
Microexon ID | Gm_18:3488801-3488812:+ |
Species | Glycine max | Coordinates | 18:3488801..3488812 |
Microexon Cluster ID | MEP29 |
Size | 12 |
Phase | 0 |
Pfam Domain Motif | TPR_12 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,12,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TTYTATCTTRTSCARMRSAARYTKGAWSAAGCYCRKRCWTGYTATGAGCGTGCTYTRAAGATAAARRGRCGTGTTYTGGGRSWTRRYCAYSCAGAYTATGCARAKACA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | CGTGCTTTGAAG |
Microexon Amino Acid seq | RALK |
Microexon-tag DNA Seq | TTTTACCTTGGACAGCGGAAGTTGGAAGAAGCTCGTGTTAGCTATGAGCGTGCTTTGAAGATAAAAAGGCGTGTTCTGGGGTATGGCCATTCAGAATGTTCAGATACA |
Microexon-tag Amino Acid Seq | FYLGQRKLEEARVSYERALKIKRRVLGYGHSECSDT |
Microexon-tag spanning region | 3487951-3489018 |
Microexon-tag prediction score | 0.9668 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | KRG97950x |
Reference Transcript ID | KRG97950 |
Gene ID | GLYMA_18G041200 |
Gene Name | NA |
Transcript ID | KRG97950 |
Protein ID | KRG97950 |
Gene ID | GLYMA_18G041200 |
Gene Name | NA |
Pfam domain motif | TPR_12 |
Motif E-value | 7.1e-12 |
Motif start | 204 |
Motif end | 274 |
Protein seq | >KRG97950 MSLRVAAVNLLKKLRFPASHVFPASTVTTNAFSGKLKLSRWYQAGEHGWRIDLRDPCLWIVISGHVAMTLGISASTVFAE DATTEAYPDNDPGGDLIGLRKIEDGSVVSNIHTAKWRVFTDKAREFFLQGKLDEAEKLFLSAIEEAKEGFGEKDPHVASA CNNLAELYRVKKAFDKAEPLYLEAINILEESFGPDDVRVGVAVHNLGQFYLGQRKLEEARVSYERALKIKRRVLGYGHSE CSDTMYHLGVVLYLQGKERDAEAFIKDSIRMLEEGGEGESFICIRRLRYLSQIYMNSQQFAEAELVQRKILHVVELSKGW NSLDTVIAAESLALTLQASGNTKDSKEFLERCLNVRKDLLPGDHIQIGANLLHLARVAMLDCSQHKKLDVSRAKAELDMA KNHLHNSIRISCQCLEKVLKQKDKLKKFSKPGDSRKEGQVALAILLQSLNTLSSVELDKQELQEIQEKDINLEAREALLQ CISAYKEFVHKRSIADTPEIKKEYLSCLKRAQNLFGHKVDEELSNQNDFR* |
