
Microexon ID | At_5:14930173-14930184:- |
Species | Arabidopsis thaliana | Coordinates | 5:14930173..14930184 |
Microexon Cluster ID | MEP29 |
Size | 12 |
Phase | 0 |
Pfam Domain Motif | TPR_12 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,12,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TTYTATCTTRTSCARMRSAARYTKGAWSAAGCYCRKRCWTGYTATGAGCGTGCTYTRAAGATAAARRGRCGTGTTYTGGGRSWTRRYCAYSCAGAYTATGCARAKACA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | CGTGCTTTAAAG |
Microexon Amino Acid seq | RALK |
Microexon-tag DNA Seq | CTCTATCTTGTCCAGCGAAAACTTGAGGAAGCTCGTGCGTGCTATGAGCGTGCTTTAAAGTTGAAAGGACGAGTCCTGGGGTATAATCATCCGGATTATGCAGAGACA |
Microexon-tag Amino Acid Seq | LYLVQRKLEEARACYERALKLKGRVLGYNHPDYAET |
Microexon-tag spanning region | 14930027-14930707 |
Microexon-tag prediction score | 0.9586 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | AT5G37590.1x |
Reference Transcript ID | AT5G37590.1 |
Gene ID | AT5G37590 |
Gene Name | NA |
Transcript ID | AT5G37590.1 |
Protein ID | AT5G37590.1 |
Gene ID | AT5G37590 |
Gene Name | NA |
Pfam domain motif | TPR_12 |
Motif E-value | 3.8e-15 |
Motif start | 205 |
Motif end | 278 |
Protein seq | >AT5G37590.1 MSLLRILSTLYKGTHRTSRSFSSSRNLICTTFANPLSGKPRISYQNDYGGHRTNLHLLDSRLWIILSGQAAILGFCGNTV LAEDESMKSKSGDNMDESGNTGLEKIEDGSVVSNIHTSKWRVFTDSGRDYFFQGKLEPAERLFGSAIQEAKEGFGEKDPH VASACNNLAELYRVKKEFDKAEPLYLEAVSILEEFYGPDDVRVGATLHNLGQLYLVQRKLEEARACYERALKLKGRVLGY NHPDYAETMYHLGTVLHMLGKNTDAEALILDSLKILEEGGQGESMAYIRRLRYLSQIYIRSNRLAEAEKLQRKLLHMMEL SKGWNSMEAITAAEALALTLRLSGKLGEALELFEKCLNARKKLLPEGHIQIGGNLLHIAKTFMLQASQMRRTDNSEALSK LEKAKNYLENSARIAKDVLHKLKNQKSKAQKDEKSSAALRNYEHAALVILLQSLESLAALEMSKNEIHEPKEENLHAAED SLLQCVTAYKEFGYGTQLQDSSEVKSEYLSCLKHLSALLAKKETTLNSKASPISLPELKEEIKRIDIDLRSQKTG* |
CDS seq | >AT5G37590.1 ATGTCTCTGCTTCGAATTTTGTCGACTCTTTACAAAGGAACTCATCGGACTTCACGTTCCTTCTCTTCTTCGCGGAATCT GATCTGCACCACTTTCGCTAATCCACTCTCCGGGAAACCGAGGATTTCGTATCAGAATGATTATGGAGGCCATAGAACAA ATTTGCATCTCTTGGATTCTCGGCTTTGGATTATCTTATCTGGACAAGCTGCAATCCTTGGGTTTTGTGGGAACACTGTA TTGGCAGAGGATGAGTCTATGAAGTCGAAATCTGGAGATAATATGGATGAGAGTGGCAATACTGGGCTAGAAAAAATTGA