
Microexon ID | Zm_1:205436361-205436372:+ |
Species | Zea mays | Coordinates | 1:205436361..205436372 |
Microexon Cluster ID | MEP28 |
Size | 12 |
Phase | 0 |
Pfam Domain Motif | Peptidase_M1 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 24,19,5,12,48 |
Microexon location in the Microexon-tag | 4 |
Microexon-tag DNA Seq | GTTMGRCCWCAYTCTTAYATYAAGATGGACAACTTCTAYACAGTRACGGTKTATGARAAGGGWGCTGAAGTTGTCMGRATGTACAARACMTTRYTKGGRAGTYMAGGR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTTTACGAGAAG |
Microexon Amino Acid seq | VYEK |
Microexon-tag DNA Seq | ATCCGTCCCCATTCTTATATCAAGATGGACAACTTCTATACTGTTACGGTTTACGAGAAGGGTGCTGAAGTTGTCAGAATGTACAAGACCATGTTTGGAGCATCAGGG |
Microexon-tag Amino Acid Seq | IRPHSYIKMDNFYTVTVYEKGAEVVRMYKTMFGASG |
Microexon-tag spanning region | 205435934-205436504 |
Microexon-tag prediction score | 0.9702 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Zm00001d031891_T002x |
Reference Transcript ID | Zm00001d031891_T002 |
Gene ID | Zm00001d031891 |
Gene Name | NA |
Transcript ID | Zm00001d031891_T002 |
Protein ID | Zm00001d031891_P002 |
Gene ID | Zm00001d031891 |
Gene Name | NA |
Pfam domain motif | Peptidase_M1 |
Motif E-value | 2.8e-48 |
Motif start | 231 |
Motif end | 442 |
Protein seq | >Zm00001d031891_P002 MDVPKEIFLKDYKAPDYYFDTVDLQFQLGEEKTIVTSKIVVSPGVEAGISAPLVLHGHDLKLISIKVNGTELKGEEYKVN SRHLMLSTPPAVVFNLEIVTEIYPQLNTSLEGLYKSTGNFCTQCEAEGFRKITYFQDRPDVMAKYTCRIEADKTLYPVLL SNGNLIEQGDLEGGKHYALWEDPFKKPSYLFALVAGQLGCREDSFVTCSGRNVTLRIWTPAQDLPKTAHAMYSLKAAMKW DEEVFGLEYDLDLFNIVVVPDFNMGAMENKSLNIFQSRLVLASPETATDGDYAAILGVVGHEYFHNWTGNRVTCRDWFQL TLKEGLTVFRDQEFSSDLGCRTVKRIADVSKLRIYQFPQDAGPMAHPIRPHSYIKMDNFYTVTVYEKGAEVVRMYKTMFG ASGFRKGMDLYFKRHDGQAVTCEDFYAAMCDANNAQLPNFLQWYSQAGTPIVKVASSYDPSSQTFSLKLSQEVPPTPGQP VKEPMFIPVAVGLVDSTGKDMPLTSKEEEFMFKNIPERPVPSLLRGYSAPVRLDSDLSEGDLFFLLASDSDEFNRWEAGQ VLARKLMLSLVADFQQQKTLVLNPKFVDGIRSILRNTSLDKEFIAKAITLPGQGEIMDMMEVADPDAVHAVKSNRSSEAY TFNHDSMARRALKNTCLAYLASLNEPDFVELALHEYKSATNMTEQFAALAALSQNPGQVRDDALLDFYNKWQHEYLVVSK WFALQATSEIPGNVANVQKLLSHPAFDLRNPNKVYSLIGGFCGSPVNFHAKDGSGYKFLGEIVLQLDKINPQVASRMVSA FSRWRRYDKTRQALAKAQLEMIVSANGLSENVFEIASKSLAD* |
