
Microexon ID | Ps_NC_039361.1:44004937-44004948:+ |
Species | Papaver somniferum | Coordinates | NC_039361.1:44004937..44004948 |
Microexon Cluster ID | MEP29 |
Size | 12 |
Phase | 0 |
Pfam Domain Motif | TPR_12 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,12,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TTYTATCTTRTSCARMRSAARYTKGAWSAAGCYCRKRCWTGYTATGAGCGTGCTYTRAAGATAAARRGRCGTGTTYTGGGRSWTRRYCAYSCAGAYTATGCARAKACA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | CGTGCGTTAAAG |
Microexon Amino Acid seq | RALK |
Microexon-tag DNA Seq | TTTTATATTGTGCAGAGGAAACTTGAAGAAGCCCATAAGTGCTACGAGCGTGCGTTAAAGATAAAGAGGCGTGTTCTTGGACAAAACCACACAGACTATGCAAATACA |
Microexon-tag Amino Acid Seq | FYIVQRKLEEAHKCYERALKIKRRVLGQNHTDYANT |
Microexon-tag spanning region | 44004209-44005211 |
Microexon-tag prediction score | 0.9561 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026524798.1x |
Reference Transcript ID | XM_026524798.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026524798.1 |
Protein ID | XP_026380583.1 |
Gene ID | LOC113275311 |
Gene Name | NA |
Pfam domain motif | TPR_12 |
Motif E-value | 1e-14 |
Motif start | 204 |
Motif end | 279 |
Protein seq | >XP_026380583.1 MFLRRSGSLLRRLRYLLSINTITTTTKTTTSSLSSYPLPSNAGFLHRNGPEIPRWQKLHWDSSLWILLSGQAAIILGASG NLAFADDVSAEARTGEGEDGSSDIQRVEDGSVISNIHTSKWRVFTDKARDFFLEGKLVEAEKLFLSAVEEAKEGFGKSDP HVAAALNNLAELYRVKKDFAKAEPLYLEAVHILEESFGLDDIRVAASLHNLGQFYIVQRKLEEAHKCYERALKIKRRVLG QNHTDYANTMYHLGTVKYLQGKENDSVALIQDSIKILEESGLGQSVACLRRLRYLAQVFLKSNRLSEAENVQRKILHIRE MSKV* |
CDS seq | >XM_026524798.1 ATGTTTCTGCGACGATCTGGAAGTTTACTAAGGAGATTAAGATACCTCCTCTCTATTAATACGATCACAACAACAACTAA AACTACTACCAGTAGTCTCTCTTCATATCCTCTCCCAAGTAATGCGGGATTTCTCCACCGCAATGGGCCTGAGATCCCAA GATGGCAGAAGCTTCACTGGGACTCTTCTTTGTGGATATTACTTTCTGGACAAGCTGCAATCATTCTTGGGGCAAGTGGA AATCTTGCATTTGCGGATGATGTTTCAGCTGAAGCGAGAACTGGTGAAGGGGAGGATGGGTCAAGTGATATCCAGAGAGT TGAGGATGGGTCTGTGATATCAAATATCCACACATCTAAATGGCGGGTTTTTACAGATAAGGCGAGGGACTTTTTTTTGG AAGGAAAATTAGTGGAAGCTGAAAAACTATTTTTGTCAGCGGTGGAGGAAGCTAAAGAGGGTTTTGGGAAGAGCGATCCA CATGTTGCTGCTGCATTAAACAATTTGGCTGAGCTCTATAGAGTGAAGAAGGATTTCGCTAAAGCTGAGCCACTCTATTT