| Microexon ID | Pt_4:7075482-7075493:- |
| Species | Populus Trichocarpa | Coordinates | 4:7075482..7075493 |
| Microexon Cluster ID | MEP29 |
| Size | 12 |
| Phase | 0 |
| Pfam Domain Motif | TPR_12 |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,12,48 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | TTYTATCTTRTSCARMRSAARYTKGAWSAAGCYCRKRCWTGYTATGAGCGTGCTYTRAAGATAAARRGRCGTGTTYTGGGRSWTRRYCAYSCAGAYTATGCARAKACA |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | CGTGCTGTGAAG |
| Microexon Amino Acid seq | RAVK |
| Microexon-tag DNA Seq | TTTTATCTCATGCAGCGGAAACTGGATGAAGCTGACAAGTGCTACGAGCGTGCTGTGAAGATAAAAAGGCGTGTTTTAGGACTCAACCATACAGACTATGCAGATACA |
| Microexon-tag Amino Acid Seq | FYLMQRKLDEADKCYERAVKIKRRVLGLNHTDYADT |
| Microexon-tag spanning region | 7075266-7076777 |
| Microexon-tag prediction score | 0.9457 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | Potri.004G085200.1.v4.1x |
| Reference Transcript ID | Potri.004G085200.1.v4.1 |
| Gene ID | Potri.004G085200.v4.1 |
| Gene Name | NA |
| Transcript ID | Potri.004G085200.1.v4.1 |
| Protein ID | |
| Gene ID | Potri.004G085200.v4.1 |
| Gene Name | |
| Pfam domain motif | TPR_12 |
| Motif E-value | 6.10E-16 |
| Motif start | 205 |
| Motif end | 279 |
| Protein seq | >Potri.004G085200.1.v4.1 MHMRQLAAKFLRRTHFPPQRFSSSSEITTSNALPNSLSSKTKCSYKYGFGGPSWRMNSRDCYLWTILAGQAAIILGINAN PVLADEPRESSSQNDLDTDSMFGFRKIEDGSVISNEHTAKWRLFSDKGREVFLQGKLDQAEKFFFSALQEAKEGFGEKDP HVASSCNNLAELFRVQKQFDKAEPLYWEAIKILEESFGPEDIRVGAALHNLGQFYLMQRKLDEADKCYERAVKIKRRVLG LNHTDYADTLYHLGMVLYLLGKEKDAEALIQESIKILEENGMGDSITCIRRLQFLSQMYLKSNRLAEAEDVQRKVLQIME LSKGWNSMDTVIVAERLALILQSIEKIKEAKELLERCLEARKSLLPEDHIQIAANLLHIARVAMLNSNRLRKINISEAIA ELDKAKDLLHSSTRIARHVLNKLRIQKGKKQKNGASEMKREGHAALVILLQSLDTLGLVETTKQELLESQGEHLPNVEAE NVLLQCISSYKEFEAEKLISDSPKVKTEYLSCMKHLLSLMIDTGNKDKVTLKDLDDEIKRVEAEIYDRSKHKP* |
| CDS seq | >Potri.004G085200.1.v4.1 ATGCATATGAGACAACTGGCAGCTAAGTTTCTGAGGAGAACCCATTTTCCTCCTCAGAGATTCTCTTCTTCTAGTGAAAT TACAACAAGCAATGCCTTGCCCAATTCACTCTCCAGTAAAACAAAATGTTCCTACAAATATGGTTTTGGAGGGCCTAGTT GGAGGATGAACTCTAGGGATTGTTATCTATGGACTATTCTTGCTGGACAAGCTGCAATAATTCTTGGGATAAACGCCAAC CCTGTCTTAGCAGACGAGCCTCGCGAAAGCAGTTCACAAAATGATTTAGATACAGATAGCATGTTTGGGTTTCGCAAAAT TGAGGATGGTTCTGTAATATCCAATGAACATACAGCAAAATGGAGGCTTTTTTCTGATAAAGGGAGGGAAGTCTTCCTGC AGGGGAAATTGGATCAAGCTGAAAAGTTCTTCTTTTCTGCTCTACAAGAAGCAAAAGAGGGTTTCGGGGAGAAGGATCCT CATGTTGCCTCATCTTGCAACAACTTGGCAGAGCTATTTAGAGTTCAGAAGCAATTTGATAAAGCAGAACCTTTGTATTG GGAGGCCATCAAAATTCTAGAGGAATCATTTGGGCCAGAAGACATCCGTGTGGGTGCTGCGCTTCACAACCTTGGGCAGT TTTATCTCATGCAGCGGAAACTGGATGAAGCTGACAAGTGCTACGAGCGTGCTGTGAAGATAAAAAGGCGTGTTTTAGGA CTCAACCATACAGACTATGCAGATACACTGTATCATCTCGGAATGGTGCTTTATCTCCTTGGAAAAGAGAAGGATGCTGA AGCCCTCATTCAGGAATCTATTAAGATATTAGAGGAAAATGGCATGGGGGACTCAATTACTTGCATAAGGAGATTGCAAT TTCTCTCTCAGATGTATCTAAAATCCAATCGTCTTGCTGAAGCCGAGGATGTACAAAGGAAGGTGCTGCAGATTATGGAA CTATCAAAGGGATGGAATTCCATGGACACAGTAATAGTAGCTGAAAGGCTGGCCCTAATCCTACAGTCAATTGAGAAGAT AAAAGAAGCAAAAGAACTACTTGAAAGGTGTCTTGAGGCTCGGAAGTCCTTGCTTCCCGAAGATCACATTCAGATTGCTG CAAATCTGCTTCATATTGCAAGGGTTGCAATGTTGAATTCAAATCGGCTGAGAAAGATAAATATTTCTGAAGCAATTGCT GAGCTTGACAAGGCAAAAGATCTTTTGCACAGTTCTACAAGGATAGCACGCCATGTCTTAAATAAATTGAGAATACAAAA AGGGAAAAAGCAGAAGAATGGAGCATCTGAAATGAAAAGAGAGGGGCATGCGGCATTGGTCATACTGTTGCAATCACTGG ATACTCTTGGACTTGTGGAGACTACAAAACAAGAGTTACTGGAGTCACAGGGAGAGCATTTACCCAACGTTGAAGCCGAA AATGTCCTTTTGCAATGCATTTCTTCTTACAAAGAGTTTGAAGCTGAGAAGTTAATTTCTGATTCCCCTAAAGTAAAGAC CGAGTATCTTTCATGTATGAAGCATCTTTTGAGCTTGATGATCGATACTGGTAACAAAGATAAGGTCACCTTAAAGGATT TGGATGATGAAATCAAGCGTGTTGAAGCTGAGATTTATGATCGCTCAAAACATAAACCCTAA |
Pt_4:7075482-7075493:- does not have available information here.