
Microexon ID | Ta_4B:498384361-498384372:+ |
Species | Triticum Aestivum | Coordinates | 4B:498384361..498384372 |
Microexon Cluster ID | MEP29 |
Size | 12 |
Phase | 0 |
Pfam Domain Motif | TPR_12 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,12,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TTYTATCTTRTSCARMRSAARYTKGAWSAAGCYCRKRCWTGYTATGAGCGTGCTYTRAAGATAAARRGRCGTGTTYTGGGRSWTRRYCAYSCAGAYTATGCARAKACA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | CGTGCTTTGAAG |
Microexon Amino Acid seq | RALK |
Microexon-tag DNA Seq | CACTATCATATTCAGAACAGGTTTGATCAAGCTCAGACATGTTATGAGCGTGCTTTGAAGATACAAGGAAGTGTTGTGGGGCCTGGTCACCCAGATTATGCAAATACA |
Microexon-tag Amino Acid Seq | HYHIQNRFDQAQTCYERALKIQGSVVGPGHPDYANT |
Microexon-tag spanning region | 498383487-498385054 |
Microexon-tag prediction score | 0.9429 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS4B02G240300.2x |
Reference Transcript ID | TraesCS4B02G240300.2 |
Gene ID | TraesCS4B02G240300 |
Gene Name | NA |
Transcript ID | TraesCS4B02G240300.2 |
Protein ID | |
Gene ID | TraesCS4B02G240300 |
Gene Name | |
Pfam domain motif | TPR_12 |
Motif E-value | 8.70E-18 |
Motif start | 213 |
Motif end | 287 |
Protein seq | >TraesCS4B02G240300.2 MSSRLRLLSLLRSGRLALAPAPADRLAGAPPSRGLRLPAAAAAAASSSGSESNDGNFSYFSNRRLGFKFGAILIGQAAFF LSLSDGSVLAQDDSVAPAATMSKQADAIVTGLRRIEDGSVISNEHTIKWRIFTDKAKAFFIKGKLDEAERFFKAALHQAK EGFGLRDPHAASALKNLAEFYVLRKEFEKAEPLFLEAIEILEQSFGPDDIRVGRALRNLGQHYHIQNRFDQAQTCYERAL KIQGSVVGPGHPDYANTMYLLARVLSQQRKRKDAEALFRESIRILEEAGLGESPACLQRMMFHSTELMNLKQLDEAENLR RKILRIMELSKGWDSLGTTAAAVQLSVTLVTLGKLRESEELLQRCLAVRKRILSEDHIQVASILVHLARLSLLRIISDIK VNNDLCRSHLVRGKRLVNDSIRIAEKILNPLREDQKKPKNAFPIELERIAATGILLEALEIVGLLDSGRMAIQAWAPANS VLLLRLPREHMKHGYFKIDVVRIPDKCWLFIWPAKYRISLRYTTLRIHFNKFEKFDYEHFEQALRRWVSLYNEPRTRNIV SNALRPHYMKCWRTLVGAARHAPFMDAPHLQDLLAESQQIMKELGGENNMMTGSVDFGDSEE* |
CDS seq | >TraesCS4B02G240300.2 ATGTCCTCGCGGCTGCGGCTGCTCTCGCTCCTGCGGAGCGGCCGCCTCGCCCTCGCCCCCGCCCCGGCAGATCGCCTCGC CGGCGCGCCGCCTTCAAGGGGCCTCCGCCTACCCGCTGCGGCGGCCGCTGCTGCCTCCTCCTCAGGTTCTGAATCTAATG ATGGTAACTTCAGTTACTTTTCCAATCGACGGCTGGGTTTCAAGTTTGGCGCTATACTGATTGGACAAGCAGCTTTTTTT CTTAGCCTGAGCGACGGCTCTGTATTGGCTCAGGATGACTCAGTTGCTCCAGCAGCTACAATGAGTAAGCAAGCTGATGC TATTGTTACTGGTCTACGTCGGATTGAAGATGGTTCAGTGATCTCAAATGAACACACGATCAAATGGAGAATCTTCACGG ATAAAGCAAAAGCTTTTTTCATAAAAGGAAAACTAGATGAAGCTGAAAGGTTCTTCAAGGCAGCCCTACATCAAGCTAAA GAAGGATTTGGACTGAGAGATCCACATGCTGCATCGGCACTAAAAAACTTGGCGGAGTTTTATGTGTTAAGAAAAGAGTT TGAGAAAGCTGAACCGTTATTTCTGGAAGCAATTGAAATCTTGGAGCAATCATTTGGACCTGATGATATACGGGTTGGAA GAGCTTTGCGTAATCTTGGACAACACTATCATATTCAGAACAGGTTTGATCAAGCTCAGACATGTTATGAGCGTGCTTTG AAGATACAAGGAAGTGTTGTGGGGCCTGGTCACCCAGATTATGCAAATACAATGTACCTTCTAGCCAGGGTGCTAAGTCA ACAAAGAAAAAGAAAAGATGCAGAAGCTCTTTTCCGAGAATCCATTAGGATACTTGAGGAAGCTGGACTTGGCGAATCCC CTGCTTGCTTACAAAGAATGATGTTTCACTCTACGGAGCTGATGAATCTGAAACAACTGGATGAAGCTGAAAATTTGCGA AGGAAGATATTACGTATTATGGAGCTTTCGAAGGGATGGGATTCGTTGGGTACTACAGCCGCAGCCGTACAATTAAGTGT CACTCTTGTAACCCTAGGGAAGCTGAGGGAATCAGAAGAATTATTGCAAAGATGCCTTGCAGTCAGAAAAAGGATTCTAT CTGAAGACCATATTCAGGTAGCAAGTATATTGGTACACTTGGCAAGGCTAAGTTTGCTTAGAATTATTAGTGATATCAAA GTGAACAATGACCTATGTAGATCTCACCTTGTGAGGGGAAAAAGACTTGTCAATGATTCGATAAGGATAGCGGAAAAAAT ACTGAATCCTTTGAGGGAAGATCAGAAAAAACCGAAGAATGCCTTTCCTATCGAATTGGAGCGGATTGCGGCAACAGGAA TACTTTTGGAAGCACTTGAAATTGTTGGACTTCTTGACTCTGGAAGAATGGCAATACAAGCATGGGCACCAGCGAACTCG GTACTCTTGCTAAGGCTTCCTCGGGAACATATGAAGCATGGATACTTCAAGATTGATGTTGTGCGCATACCAGACAAATG CTGGCTATTCATATGGCCAGCAAAATATCGCATAAGTCTTCGATATACCACGTTACGAATCCATTTTAATAAATTTGAGA AGTTTGATTATGAACATTTTGAACAAGCTCTGCGCAGGTGGGTTTCACTTTACAATGAGCCTCGTACACGAAACATAGTG TCCAACGCCCTCAGGCCGCACTACATGAAATGCTGGAGGACCCTCGTCGGTGCTGCTCGGCACGCTCCTTTCATGGATGC ACCACATTTGCAAGATTTGCTGGCTGAGTCGCAGCAAATAATGAAGGAATTGGGAGGAGAGAACAATATGATGACGGGCA GTGTGGATTTTGGTGATTCAGAGGAATAA |
Ta_4B:498384361-498384372:+ does not have available information here.