana
Coordinates 1:22883059..22883070
Microexon Cluster ID MEP30
Size 12
Phase 1
Pfam Domain Motif SPARK
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,12,47
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq RATGTYTAYRRYCTTTGTCATATAASCCTSAARGAYTTYTCYCTYCAAGTTGGAWMWCAAGARTCTGGWTGYCTWYTDCCAAGYTTGCCTTCAGATGCAAYATTTGAY
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TTGGAAACCAAG
Microexon Amino Acid seq VGNQE
Microexon-tag DNA Seq AACATATTCAGTGTTTGTCATATAAGTCTCAAGGACTTCTCTCTTCAAGTTGGAAACCAAGAATCTGGTTGTCTATTACCGAGCCTACCATCGGATGCGATATTTGAT
Microexon-tag Amino Acid Seq NIFSVCHISLKDFSLQVGNQESGCLLPSLPSDAIFD
Microexon-tag spanning region22882912-22883230
Microexon-tag prediction score0.9553
Overlapped with the annotated transcript (%) 100
New Transcript ID AT1G61900.1x
Reference Transcript ID AT1G61900.1
Gene ID AT1G61900
Gene Name NA
Transcript ID AT1G61900.1
Protein ID AT1G61900.1
Gene ID AT1G61900
Gene Name NA
Pfam domain motif SPARK
Motif E-value 0.24
Motif start 261
Motif end 350
Protein seq >AT1G61900.1
MTRRAEFEMGLFVILQSMFLISLCSSQKPEEFLPEISPDTSPQPFLPFIAPSPMVPYINSTMPKLSGLCSLNFSASESLI
QTTSHNCWTVFAPLLANVMCCPQLDATLTIILGKASKETGLLALNRTQSKHCLSDLEQILVGKGASGQLNKICSIHSSNL
TSSSCPVINVDEFESTVDTAKLLLACEKIDPVKECCEEACQNAILDAATNISLKASETLTDNSDRINDCKNVVNRWLATK
LDPSRVKETLRGLANCKINRVCPLVFPHMKHIGGNCSNELSNQTGCCRAMESYVSHLQKQTLITNLQALDCATSLGTKLQ
KLNITKNIFSVCHISLKDFSLQVGNQESGCLLPSLPSDAIFDKDTGISFTCDLNDNIPAPWPSSSLSSASTCKKPVRIPA
LPAAASSQPRLHDEGVTRLVIFVLSMLLVMLLS*
CDS seq >AT1G61900.1
ATGACGAGAAGAGCTGAATTTGAGATGGGTTTGTTCGTGATTCTTCAATCCATGTTTCTGATATCTCTATGTTCATCACA
GAAACCTGAGGAGTTCTTACCTGAGATATCACCAGATACTTCTCCTCAACCGTTTCTTCCTTTCATTGCACCTTCTCCAA
TGGTTCCATACATAAATAGTACCATGCCTAAACTATCAGGGCTTTGCTCGCTTAATTTCAGTGCGTCTGAGAGTTTGATT
CAGACTACTTCACACAACTGTTGGACTGTTTTTGCTCCATTGTTGGCAAATGTGATGTGTTGTCCTCAGCTAGATGCTAC
ACTCACAATAATCCTTGGTAAAGCGAGTAAAGAAACCGGTTTGCTTGCTTTAAACAGAACCCAGTCTAAGCACTGTCTCT
CGGATTTAGAGCAAATCTTGGTAGGAAAAGGCGCTTCAGGTCAGCTTAATAAGATCTGTTCTATTCACTCGTCGAATCTC
ACTTCTTCGTCGTGCCCTGTTATCAATGTCGATGAGTTTGAAAGCACGGTGGATACAGCGAAACTTCTTTTGGCCTGTGA
AAAAATTGATCCTGTGAAGGAATGTTGCGAAGAGGCTTGCCAAAATGCGATACTCGATGCTGCTACGAATATATCTCTTA
AAGCATCAGAAACTTTAACTGATAATTCGGATAGGATCAATGACTGCAAGAACGTAGTAAACCGCTGGCTCGCTACTAAA
CTTGACCCTTCTCGGGTTAAGGAAACTCTCAGAGGATTAGCAAACTGCAAAATCAATAGAGTTTGTCCTCTTGTCTTTCC
GCACATGAAGCATATTGGTGGTAACTGCAGCAACGAGTTGAGTAACCAAACGGGTTGTTGCCGTGCAATGGAGAGTTATG
TGTCTCACTTGCAAAAGCAAACACTTATAACCAATTTGCAAGCTTTAGATTGCGCAACCAGCCTTGGGACAAAGTTACAG