GGACGGGTCGGTTGTATCTAATATACACACATCTAAGTGGAGGGTGTTTACTGATAGTGGAAGAGATTATTTCTTTCAGG GGAAACTCGAGCCGGCTGAGAGACTTTTCGGTTCGGCAATACAGGAAGCTAAGGAAGGTTTTGGAGAGAAGGATCCACAT GTTGCATCTGCATGCAACAATCTGGCAGAGTTATATAGAGTCAAGAAAGAATTCGACAAAGCAGAGCCTTTATACCTAGA AGCTGTTAGTATCTTGGAGGAGTTCTACGGTCCTGACGATGTGCGTGTTGGTGCTACTCTCCACAACCTTGGACAACTCT ATCTTGTCCAGCGAAAACTTGAGGAAGCTCGTGCGTGCTATGAGCGTGCTTTAAAGTTGAAAGGACGAGTCCTGGGGTAT AATCATCCGGATTATGCAGAGACAATGTATCATCTTGGAACGGTATTACATATGCTAGGAAAAAATACAGATGCGGAAGC TCTTATTCTGGATTCTCTTAAAATACTTGAGGAAGGTGGTCAAGGAGAGTCCATGGCATATATCAGGAGACTGAGATATC TTTCTCAGATATATATACGATCCAATCGTCTGGCCGAGGCTGAAAAACTTCAAAGGAAATTATTGCACATGATGGAATTA TCGAAGGGATGGAACTCAATGGAGGCAATAACTGCAGCTGAAGCATTGGCTCTCACTTTACGATTATCTGGGAAGCTGGG AGAAGCTCTAGAACTTTTTGAAAAGTGTCTCAATGCCCGAAAAAAATTACTTCCAGAAGGACATATCCAGATAGGTGGAA ACTTGCTGCACATCGCAAAGACATTTATGCTTCAGGCTAGTCAGATGAGAAGAACTGATAACAGTGAAGCTCTATCCAAA CTAGAAAAAGCAAAGAATTATCTTGAAAACTCAGCTAGGATAGCAAAGGACGTTCTGCATAAGCTTAAAAACCAAAAGAG CAAAGCGCAGAAAGACGAAAAATCCAGTGCAGCTCTTAGGAATTATGAACACGCGGCTTTAGTCATACTGCTGCAATCTC TTGAGAGTCTTGCAGCTTTGGAGATGAGCAAAAATGAGATCCATGAGCCAAAGGAAGAAAATCTGCATGCAGCTGAAGAT TCACTTCTCCAATGTGTTACAGCTTACAAAGAGTTTGGTTATGGAACTCAGCTGCAAGATTCTTCTGAAGTAAAGTCAGA ATACCTTTCGTGTCTTAAGCATCTCTCAGCTTTATTAGCAAAGAAAGAGACGACGCTTAACTCAAAGGCAAGTCCTATTT CTTTACCAGAGCTCAAGGAAGAAATTAAGCGTATTGACATCGATCTTCGTTCACAAAAGACAGGCTAA |
Microexon DNA seq | CGTGCTTTAAAG |
Microexon Amino Acid seq | RALK |
Microexon-tag DNA Seq | CTCTATCTTGTCCAGCGAAAACTTGAGGAAGCTCGTGCGTGCTATGAGCGTGCTTTAAAGTTGAAAGGACGAGTCCTGGGGTATAATCATCCGGATTATGCAGAGACA |
Microexon-tag Amino Acid seq | LYLVQRKLEEARACYERALKLKGRVLGYNHPDYAET |
Transcript ID | AT5G37590.1 |
Gene ID | At.24743 |
Gene Name | NA |
Pfam domain motif | TPR_12 |
Motif E-value | 3.8e-15 |
Motif start | 205 |
Motif end | 278 |