CDS seq | >Zm00001d031891_T002 ATGGATGTCCCCAAGGAGATATTCTTGAAAGATTACAAGGCACCTGATTATTATTTTGACACGGTGGATTTACAATTTCA ACTTGGTGAAGAAAAGACCATAGTTACATCTAAAATAGTTGTATCTCCTGGAGTTGAAGCAGGCATCTCAGCTCCACTAG TTCTTCATGGGCATGACCTCAAGCTCATATCAATCAAAGTCAATGGCACTGAATTAAAGGGTGAAGAGTATAAAGTCAAT TCTCGCCATCTGATGCTTTCAACACCTCCTGCTGTTGTATTCAACTTGGAAATTGTCACAGAAATATATCCCCAGCTAAA CACATCACTGGAGGGGCTGTACAAGTCTACTGGTAACTTCTGCACCCAGTGTGAAGCAGAAGGGTTTCGGAAGATTACCT ACTTTCAGGACCGCCCAGATGTTATGGCAAAATATACTTGCCGCATTGAAGCTGATAAAACTTTGTATCCGGTTTTATTG TCCAATGGGAATCTTATTGAGCAGGGAGACCTTGAGGGTGGAAAGCATTACGCACTGTGGGAGGATCCCTTCAAGAAACC AAGCTACCTGTTTGCTCTAGTTGCTGGTCAGCTGGGATGCCGGGAGGATTCATTTGTTACATGCTCTGGCCGCAACGTAA CACTAAGAATTTGGACTCCTGCCCAAGATTTACCAAAAACAGCACATGCTATGTATTCTCTTAAAGCAGCAATGAAATGG GATGAGGAGGTCTTTGGTCTGGAGTATGATCTTGATTTATTCAACATTGTTGTTGTTCCTGATTTCAATATGGGAGCAAT GGAAAACAAGAGCTTGAATATATTTCAATCTAGACTTGTGTTGGCATCACCGGAGACTGCCACTGATGGTGATTATGCTG CTATTTTGGGTGTTGTTGGACATGAGTATTTCCACAACTGGACTGGGAATAGAGTAACTTGCCGTGATTGGTTCCAGCTA ACCCTGAAAGAAGGACTGACCGTTTTCAGGGATCAGGAGTTCTCTTCAGATCTTGGCTGTCGTACGGTAAAACGTATTGC TGATGTCTCCAAACTTAGAATCTATCAATTCCCACAGGACGCCGGGCCTATGGCACATCCTATCCGTCCCCATTCTTATA TCAAGATGGACAACTTCTATACTGTTACGGTTTACGAGAAGGGTGCTGAAGTTGTCAGAATGTACAAGACCATGTTTGGA GCATCAGGGTTCCGAAAGGGCATGGATCTTTATTTTAAAAGGCATGATGGGCAAGCTGTCACTTGTGAAGACTTCTATGC AGCCATGTGTGATGCAAATAATGCACAACTGCCAAACTTTTTACAATGGTACTCTCAAGCAGGTACGCCTATAGTCAAGG TGGCATCTTCATATGATCCTAGTTCTCAGACATTCTCTTTGAAACTTAGCCAAGAAGTACCACCCACTCCTGGCCAGCCG GTTAAGGAGCCTATGTTCATACCTGTTGCTGTTGGACTTGTTGACTCTACTGGAAAAGATATGCCCCTCACTTCCAAAGA AGAAGAGTTTATGTTTAAAAACATTCCTGAGAGGCCAGTTCCTTCTTTGTTAAGGGGATATAGTGCTCCTGTCCGTCTAG ATTCTGATCTGAGTGAGGGTGACCTATTTTTCTTGCTTGCCAGTGACTCGGATGAATTTAACAGATGGGAAGCTGGCCAA GTTTTGGCACGTAAGTTGATGCTCAGTCTCGTAGCTGATTTCCAGCAACAGAAAACACTGGTTCTAAATCCGAAATTTGT TGATGGGATTAGATCAATTCTGCGCAACACAAGCTTGGATAAGGAATTCATTGCGAAAGCAATAACTTTGCCTGGTCAAG GGGAGATTATGGATATGATGGAAGTTGCAGATCCTGATGCAGTTCATGCTGTGAAAAGCAACAGGAGTTCTGAGGCTTAC ACATTTAACCATGATAGTATGGCTCGCCGTGCATTAAAAAATACATGCCTTGCATACCTTGCGTCATTGAATGAGCCAGA TTTCGTTGAGCTTGCACTGCATGAGTACAAGTCTGCGACTAACATGACAGAGCAGTTTGCTGCATTAGCAGCATTATCCC