CDS seq | >KRG97950 ATGTCTCTGCGTGTGGCGGCAGTTAATTTGCTAAAAAAACTTCGCTTTCCTGCTTCCCATGTCTTCCCTGCTTCCACAGT AACCACAAATGCATTTTCCGGTAAACTCAAACTTTCCCGTTGGTATCAAGCTGGTGAACATGGTTGGAGGATAGATCTTA GGGATCCTTGTCTATGGATTGTTATATCTGGACATGTAGCAATGACATTAGGAATTAGTGCCAGCACTGTATTTGCTGAA GATGCAACAACTGAAGCATATCCTGATAATGACCCAGGGGGTGACTTAATTGGATTAAGAAAAATTGAGGATGGCTCTGT AGTATCAAACATACATACAGCAAAGTGGAGAGTCTTTACAGATAAAGCGAGAGAATTTTTTCTACAGGGAAAACTAGATG AAGCTGAAAAACTCTTCCTTTCTGCTATAGAAGAAGCTAAAGAAGGTTTCGGCGAGAAAGATCCGCATGTTGCTTCTGCA TGCAACAATCTGGCAGAATTGTACAGGGTCAAAAAGGCATTTGACAAAGCAGAACCATTGTATTTGGAAGCTATCAACAT ATTAGAGGAATCTTTTGGTCCTGATGATGTACGGGTTGGGGTCGCTGTTCACAACCTTGGGCAGTTTTACCTTGGACAGC GGAAGTTGGAAGAAGCTCGTGTTAGCTATGAGCGTGCTTTGAAGATAAAAAGGCGTGTTCTGGGGTATGGCCATTCAGAA TGTTCAGATACAATGTATCATCTAGGAGTGGTCCTGTATCTTCAAGGAAAAGAAAGGGATGCTGAGGCCTTTATTAAGGA CTCTATAAGGATGCTAGAGGAAGGTGGGGAAGGGGAGTCTTTTATATGCATTAGAAGACTACGATACCTCTCACAGATAT ATATGAATTCACAACAATTTGCTGAAGCTGAGTTGGTCCAGAGAAAGATCCTGCATGTTGTGGAATTGTCAAAGGGATGG AATTCCTTGGACACTGTTATTGCAGCTGAATCTTTGGCTCTGACCCTGCAAGCATCTGGCAATACAAAAGATTCAAAAGA GTTTCTTGAAAGATGTCTTAATGTCCGGAAGGACTTACTTCCTGGTGACCATATTCAGATAGGTGCAAACTTACTTCATC TAGCAAGAGTGGCAATGCTTGATTGCAGTCAACATAAAAAGTTGGATGTTTCTAGAGCTAAAGCTGAGCTTGATATGGCA AAGAATCATTTGCATAATTCCATAAGGATTTCATGTCAATGTTTAGAGAAGGTATTGAAACAAAAGGATAAGTTAAAGAA ATTCAGTAAGCCTGGAGATTCTAGAAAGGAAGGCCAAGTAGCACTGGCCATATTGTTGCAATCACTCAATACATTGTCAT CAGTGGAGTTAGATAAGCAAGAATTGCAGGAGATTCAGGAAAAAGATATTAACCTTGAGGCTCGGGAGGCACTTCTTCAA TGCATTTCTGCTTACAAGGAGTTTGTACATAAGAGGTCAATTGCTGATACCCCTGAAATAAAGAAAGAATATCTTTCATG TTTAAAGCGCGCTCAAAATTTGTTTGGTCATAAAGTTGATGAAGAGCTAAGCAATCAAAATGATTTCCGATAG |
Microexon DNA seq | CGTGCTTTGAAG |
Microexon Amino Acid seq | RALK |
Microexon-tag DNA Seq | TTTTACCTTGGACAGCGGAAGTTGGAAGAAGCTCGTGTTAGCTATGAGCGTGCTTTGAAGATAAAAAGGCGTGTTCTGGGGTATGGCCATTCAGAATGTTCAGATACA |
Microexon-tag Amino Acid seq | FYLGQRKLEEARVSYERALKIKRRVLGYGHSECSDT |
Transcript ID | KRG97950 |
Gene ID | Gm.24385 |
Gene Name | NA |
Pfam domain motif | TPR_12 |
Motif E-value | 7.1e-12 |
Motif start | 204 |
Motif end | 274 |