GGAGGCCGTCCATATTTTAGAGGAATCATTTGGACTTGACGATATACGTGTTGCAGCTTCTCTACACAACCTTGGGCAGT TTTATATTGTGCAGAGGAAACTTGAAGAAGCCCATAAGTGCTACGAGCGTGCGTTAAAGATAAAGAGGCGTGTTCTTGGA CAAAACCACACAGACTATGCAAATACAATGTATCATCTGGGAACGGTGAAGTATCTTCAAGGAAAGGAGAATGATTCAGT GGCTCTAATTCAAGATTCTATTAAGATACTAGAGGAATCTGGCTTAGGACAATCAGTTGCTTGCTTGCGGAGGCTGAGGT ATCTTGCTCAGGTATTTTTGAAGTCCAATAGACTTTCAGAGGCTGAGAATGTACAGCGAAAAATCTTGCACATCAGGGAG ATGTCAAAGGTTTAA |
Microexon DNA seq | CGTGCGTTAAAG |
Microexon Amino Acid seq | RALK |
Microexon-tag DNA Seq | TTTTATATTGTGCAGAGGAAACTTGAAGAAGCCCATAAGTGCTACGAGCGTGCGTTAAAGATAAAGAGGCGTGTTCTTGGACAAAACCACACAGACTATGCAAATACA |
Microexon-tag Amino Acid seq | FYIVQRKLEEAHKCYERALKIKRRVLGQNHTDYANT |
Transcript ID | Ps.23678.1 |
Gene ID | Ps.23678 |
Gene Name | NA |
Pfam domain motif | TPR_12 |
Motif E-value | 1.8e-14 |
Motif start | 204 |
Motif end | 278 |
Protein seq | >Ps.23678.1 MFLRRSGSLLRRLRYLLSINTITTTTKTTTSSLSSYPLPSNAGFLHRNGPEIPRWQKLHWDSSLWILLSGQAAIILGASG NLAFADDVSAEARTGEGEDGSSDIQRVEDGSVISNIHTSKWRVFTDKARDFFLEGKLVEAEKLFLSAVEEAKEGFGKSDP HVAAALNNLAELYRVKKDFAKAEPLYLEAVHILEESFGLDDIRVAASLHNLGQFYIVQRKLEEAHKCYERALKIKRRVLG QNHTDYANTMYHLGTVKYLQGKENDSVALIQDSIKILEVFLIIMFDVNLYSFFFLFFFSSS* |
CDS seq | >Ps.23678.1 ATGTTTCTGCGACGATCTGGAAGTTTACTAAGGAGATTAAGATACCTCCTCTCTATTAATACGATCACAACAACAACTAA AACTACTACCAGTAGTCTCTCTTCATATCCTCTCCCAAGTAATGCGGGATTTCTCCACCGCAATGGGCCTGAGATCCCAA GATGGCAGAAGCTTCACTGGGACTCTTCTTTGTGGATATTACTTTCTGGACAAGCTGCAATCATTCTTGGGGCAAGTGGA AATCTTGCATTTGCGGATGATGTTTCAGCTGAAGCGAGAACTGGTGAAGGGGAGGATGGGTCAAGTGATATCCAGAGAGT TGAGGATGGGTCTGTGATATCAAATATCCACACATCTAAATGGCGGGTTTTTACAGATAAGGCGAGGGACTTTTTTTTGG AAGGAAAATTAGTGGAAGCTGAAAAACTATTTTTGTCAGCGGTGGAGGAAGCTAAAGAGGGTTTTGGGAAGAGCGATCCA CATGTTGCTGCTGCATTAAACAATTTGGCTGAGCTCTATAGAGTGAAGAAGGATTTCGCTAAAGCTGAGCCACTCTATTT GGAGGCCGTCCATATTTTAGAGGAATCATTTGGACTTGACGATATACGTGTTGCAGCTTCTCTACACAACCTTGGGCAGT TTTATATTGTGCAGAGGAAACTTGAAGAAGCCCATAAGTGCTACGAGCGTGCGTTAAAGATAAAGAGGCGTGTTCTTGGA CAAAACCACACAGACTATGCAAATACAATGTATCATCTGGGAACGGTGAAGTATCTTCAAGGAAAGGAGAATGATTCAGT GGCTCTAATTCAAGATTCTATTAAGATACTAGAGGTTTTTCTGATCATCATGTTTGATGTTAATCTATATAGCTTCTTTT TTCTTTTCTTTTTTTCGTCTTCTTGA |