
Microexon ID | Ps_NC_039362.1:122173130-122173141:- |
Species | Papaver somniferum | Coordinates | NC_039362.1:122173130..122173141 |
Microexon Cluster ID | MEP29 |
Size | 12 |
Phase | 0 |
Pfam Domain Motif | TPR_12 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,12,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TTYTATCTTRTSCARMRSAARYTKGAWSAAGCYCRKRCWTGYTATGAGCGTGCTYTRAAGATAAARRGRCGTGTTYTGGGRSWTRRYCAYSCAGAYTATGCARAKACA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | CGTGCGTTAAAG |
Microexon Amino Acid seq | RALK |
Microexon-tag DNA Seq | TTTTATATTGTGCAGAGGAAACTTGAAGAAGCCCATAACTGCTACGAGCGTGCGTTAAAGATAAAGAGGCGTGTTCTTGGACAAAACCACACAGACTATGCAAATACA |
Microexon-tag Amino Acid Seq | FYIVQRKLEEAHNCYERALKIKRRVLGQNHTDYANT |
Microexon-tag spanning region | 122172867-122173817 |
Microexon-tag prediction score | 0.9553 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026531570.1x |
Reference Transcript ID | XM_026531570.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026531570.1 |
Protein ID | XP_026387355.1 |
Gene ID | LOC113282544 |
Gene Name | NA |
Pfam domain motif | TPR_12 |
Motif E-value | 3.2e-14 |
Motif start | 205 |
Motif end | 280 |
Protein seq | >XP_026387355.1 MFLRQSGSLLRRRLRYLLSTNTITTTTKTTISSLSSYPPPSNAGFLHHNGPEIPRWQKLHWDSSLWILLSGQAAIILGAS GNLAFADDVSAEARTGAGEDGSSDLQRVEDGSVISNIHTSKWRVFTDKARDFFLEGKLVEAEKLFLSAVEEAKEGFGKSD PHVAAALNNLAELYRVKKDFAKAEPLYLEAVHILEESFGLGDIRVAASLHNLGQFYIVQRKLEEAHNCYERALKIKRRVL GQNHTDYANTMYHLGTVKYLQGKENDSVALIQDSIKILEESGLGQSVACLRRLRYLAQVFLKSNRLSEAENVQRKILHIR EMSKV* |
CDS seq | >XM_026531570.1 ATGTTTCTGCGACAATCTGGAAGTTTACTTCGAAGGAGATTAAGATACCTCCTCTCTACTAATACGATCACTACAACAAC TAAAACTACTATCAGTAGTCTCTCTTCATATCCTCCCCCAAGTAATGCGGGATTTCTCCACCACAATGGGCCTGAGATTC CAAGATGGCAGAAGCTTCACTGGGACTCTTCTTTGTGGATATTACTTTCTGGACAAGCTGCAATCATTCTTGGGGCAAGT GGAAATCTTGCATTTGCGGATGATGTTTCAGCTGAAGCGAGAACTGGTGCAGGGGAGGATGGGTCAAGTGATCTCCAGAG AGTTGAGGATGGGTCTGTGATATCAAATATCCACACATCTAAATGGCGGGTTTTTACAGATAAGGCGAGGGACTTTTTTT TGGAAGGAAAATTAGTGGAAGCTGAAAAACTATTTTTGTCAGCGGTGGAAGAAGCTAAAGAGGGTTTTGGGAAGAGCGAT CCACATGTTGCTGCTGCATTAAACAATTTGGCTGAGCTCTATAGAGTGAAGAAGGATTTCGCTAAAGCTGAGCCACTCTA