Microexon ID Os_4:11772179-11772190:+
Species Oryza sativa
Coordinates 4:11772179..11772190
Microexon Cluster ID MEP29
Size 12
Phase 0
Pfam Domain Motif TPR_12
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,12,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TTYTATCTTRTSCARMRSAARYTKGAWSAAGCYCRKRCWTGYTATGAGCGTGCTYTRAAGATAAARRGRCGTGTTYTGGGRSWTRRYCAYSCAGAYTATGCARAKACA
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq CGTGCTTTGAAG
Microexon Amino Acid seq RALK
Microexon-tag DNA Seq TGCTACCATCTTCAACGCAAGTTTGCTCTAGCTCAGACATGTTATGAGCGTGCTTTGAAGATAGAAGGACGTGTTATGGGGATTGGTCATCCAGAGTATGCAAGCACA
Microexon-tag Amino Acid Seq CYHLQRKFALAQTCYERALKIEGRVMGIGHPEYAST
Microexon-tag spanning region11771585-11772997
Microexon-tag prediction score0.9498
Overlapped with the annotated transcript (%) 100
New Transcript ID Os04t0278200-01x
Reference Transcript ID Os04t0278200-01
Gene ID Os04g0278200
Gene Name NA
Transcript ID Os04t0278200-01
Protein ID Os04t0278200-01
Gene ID Os04g0278200
Gene Name NA
Pfam domain motif TPR_12
Motif E-value 2e-16
Motif start 32
Motif end 104
Protein seq >Os04t0278200-01
MVKQRNLDEAEKFFQAALHEAKEGFGLRDPHVASALNNLAEFYRLKKEYEKAELLYLEAIEILEESFGSDDIRVGTALHS
LGICYHLQRKFALAQTCYERALKIEGRVMGIGHPEYASTMYLLGKVLSQQGKDAEALIEESIRILEESGLGESPICIQRM
RYLSTELIKSNRLAEAENWQRKILHNLELSKGWDSFDTTNAAELLTMTLQTMGKLKESEELLERCLEVRKRILSEEHFQV
CIIFNVSRDL*
CDS seq >Os04t0278200-01
TTGGTCAAGCAGAGAAACCTAGATGAAGCTGAGAAGTTTTTCCAGGCAGCCCTACATGAAGCGAAAGAAGGATTTGGACT
GAGAGATCCACATGTTGCGTCAGCCCTTAACAATCTGGCTGAGTTTTATAGGTTAAAGAAAGAATACGAGAAGGCTGAGC
TATTGTATCTGGAAGCAATTGAAATCCTGGAAGAATCATTTGGATCGGACGATATAAGGGTTGGAACTGCTTTGCATAGT
CTTGGAATATGCTACCATCTTCAACGCAAGTTTGCTCTAGCTCAGACATGTTATGAGCGTGCTTTGAAGATAGAAGGACG
TGTTATGGGGATTGGTCATCCAGAGTATGCAAGCACAATGTACCTTCTTGGCAAGGTGTTAAGTCAACAAGGAAAAGATG
CAGAAGCCCTTATTGAAGAGTCTATCAGGATATTGGAGGAGTCTGGGCTTGGTGAGTCACCAATATGCATACAAAGAATG
AGGTATCTCTCCACGGAGTTGATAAAGTCAAATCGACTTGCTGAAGCTGAAAATTGGCAAAGGAAGATATTACATAATCT
GGAACTCTCAAAGGGGTGGGATTCATTTGACACTACGAATGCAGCTGAACTCTTAACAATGACTCTTCAAACCATGGGGA
AGTTGAAGGAATCTGAAGAATTATTGGAAAGATGCCTTGAAGTCAGAAAAAGGATTTTGTCTGAGGAACATTTTCAGGTT
TGTATCATATTTAATGTTTCACGTGATCTTTAG
Microexon DNA seq NA
Microexon Amino Acid seq NA
Microexon-tag DNA Seq NA
Microexon-tag Amino Acid seq NA
Transcript ID Os04t0278200-01
Gene ID Os.21938
Gene Name NA
Pfam domain motif NA
Motif E-value NA
Motif start NA
Motif end NA
Protein seq
CDS seq