Protein seq | >AT5G37590.1 MSLLRILSTLYKGTHRTSRSFSSSRNLICTTFANPLSGKPRISYQNDYGGHRTNLHLLDSRLWIILSGQAAILGFCGNTV LAEDESMKSKSGDNMDESGNTGLEKIEDGSVVSNIHTSKWRVFTDSGRDYFFQGKLEPAERLFGSAIQEAKEGFGEKDPH VASACNNLAELYRVKKEFDKAEPLYLEAVSILEEFYGPDDVRVGATLHNLGQLYLVQRKLEEARACYERALKLKGRVLGY NHPDYAETMYHLGTVLHMLGKNTDAEALILDSLKILEEGGQGESMAYIRRLRYLSQIYIRSNRLAEAEKLQRKLLHMMEL SKGWNSMEAITAAEALALTLRLSGKLGEALELFEKCLNARKKLLPEGHIQIGGNLLHIAKTFMLQASQMRRTDNSEALSK LEKAKNYLENSARIAKDVLHKLKNQKSKAQKDEKSSAALRNYEHAALVILLQSLESLAALEMSKNEIHEPKEENLHAAED SLLQCVTAYKEFGYGTQLQDSSEVKSEYLSCLKHLSALLAKKETTLNSKASPISLPELKEEIKRIDIDLRSQKTG* |
CDS seq | >AT5G37590.1 ATGTCTCTGCTTCGAATTTTGTCGACTCTTTACAAAGGAACTCATCGGACTTCACGTTCCTTCTCTTCTTCGCGGAATCT GATCTGCACCACTTTCGCTAATCCACTCTCCGGGAAACCGAGGATTTCGTATCAGAATGATTATGGAGGCCATAGAACAA ATTTGCATCTCTTGGATTCTCGGCTTTGGATTATCTTATCTGGACAAGCTGCAATCCTTGGGTTTTGTGGGAACACTGTA TTGGCAGAGGATGAGTCTATGAAGTCGAAATCTGGAGATAATATGGATGAGAGTGGCAATACTGGGCTAGAAAAAATTGA GGACGGGTCGGTTGTATCTAATATACACACATCTAAGTGGAGGGTGTTTACTGATAGTGGAAGAGATTATTTCTTTCAGG GGAAACTCGAGCCGGCTGAGAGACTTTTCGGTTCGGCAATACAGGAAGCTAAGGAAGGTTTTGGAGAGAAGGATCCACAT GTTGCATCTGCATGCAACAATCTGGCAGAGTTATATAGAGTCAAGAAAGAATTCGACAAAGCAGAGCCTTTATACCTAGA AGCTGTTAGTATCTTGGAGGAGTTCTACGGTCCTGACGATGTGCGTGTTGGTGCTACTCTCCACAACCTTGGACAACTCT ATCTTGTCCAGCGAAAACTTGAGGAAGCTCGTGCGTGCTATGAGCGTGCTTTAAAGTTGAAAGGACGAGTCCTGGGGTAT AATCATCCGGATTATGCAGAGACAATGTATCATCTTGGAACGGTATTACATATGCTAGGAAAAAATACAGATGCGGAAGC TCTTATTCTGGATTCTCTTAAAATACTTGAGGAAGGTGGTCAAGGAGAGTCCATGGCATATATCAGGAGACTGAGATATC TTTCTCAGATATATATACGATCCAATCGTCTGGCCGAGGCTGAAAAACTTCAAAGGAAATTATTGCACATGATGGAATTA TCGAAGGGATGGAACTCAATGGAGGCAATAACTGCAGCTGAAGCATTGGCTCTCACTTTACGATTATCTGGGAAGCTGGG AGAAGCTCTAGAACTTTTTGAAAAGTGTCTCAATGCCCGAAAAAAATTACTTCCAGAAGGACATATCCAGATAGGTGGAA ACTTGCTGCACATCGCAAAGACATTTATGCTTCAGGCTAGTCAGATGAGAAGAACTGATAACAGTGAAGCTCTATCCAAA CTAGAAAAAGCAAAGAATTATCTTGAAAACTCAGCTAGGATAGCAAAGGACGTTCTGCATAAGCTTAAAAACCAAAAGAG CAAAGCGCAGAAAGACGAAAAATCCAGTGCAGCTCTTAGGAATTATGAACACGCGGCTTTAGTCATACTGCTGCAATCTC TTGAGAGTCTTGCAGCTTTGGAGATGAGCAAAAATGAGATCCATGAGCCAAAGGAAGAAAATCTGCATGCAGCTGAAGAT TCACTTCTCCAATGTGTTACAGCTTACAAAGAGTTTGGTTATGGAACTCAGCTGCAAGATTCTTCTGAAGTAAAGTCAGA ATACCTTTCGTGTCTTAAGCATCTCTCAGCTTTATTAGCAAAGAAAGAGACGACGCTTAACTCAAAGGCAAGTCCTATTT CTTTACCAGAGCTCAAGGAAGAAATTAAGCGTATTGACATCGATCTTCGTTCACAAAAGACAGGCTAA |