Protein seq | >KRG97950 MSLRVAAVNLLKKLRFPASHVFPASTVTTNAFSGKLKLSRWYQAGEHGWRIDLRDPCLWIVISGHVAMTLGISASTVFAE DATTEAYPDNDPGGDLIGLRKIEDGSVVSNIHTAKWRVFTDKAREFFLQGKLDEAEKLFLSAIEEAKEGFGEKDPHVASA CNNLAELYRVKKAFDKAEPLYLEAINILEESFGPDDVRVGVAVHNLGQFYLGQRKLEEARVSYERALKIKRRVLGYGHSE CSDTMYHLGVVLYLQGKERDAEAFIKDSIRMLEEGGEGESFICIRRLRYLSQIYMNSQQFAEAELVQRKILHVVELSKGW NSLDTVIAAESLALTLQASGNTKDSKEFLERCLNVRKDLLPGDHIQIGANLLHLARVAMLDCSQHKKLDVSRAKAELDMA KNHLHNSIRISCQCLEKVLKQKDKLKKFSKPGDSRKEGQVALAILLQSLNTLSSVELDKQELQEIQEKDINLEAREALLQ CISAYKEFVHKRSIADTPEIKKEYLSCLKRAQNLFGHKVDEELSNQNDFR* |
CDS seq | >KRG97950 ATGTCTCTGCGTGTGGCGGCAGTTAATTTGCTAAAAAAACTTCGCTTTCCTGCTTCCCATGTCTTCCCTGCTTCCACAGT AACCACAAATGCATTTTCCGGTAAACTCAAACTTTCCCGTTGGTATCAAGCTGGTGAACATGGTTGGAGGATAGATCTTA GGGATCCTTGTCTATGGATTGTTATATCTGGACATGTAGCAATGACATTAGGAATTAGTGCCAGCACTGTATTTGCTGAA GATGCAACAACTGAAGCATATCCTGATAATGACCCAGGGGGTGACTTAATTGGATTAAGAAAAATTGAGGATGGCTCTGT AGTATCAAACATACATACAGCAAAGTGGAGAGTCTTTACAGATAAAGCGAGAGAATTTTTTCTACAGGGAAAACTAGATG AAGCTGAAAAACTCTTCCTTTCTGCTATAGAAGAAGCTAAAGAAGGTTTCGGCGAGAAAGATCCGCATGTTGCTTCTGCA TGCAACAATCTGGCAGAATTGTACAGGGTCAAAAAGGCATTTGACAAAGCAGAACCATTGTATTTGGAAGCTATCAACAT ATTAGAGGAATCTTTTGGTCCTGATGATGTACGGGTTGGGGTCGCTGTTCACAACCTTGGGCAGTTTTACCTTGGACAGC GGAAGTTGGAAGAAGCTCGTGTTAGCTATGAGCGTGCTTTGAAGATAAAAAGGCGTGTTCTGGGGTATGGCCATTCAGAA TGTTCAGATACAATGTATCATCTAGGAGTGGTCCTGTATCTTCAAGGAAAAGAAAGGGATGCTGAGGCCTTTATTAAGGA CTCTATAAGGATGCTAGAGGAAGGTGGGGAAGGGGAGTCTTTTATATGCATTAGAAGACTACGATACCTCTCACAGATAT ATATGAATTCACAACAATTTGCTGAAGCTGAGTTGGTCCAGAGAAAGATCCTGCATGTTGTGGAATTGTCAAAGGGATGG AATTCCTTGGACACTGTTATTGCAGCTGAATCTTTGGCTCTGACCCTGCAAGCATCTGGCAATACAAAAGATTCAAAAGA GTTTCTTGAAAGATGTCTTAATGTCCGGAAGGACTTACTTCCTGGTGACCATATTCAGATAGGTGCAAACTTACTTCATC TAGCAAGAGTGGCAATGCTTGATTGCAGTCAACATAAAAAGTTGGATGTTTCTAGAGCTAAAGCTGAGCTTGATATGGCA AAGAATCATTTGCATAATTCCATAAGGATTTCATGTCAATGTTTAGAGAAGGTATTGAAACAAAAGGATAAGTTAAAGAA ATTCAGTAAGCCTGGAGATTCTAGAAAGGAAGGCCAAGTAGCACTGGCCATATTGTTGCAATCACTCAATACATTGTCAT CAGTGGAGTTAGATAAGCAAGAATTGCAGGAGATTCAGGAAAAAGATATTAACCTTGAGGCTCGGGAGGCACTTCTTCAA TGCATTTCTGCTTACAAGGAGTTTGTACATAAGAGGTCAATTGCTGATACCCCTGAAATAAAGAAAGAATATCTTTCATG TTTAAAGCGCGCTCAAAATTTGTTTGGTCATAAAGTTGATGAAGAGCTAAGCAATCAAAATGATTTCCGATAG |