
Microexon ID | At_1:22883059-22883070:- |
Species | Arabidopsis thaliana | Coordinates | 1:22883059..22883070 |
Microexon Cluster ID | MEP30 |
Size | 12 |
Phase | 1 |
Pfam Domain Motif | SPARK |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,12,47 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | RATGTYTAYRRYCTTTGTCATATAASCCTSAARGAYTTYTCYCTYCAAGTTGGAWMWCAAGARTCTGGWTGYCTWYTDCCAAGYTTGCCTTCAGATGCAAYATTTGAY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTGGAAACCAAG |
Microexon Amino Acid seq | VGNQE |
Microexon-tag DNA Seq | AACATATTCAGTGTTTGTCATATAAGTCTCAAGGACTTCTCTCTTCAAGTTGGAAACCAAGAATCTGGTTGTCTATTACCGAGCCTACCATCGGATGCGATATTTGAT |
Microexon-tag Amino Acid Seq | NIFSVCHISLKDFSLQVGNQESGCLLPSLPSDAIFD |
Microexon-tag spanning region | 22882912-22883230 |
Microexon-tag prediction score | 0.9553 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | AT1G61900.1x |
Reference Transcript ID | AT1G61900.1 |
Gene ID | AT1G61900 |
Gene Name | NA |
Transcript ID | AT1G61900.1 |
Protein ID | AT1G61900.1 |
Gene ID | AT1G61900 |
Gene Name | NA |
Pfam domain motif | SPARK |
Motif E-value | 0.24 |
Motif start | 261 |
Motif end | 350 |
Protein seq | >AT1G61900.1 MTRRAEFEMGLFVILQSMFLISLCSSQKPEEFLPEISPDTSPQPFLPFIAPSPMVPYINSTMPKLSGLCSLNFSASESLI QTTSHNCWTVFAPLLANVMCCPQLDATLTIILGKASKETGLLALNRTQSKHCLSDLEQILVGKGASGQLNKICSIHSSNL TSSSCPVINVDEFESTVDTAKLLLACEKIDPVKECCEEACQNAILDAATNISLKASETLTDNSDRINDCKNVVNRWLATK LDPSRVKETLRGLANCKINRVCPLVFPHMKHIGGNCSNELSNQTGCCRAMESYVSHLQKQTLITNLQALDCATSLGTKLQ KLNITKNIFSVCHISLKDFSLQVGNQESGCLLPSLPSDAIFDKDTGISFTCDLNDNIPAPWPSSSLSSASTCKKPVRIPA LPAAASSQPRLHDEGVTRLVIFVLSMLLVMLLS* |
CDS seq | >AT1G61900.1 ATGACGAGAAGAGCTGAATTTGAGATGGGTTTGTTCGTGATTCTTCAATCCATGTTTCTGATATCTCTATGTTCATCACA GAAACCTGAGGAGTTCTTACCTGAGATATCACCAGATACTTCTCCTCAACCGTTTCTTCCTTTCATTGCACCTTCTCCAA TGGTTCCATACATAAATAGTACCATGCCTAAACTATCAGGGCTTTGCTCGCTTAATTTCAGTGCGTCTGAGAGTTTGATT CAGACTACTTCACACAACTGTTGGACTGTTTTTGCTCCATTGTTGGCAAATGTGATGTGTTGTCCTCAGCTAGATGCTAC ACTCACAATAATCCTTGGTAAAGCGAGTAAAGAAACCGGTTTGCTTGCTTTAAACAGAACCCAGTCTAAGCACTGTCTCT CGGATTTAGAGCAAATCTTGGTAGGAAAAGGCGCTTCAGGTCAGCTTAATAAGATCTGTTCTATTCACTCGTCGAATCTC ACTTCTTCGTCGTGCCCTGTTATCAATGTCGATGAGTTTGAAAGCACGGTGGATACAGCGAAACTTCTTTTGGCCTGTGA AAAAATTGATCCTGTGAAGGAATGTTGCGAAGAGGCTTGCCAAAATGCGATACTCGATGCTGCTACGAATATATCTCTTA AAGCATCAGAAACTTTAACTGATAATTCGGATAGGATCAATGACTGCAAGAACGTAGTAAACCGCTGGCTCGCTACTAAA CTTGACCCTTCTCGGGTTAAGGAAACTCTCAGAGGATTAGCAAACTGCAAAATCAATAGAGTTTGTCCTCTTGTCTTTCC GCACATGAAGCATATTGGTGGTAACTGCAGCAACGAGTTGAGTAACCAAACGGGTTGTTGCCGTGCAATGGAGAGTTATG TGTCTCACTTGCAAAAGCAAACACTTATAACCAATTTGCAAGCTTTAGATTGCGCAACCAGCCTTGGGACAAAGTTACAG AAACTGAACATCACTAAGAACATATTCAGTGTTTGTCATATAAGTCTCAAGGACTTCTCTCTTCAAGTTGGAAACCAAGA ATCTGGTTGTCTATTACCGAGCCTACCATCGGATGCGATATTTGATAAAGACACGGGGATAAGCTTTACTTGTGACCTCA ATGACAACATTCCCGCTCCGTGGCCTTCATCTTCTCTATCCTCAGCCTCTACCTGTAAAAAACCTGTTAGAATTCCTGCT CTTCCAGCTGCTGCCTCCTCGCAACCTCGTCTCCACGATGAAGGAGTGACACGTTTGGTGATCTTTGTCTTGTCTATGCT TCTTGTGATGCTTCTGTCATAG |