TTTGGAGGCCGTCCATATTTTAGAGGAATCATTTGGACTTGGCGATATACGTGTTGCAGCCTCTCTACACAACCTTGGGC AGTTTTATATTGTGCAGAGGAAACTTGAAGAAGCCCATAACTGCTACGAGCGTGCGTTAAAGATAAAGAGGCGTGTTCTT GGACAAAACCACACAGACTATGCAAATACAATGTATCATCTGGGAACGGTGAAGTATCTTCAAGGAAAGGAGAATGATTC TGTGGCTCTAATTCAAGATTCTATTAAGATACTAGAGGAATCTGGCTTAGGACAATCAGTTGCTTGCTTGCGGAGGCTGC GGTATCTTGCTCAGGTATTTTTGAAGTCCAATCGACTTTCAGAGGCTGAGAATGTACAGAGAAAAATCTTGCACATCAGG GAGATGTCAAAGGTTTAA |
Microexon DNA seq | CGTGCGTTAAAG |
Microexon Amino Acid seq | RALK |
Microexon-tag DNA Seq | TTTTATATTGTGCAGAGGAAACTTGAAGAAGCCCATAACTGCTACGAGCGTGCGTTAAAGATAAAGAGGCGTGTTCTTGGACAAAACCACACAGACTATGCAAATACA |
Microexon-tag Amino Acid seq | FYIVQRKLEEAHNCYERALKIKRRVLGQNHTDYANT |
Transcript ID | Ps.30160.1 |
Gene ID | Ps.30160 |
Gene Name | NA |
Pfam domain motif | TPR_12 |
Motif E-value | 5.5e-14 |
Motif start | 205 |
Motif end | 279 |
Protein seq | >Ps.30160.1 MFLRQSGSLLRRRLRYLLSTNTITTTTKTTISSLSSYPPPSNAGFLHHNGPEIPRWQKLHWDSSLWILLSGQAAIILGAS GNLAFADDVSAEARTGAGEDGSSDLQRVEDGSVISNIHTSKWRVFTDKARDFFLEGKLVEAEKLFLSAVEEAKEGFGKSD PHVAAALNNLAELYRVKKDFAKAEPLYLEAVHILEESFGLGDIRVAASLHNLGQFYIVQRKLEEAHNCYERALKIKRRVL GQNHTDYANTMYHLGTVKYLQGKENDSVALIQDSIKILEVFLIIMFDINL* |
CDS seq | >Ps.30160.1 ATGTTTCTGCGACAATCTGGAAGTTTACTTCGAAGGAGATTAAGATACCTCCTCTCTACTAATACGATCACTACAACAAC TAAAACTACTATCAGTAGTCTCTCTTCATATCCTCCCCCAAGTAATGCGGGATTTCTCCACCACAATGGGCCTGAGATTC CAAGATGGCAGAAGCTTCACTGGGACTCTTCTTTGTGGATATTACTTTCTGGACAAGCTGCAATCATTCTTGGGGCAAGT GGAAATCTTGCATTTGCGGATGATGTTTCAGCTGAAGCGAGAACTGGTGCAGGGGAGGATGGGTCAAGTGATCTCCAGAG AGTTGAGGATGGGTCTGTGATATCAAATATCCACACATCTAAATGGCGGGTTTTTACAGATAAGGCGAGGGACTTTTTTT TGGAAGGAAAATTAGTGGAAGCTGAAAAACTATTTTTGTCAGCGGTGGAAGAAGCTAAAGAGGGTTTTGGGAAGAGCGAT CCACATGTTGCTGCTGCATTAAACAATTTGGCTGAGCTCTATAGAGTGAAGAAGGATTTCGCTAAAGCTGAGCCACTCTA TTTGGAGGCCGTCCATATTTTAGAGGAATCATTTGGACTTGGCGATATACGTGTTGCAGCCTCTCTACACAACCTTGGGC AGTTTTATATTGTGCAGAGGAAACTTGAAGAAGCCCATAACTGCTACGAGCGTGCGTTAAAGATAAAGAGGCGTGTTCTT GGACAAAACCACACAGACTATGCAAATACAATGTATCATCTGGGAACGGTGAAGTATCTTCAAGGAAAGGAGAATGATTC TGTGGCTCTAATTCAAGATTCTATTAAGATACTAGAGGTTTTTCTGATCATCATGTTTGATATTAATCTGTAG |