
Microexon ID | Gm_11:30878240-30878251:- |
Species | Glycine max | Coordinates | 11:30878240..30878251 |
Microexon Cluster ID | MEP29 |
Size | 12 |
Phase | 0 |
Pfam Domain Motif | TPR_12 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,12,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TTYTATCTTRTSCARMRSAARYTKGAWSAAGCYCRKRCWTGYTATGAGCGTGCTYTRAAGATAAARRGRCGTGTTYTGGGRSWTRRYCAYSCAGAYTATGCARAKACA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | CGTGCTTTGAAG |
Microexon Amino Acid seq | RALK |
Microexon-tag DNA Seq | TTCTACCTTGGACAGCGGAAGTTGGAAGAAGCTCGTGTTAGCTATGAGCGTGCTTTGAAGATAAAAAGGCGTGTTCTGGGGTATGGCCATTCAGAATGTTCAGATACA |
Microexon-tag Amino Acid Seq | FYLGQRKLEEARVSYERALKIKRRVLGYGHSECSDT |
Microexon-tag spanning region | 30878044-30879085 |
Microexon-tag prediction score | 0.9674 |
Overlapped with the annotated transcript (%) | 88.89 |
New Transcript ID | KRH30928x |
Reference Transcript ID | KRH30928 |
Gene ID | GLYMA_11G215400 |
Gene Name | NA |
Gm_11:30878240-30878251:- does not have available information here.
Microexon DNA seq | CGTGCTTTGAAG |
Microexon Amino Acid seq | RALK |
Microexon-tag DNA Seq | TTCTACCTTGGACAGCGGAAGTTGGAAGAAGCTCGTGTTAGCTATGAGCGTGCTTTGAAGATAAAAAGGCGTGTTCTGGGGTATGGCCATTCAGAATGTTCAGATACA |
Microexon-tag Amino Acid seq | FYLGQRKLEEARVSYERALKIKRRVLGYGHSECSDT |
Transcript ID | Gm.7418.1 |
Gene ID | Gm.7418 |
Gene Name | NA |
Pfam domain motif | TPR_12 |
Motif E-value | 6.7e-12 |
Motif start | 159 |
Motif end | 231 |
Protein seq | >Gm.7418.1 MSLRVAAASLLKKLRFPASHFFAASTATTNAFSGKLKLFRWYQTGAHGCRIDLRDPCLWIVMSGHVAMTLGISASTVFAE DATTEASSDNDPGGDLIGLRKIEDDSVVSNIHTAKWRVFTDKARQFFLQGKLDEAEKLFLSAIEEAKEGFGEKDPHVASA CNNLAELYRVKKAFDKAEPLYLEAINILEESFGPDDVRVGVAVHNLGQFYLGQRKLEEARVSYERALKIKRRVLGYGHSE CSDTMYHLGVVLYLQGKERDAEALIKDSIRMLEEGGEGESFVCIRRLRYLSQIYMKSHRIAEAEMVQRKILHVMELSKGW YFLDTVIAAESLALTLQASGNTKDSKELLERCLNVRKDLLPSDHIQIGANLLHLARVAMLDCSQHKKLDVSRAKAELDMA KNHLYNSIRISRQCLEKVLKQKDKLKKFSKPGDSRKEGQVALAILLQSLYTLSSVELDKQELQEIQERDNINIEAQEALL QCISTYKEFVHKRSIADTPEIKNEYLSCLKRAQNLFGHKVDE* |
CDS seq | >Gm.7418.1 ATGTCTCTGCGTGTGGCGGCAGCAAGTTTGCTAAAAAAACTTCGCTTTCCGGCTTCACATTTCTTTGCTGCGTCTACAGC AACCACAAATGCATTTTCCGGTAAACTCAAACTTTTCCGTTGGTATCAAACTGGTGCACATGGTTGTAGGATAGATCTCA GGGATCCTTGTCTATGGATTGTTATGTCTGGACATGTAGCAATGACTTTAGGAATTAGTGCCAGCACTGTATTTGCAGAA GATGCAACAACTGAAGCATCTTCTGATAATGACCCAGGGGGTGACTTAATCGGATTGAGAAAAATTGAGGATGACTCTGT AGTATCAAACATACATACAGCAAAATGGAGAGTCTTTACAGATAAAGCGAGACAATTTTTTCTTCAGGGAAAACTAGATG AAGCTGAAAAACTCTTCCTTTCTGCTATAGAAGAAGCTAAAGAAGGTTTTGGCGAGAAAGACCCGCATGTTGCTTCTGCA TGCAACAATCTGGCAGAATTGTACAGGGTCAAAAAGGCATTTGACAAAGCAGAACCCTTGTATTTGGAAGCTATCAACAT ATTAGAGGAATCTTTTGGTCCTGATGATGTACGGGTTGGGGTTGCTGTTCACAACCTTGGGCAGTTCTACCTTGGACAGC GGAAGTTGGAAGAAGCTCGTGTTAGCTATGAGCGTGCTTTGAAGATAAAAAGGCGTGTTCTGGGGTATGGCCATTCAGAA TGTTCAGATACAATGTATCATCTAGGAGTGGTACTGTATCTTCAAGGAAAAGAAAGGGATGCTGAGGCCCTTATTAAGGA CTCTATAAGGATGCTAGAGGAAGGTGGTGAAGGAGAGTCTTTTGTATGCATTAGAAGACTACGATACCTTTCACAGATAT ATATGAAGTCACATCGAATTGCTGAAGCTGAAATGGTCCAGAGAAAGATCCTGCATGTTATGGAATTGTCAAAGGGATGG TATTTCTTGGACACTGTTATTGCAGCTGAATCTTTGGCTCTGACCCTGCAAGCATCTGGCAATACAAAAGATTCTAAAGA GCTTCTTGAAAGATGTCTTAATGTCCGGAAGGACTTACTTCCCAGTGACCATATTCAGATAGGTGCAAACTTACTTCATC TAGCAAGAGTGGCAATGCTTGATTGCAGTCAACATAAAAAGTTGGATGTTTCTAGAGCTAAAGCTGAGCTTGATATGGCA AAGAATCATTTGTATAATTCCATAAGGATTTCACGTCAATGTTTGGAGAAGGTATTGAAACAAAAGGACAAGTTAAAGAA ATTCAGTAAGCCTGGAGATTCTAGAAAGGAAGGCCAAGTAGCACTGGCCATATTGTTGCAATCACTCTATACGTTGTCAT CAGTGGAGTTAGATAAGCAAGAATTGCAGGAGATTCAGGAAAGAGATAATATTAACATCGAGGCTCAGGAGGCACTTCTT CAATGCATTTCTACTTACAAGGAGTTTGTACATAAGAGGTCAATTGCTGATACCCCTGAAATAAAGAACGAGTATCTTTC ATGTTTAAAGCGCGCTCAAAATTTGTTTGGTCATAAAGTTGATGAATAG |