Microexon DNA seq | TTGGAAACCAAG |
Microexon Amino Acid seq | VGNQE |
Microexon-tag DNA Seq | AACATATTCAGTGTTTGTCATATAAGTCTCAAGGACTTCTCTCTTCAAGTTGGAAACCAAGAATCTGGTTGTCTATTACCGAGCCTACCATCGGATGCGATATTTGAT |
Microexon-tag Amino Acid seq | NIFSVCHISLKDFSLQVGNQESGCLLPSLPSDAIFD |
Transcript ID | AT1G61900.1 |
Gene ID | At.5295 |
Gene Name | NA |
Pfam domain motif | SPARK |
Motif E-value | 0.24 |
Motif start | 261 |
Motif end | 350 |
Protein seq | >AT1G61900.1 MTRRAEFEMGLFVILQSMFLISLCSSQKPEEFLPEISPDTSPQPFLPFIAPSPMVPYINSTMPKLSGLCSLNFSASESLI QTTSHNCWTVFAPLLANVMCCPQLDATLTIILGKASKETGLLALNRTQSKHCLSDLEQILVGKGASGQLNKICSIHSSNL TSSSCPVINVDEFESTVDTAKLLLACEKIDPVKECCEEACQNAILDAATNISLKASETLTDNSDRINDCKNVVNRWLATK LDPSRVKETLRGLANCKINRVCPLVFPHMKHIGGNCSNELSNQTGCCRAMESYVSHLQKQTLITNLQALDCATSLGTKLQ KLNITKNIFSVCHISLKDFSLQVGNQESGCLLPSLPSDAIFDKDTGISFTCDLNDNIPAPWPSSSLSSASTCKKPVRIPA LPAAASSQPRLHDEGVTRLVIFVLSMLLVMLLS* |
CDS seq | >AT1G61900.1 ATGACGAGAAGAGCTGAATTTGAGATGGGTTTGTTCGTGATTCTTCAATCCATGTTTCTGATATCTCTATGTTCATCACA GAAACCTGAGGAGTTCTTACCTGAGATATCACCAGATACTTCTCCTCAACCGTTTCTTCCTTTCATTGCACCTTCTCCAA TGGTTCCATACATAAATAGTACCATGCCTAAACTATCAGGGCTTTGCTCGCTTAATTTCAGTGCGTCTGAGAGTTTGATT CAGACTACTTCACACAACTGTTGGACTGTTTTTGCTCCATTGTTGGCAAATGTGATGTGTTGTCCTCAGCTAGATGCTAC ACTCACAATAATCCTTGGTAAAGCGAGTAAAGAAACCGGTTTGCTTGCTTTAAACAGAACCCAGTCTAAGCACTGTCTCT CGGATTTAGAGCAAATCTTGGTAGGAAAAGGCGCTTCAGGTCAGCTTAATAAGATCTGTTCTATTCACTCGTCGAATCTC ACTTCTTCGTCGTGCCCTGTTATCAATGTCGATGAGTTTGAAAGCACGGTGGATACAGCGAAACTTCTTTTGGCCTGTGA AAAAATTGATCCTGTGAAGGAATGTTGCGAAGAGGCTTGCCAAAATGCGATACTCGATGCTGCTACGAATATATCTCTTA AAGCATCAGAAACTTTAACTGATAATTCGGATAGGATCAATGACTGCAAGAACGTAGTAAACCGCTGGCTCGCTACTAAA CTTGACCCTTCTCGGGTTAAGGAAACTCTCAGAGGATTAGCAAACTGCAAAATCAATAGAGTTTGTCCTCTTGTCTTTCC GCACATGAAGCATATTGGTGGTAACTGCAGCAACGAGTTGAGTAACCAAACGGGTTGTTGCCGTGCAATGGAGAGTTATG TGTCTCACTTGCAAAAGCAAACACTTATAACCAATTTGCAAGCTTTAGATTGCGCAACCAGCCTTGGGACAAAGTTACAG AAACTGAACATCACTAAGAACATATTCAGTGTTTGTCATATAAGTCTCAAGGACTTCTCTCTTCAAGTTGGAAACCAAGA ATCTGGTTGTCTATTACCGAGCCTACCATCGGATGCGATATTTGATAAAGACACGGGGATAAGCTTTACTTGTGACCTCA ATGACAACATTCCCGCTCCGTGGCCTTCATCTTCTCTATCCTCAGCCTCTACCTGTAAAAAACCTGTTAGAATTCCTGCT CTTCCAGCTGCTGCCTCCTCGCAACCTCGTCTCCACGATGAAGGAGTGACACGTTTGGTGATCTTTGTCTTGTCTATGCT TCTTGTGATGCTTCTGTCATAG |