AAACTGAACATCACTAAGAACATATTCAGTGTTTGTCATATAAGTCTCAAGGACTTCTCTCTTCAAGTTGGAAACCAAGA
ATCTGGTTGTCTATTACCGAGCCTACCATCGGATGCGATATTTGATAAAGACACGGGGATAAGCTTTACTTGTGACCTCA
ATGACAACATTCCCGCTCCGTGGCCTTCATCTTCTCTATCCTCAGCCTCTACCTGTAAAAAACCTGTTAGAATTCCTGCT
CTTCCAGCTGCTGCCTCCTCGCAACCTCGTCTCCACGATGAAGGAGTGACACGTTTGGTGATCTTTGTCTTGTCTATGCT
TCTTGTGATGCTTCTGTCATAG
Microexon DNA seq TTGGAAACCAAG
Microexon Amino Acid seq VGNQE
Microexon-tag DNA Seq AACATATTCAGTGTTTGTCATATAAGTCTCAAGGACTTCTCTCTTCAAGTTGGAAACCAAGAATCTGGTTGTCTATTACCGAGCCTACCATCGGATGCGATATTTGAT
Microexon-tag Amino Acid seq NIFSVCHISLKDFSLQVGNQESGCLLPSLPSDAIFD
Transcript ID AT1G61900.1
Gene ID At.5295
Gene Name NA
Pfam domain motif SPARK
Motif E-value 0.24
Motif start 261
Motif end 350
Protein seq >AT1G61900.1
MTRRAEFEMGLFVILQSMFLISLCSSQKPEEFLPEISPDTSPQPFLPFIAPSPMVPYINSTMPKLSGLCSLNFSASESLI
QTTSHNCWTVFAPLLANVMCCPQLDATLTIILGKASKETGLLALNRTQSKHCLSDLEQILVGKGASGQLNKICSIHSSNL
TSSSCPVINVDEFESTVDTAKLLLACEKIDPVKECCEEACQNAILDAATNISLKASETLTDNSDRINDCKNVVNRWLATK
LDPSRVKETLRGLANCKINRVCPLVFPHMKHIGGNCSNELSNQTGCCRAMESYVSHLQKQTLITNLQALDCATSLGTKLQ
KLNITKNIFSVCHISLKDFSLQVGNQESGCLLPSLPSDAIFDKDTGISFTCDLNDNIPAPWPSSSLSSASTCKKPVRIPA
LPAAASSQPRLHDEGVTRLVIFVLSMLLVMLLS*
CDS seq >AT1G61900.1
ATGACGAGAAGAGCTGAATTTGAGATGGGTTTGTTCGTGATTCTTCAATCCATGTTTCTGATATCTCTATGTTCATCACA
GAAACCTGAGGAGTTCTTACCTGAGATATCACCAGATACTTCTCCTCAACCGTTTCTTCCTTTCATTGCACCTTCTCCAA
TGGTTCCATACATAAATAGTACCATGCCTAAACTATCAGGGCTTTGCTCGCTTAATTTCAGTGCGTCTGAGAGTTTGATT
CAGACTACTTCACACAACTGTTGGACTGTTTTTGCTCCATTGTTGGCAAATGTGATGTGTTGTCCTCAGCTAGATGCTAC
ACTCACAATAATCCTTGGTAAAGCGAGTAAAGAAACCGGTTTGCTTGCTTTAAACAGAACCCAGTCTAAGCACTGTCTCT
CGGATTTAGAGCAAATCTTGGTAGGAAAAGGCGCTTCAGGTCAGCTTAATAAGATCTGTTCTATTCACTCGTCGAATCTC
ACTTCTTCGTCGTGCCCTGTTATCAATGTCGATGAGTTTGAAAGCACGGTGGATACAGCGAAACTTCTTTTGGCCTGTGA
AAAAATTGATCCTGTGAAGGAATGTTGCGAAGAGGCTTGCCAAAATGCGATACTCGATGCTGCTACGAATATATCTCTTA
AAGCATCAGAAACTTTAACTGATAATTCGGATAGGATCAATGACTGCAAGAACGTAGTAAACCGCTGGCTCGCTACTAAA
CTTGACCCTTCTCGGGTTAAGGAAACTCTCAGAGGATTAGCAAACTGCAAAATCAATAGAGTTTGTCCTCTTGTCTTTCC
GCACATGAAGCATATTGGTGGTAACTGCAGCAACGAGTTGAGTAACCAAACGGGTTGTTGCCGTGCAATGGAGAGTTATG
TGTCTCACTTGCAAAAGCAAACACTTATAACCAATTTGCAAGCTTTAGATTGCGCAACCAGCCTTGGGACAAAGTTACAG
AAACTGAACATCACTAAGAACATATTCAGTGTTTGTCATATAAGTCTCAAGGACTTCTCTCTTCAAGTTGGAAACCAAGA
ATCTGGTTGTCTATTACCGAGCCTACCATCGGATGCGATATTTGATAAAGACACGGGGATAAGCTTTACTTGTGACCTCA
ATGACAACATTCCCGCTCCGTGGCCTTCATCTTCTCTATCCTCAGCCTCTACCTGTAAAAAACCTGTTAGAATTCCTGCT
CTTCCAGCTGCTGCCTCCTCGCAACCTCGTCTCCACGATGAAGGAGTGACACGTTTGGTGATCTTTGTCTTGTCTATGCT
TCTTGTGATGCTTCTGTCATAG