Microexon ID Gm_11:30878240-30878251:-
Species Glycine max
Coordinates 11:30878240..30878251
Microexon Cluster ID MEP29
Size 12
Phase 0
Pfam Domain Motif TPR_12
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,12,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TTYTATCTTRTSCARMRSAARYTKGAWSAAGCYCRKRCWTGYTATGAGCGTGCTYTRAAGATAAARRGRCGTGTTYTGGGRSWTRRYCAYSCAGAYTATGCARAKACA
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq CGTGCTTTGAAG
Microexon Amino Acid seq RALK
Microexon-tag DNA Seq TTCTACCTTGGACAGCGGAAGTTGGAAGAAGCTCGTGTTAGCTATGAGCGTGCTTTGAAGATAAAAAGGCGTGTTCTGGGGTATGGCCATTCAGAATGTTCAGATACA
Microexon-tag Amino Acid Seq FYLGQRKLEEARVSYERALKIKRRVLGYGHSECSDT
Microexon-tag spanning region30878044-30879085
Microexon-tag prediction score0.9674
Overlapped with the annotated transcript (%) 88.89
New Transcript ID KRH30928x
Reference Transcript ID KRH30928
Gene ID GLYMA_11G215400
Gene Name NA
Gm_11:30878240-30878251:- does not have available information here.
Microexon DNA seq CGTGCTTTGAAG
Microexon Amino Acid seq RALK
Microexon-tag DNA Seq TTCTACCTTGGACAGCGGAAGTTGGAAGAAGCTCGTGTTAGCTATGAGCGTGCTTTGAAGATAAAAAGGCGTGTTCTGGGGTATGGCCATTCAGAATGTTCAGATACA
Microexon-tag Amino Acid seq FYLGQRKLEEARVSYERALKIKRRVLGYGHSECSDT
Transcript ID Gm.7418.1
Gene ID Gm.7418
Gene Name NA
Pfam domain motif TPR_12
Motif E-value 6.7e-12
Motif start 159
Motif end 231
Protein seq >Gm.7418.1
MSLRVAAASLLKKLRFPASHFFAASTATTNAFSGKLKLFRWYQTGAHGCRIDLRDPCLWIVMSGHVAMTLGISASTVFAE
DATTEASSDNDPGGDLIGLRKIEDDSVVSNIHTAKWRVFTDKARQFFLQGKLDEAEKLFLSAIEEAKEGFGEKDPHVASA
CNNLAELYRVKKAFDKAEPLYLEAINILEESFGPDDVRVGVAVHNLGQFYLGQRKLEEARVSYERALKIKRRVLGYGHSE
CSDTMYHLGVVLYLQGKERDAEALIKDSIRMLEEGGEGESFVCIRRLRYLSQIYMKSHRIAEAEMVQRKILHVMELSKGW
YFLDTVIAAESLALTLQASGNTKDSKELLERCLNVRKDLLPSDHIQIGANLLHLARVAMLDCSQHKKLDVSRAKAELDMA
KNHLYNSIRISRQCLEKVLKQKDKLKKFSKPGDSRKEGQVALAILLQSLYTLSSVELDKQELQEIQERDNINIEAQEALL
QCISTYKEFVHKRSIADTPEIKNEYLSCLKRAQNLFGHKVDE*
CDS seq >Gm.7418.1
ATGTCTCTGCGTGTGGCGGCAGCAAGTTTGCTAAAAAAACTTCGCTTTCCGGCTTCACATTTCTTTGCTGCGTCTACAGC
AACCACAAATGCATTTTCCGGTAAACTCAAACTTTTCCGTTGGTATCAAACTGGTGCACATGGTTGTAGGATAGATCTCA
GGGATCCTTGTCTATGGATTGTTATGTCTGGACATGTAGCAATGACTTTAGGAATTAGTGCCAGCACTGTATTTGCAGAA
GATGCAACAACTGAAGCATCTTCTGATAATGACCCAGGGGGTGACTTAATCGGATTGAGAAAAATTGAGGATGACTCTGT
AGTATCAAACATACATACAGCAAAATGGAGAGTCTTTACAGATAAAGCGAGACAATTTTTTCTTCAGGGAAAACTAGATG
AAGCTGAAAAACTCTTCCTTTCTGCTATAGAAGAAGCTAAAGAAGGTTTTGGCGAGAAAGACCCGCATGTTGCTTCTGCA
TGCAACAATCTGGCAGAATTGTACAGGGTCAAAAAGGCATTTGACAAAGCAGAACCCTTGTATTTGGAAGCTATCAACAT
ATTAGAGGAATCTTTTGGTCCTGATGATGTACGGGTTGGGGTTGCTGTTCACAACCTTGGGCAGTTCTACCTTGGACAGC
GGAAGTTGGAAGAAGCTCGTGTTAGCTATGAGCGTGCTTTGAAGATAAAAAGGCGTGTTCTGGGGTATGGCCATTCAGAA
TGTTCAGATACAATGTATCATCTAGGAGTGGTACTGTATCTTCAAGGAAAAGAAAGGGATGCTGAGGCCCTTATTAAGGA
CTCTATAAGGATGCTAGAGGAAGGTGGTGAAGGAGAGTCTTTTGTATGCATTAGAAGACTACGATACCTTTCACAGATAT
ATATGAAGTCACATCGAATTGCTGAAGCTGAAATGGTCCAGAGAAAGATCCTGCATGTTATGGAATTGTCAAAGGGATGG
TATTTCTTGGACACTGTTATTGCAGCTGAATCTTTGGCTCTGACCCTGCAAGCATCTGGCAATACAAAAGATTCTAAAGA
GCTTCTTGAAAGATGTCTTAATGTCCGGAAGGACTTACTTCCCAGTGACCATATTCAGATAGGTGCAAACTTACTTCATC
TAGCAAGAGTGGCAATGCTTGATTGCAGTCAACATAAAAAGTTGGATGTTTCTAGAGCTAAAGCTGAGCTTGATATGGCA
AAGAATCATTTGTATAATTCCATAAGGATTTCACGTCAATGTTTGGAGAAGGTATTGAAACAAAAGGACAAGTTAAAGAA
ATTCAGTAAGCCTGGAGATTCTAGAAAGGAAGGCCAAGTAGCACTGGCCATATTGTTGCAATCACTCTATACGTTGTCAT
CAGTGGAGTTAGATAAGCAAGAATTGCAGGAGATTCAGGAAAGAGATAATATTAACATCGAGGCTCAGGAGGCACTTCTT
CAATGCATTTCTACTTACAAGGAGTTTGTACATAAGAGGTCAATTGCTGATACCCCTGAAATAAAGAACGAGTATCTTTC
ATGTTTAAAGCGCGCTCAAAATTTGTTTGGTCATAAAGTTGATGAATAG