AAAATCCAGGCCAAGTTCGTGATGATGCCCTCTTGGATTTCTATAACAAGTGGCAGCATGAATACTTGGTTGTAAGCAAG TGGTTTGCTCTTCAAGCTACTTCAGAGATTCCTGGAAATGTTGCAAATGTTCAGAAGCTGCTGTCTCACCCTGCTTTCGA CCTGAGGAATCCCAACAAGGTGTACTCACTAATCGGGGGATTCTGTGGCTCACCTGTGAACTTCCACGCGAAAGATGGTT CTGGGTACAAGTTCTTGGGTGAGATCGTTTTGCAGCTTGACAAGATAAACCCTCAGGTGGCCTCCCGCATGGTTTCAGCA TTTTCTCGGTGGAGGCGGTACGACAAGACCAGACAAGCTCTTGCTAAGGCCCAGCTGGAGATGATCGTGTCGGCCAATGG GCTCTCCGAAAACGTGTTCGAGATTGCTTCAAAAAGCTTGGCGGATTAG |
Microexon DNA seq | GTTTACGAGAAG |
Microexon Amino Acid seq | VYEK |
Microexon-tag DNA Seq | ATCCGTCCCCATTCTTATATCAAGATGGACAACTTCTATACTGTTACGGTTTACGAGAAGGGTGCTGAAGTTGTCAGAATGTACAAGACCATGTTTGGAGCATCAGGG |
Microexon-tag Amino Acid seq | IRPHSYIKMDNFYTVTVYEKGAEVVRMYKTMFGASG |
Transcript ID | Zm.3466.1 |
Gene ID | Zm.3466 |
Gene Name | NA |
Pfam domain motif | Peptidase_M1 |
Motif E-value | 3.1e-48 |
Motif start | 230 |
Motif end | 441 |
Protein seq | >Zm.3466.1 MDVPKEIFLKDYKAPDYYFDTVDLQFQLGEEKTIVTSKIVVSPGVEGISAPLVLHGHDLKLISIKVNGTELKGEEYKVNS RHLMLSTPPAVVFNLEIVTEIYPQLNTSLEGLYKSTGNFCTQCEAEGFRKITYFQDRPDVMAKYTCRIEADKTLYPVLLS NGNLIEQGDLEGGKHYALWEDPFKKPSYLFALVAGQLGCREDSFVTCSGRNVTLRIWTPAQDLPKTAHAMYSLKAAMKWD EEVFGLEYDLDLFNIVVVPDFNMGAMENKSLNIFQSRLVLASPETATDGDYAAILGVVGHEYFHNWTGNRVTCRDWFQLT LKEGLTVFRDQEFSSDLGCRTVKRIADVSKLRIYQFPQDAGPMAHPIRPHSYIKMDNFYTVTVYEKGAEVVRMYKTMFGA SGFRKGMDLYFKRHDGQAVTCEDFYAAMCDANNAQLPNFLQWYSQAGTPIVKVASSYDPSSQTFSLKLSQEVPPTPGQPV KEPMFIPVAVGLVDSTGKDMPLTSVYSDGSLQTVSTDGQPVFTTVLQFKKKEEEFMFKNIPERPVPSLLRGYSAPVRLDS DLSEGDLFFLLASDSDEFNRWEAGQVLARKLMLSLVADFQQQKTLVLNPKFVDGIRSILRNTSLDKEFIAKAITLPGQGE IMDMMEVADPDAVHAVRNFIKKELAVQLKDDLLAAVKSNRSSEAYTFNHDSMARRALKNTCLAYLASLNEPDFVELALHE YKSATNMTEQFAALAALSQNPGQVRDDALLDFYNKWQHEYLVVSKWFALQATSEIPGNVANVQKLLSHPAFDLRNPNKVY SLIGGFCGSPVNFHAKDGSGYKFLGEIVLQLDKINPQVASRMVSAFSRWRRYDKTRQALAKAQLEMIVSANGLSENVFEI ASKSLAD* |
CDS seq | >Zm.3466.1 ATGGATGTCCCCAAGGAGATATTCTTGAAAGATTACAAGGCACCTGATTATTATTTTGACACGGTGGATTTACAATTTCA ACTTGGTGAAGAAAAGACCATAGTTACATCTAAAATAGTTGTATCTCCTGGAGTTGAAGGCATCTCAGCTCCACTAGTTC TTCATGGGCATGACCTCAAGCTCATATCAATCAAAGTCAATGGCACTGAATTAAAGGGTGAAGAGTATAAAGTCAATTCT CGCCATCTGATGCTTTCAACACCTCCTGCTGTTGTATTCAACTTGGAAATTGTCACAGAAATATATCCCCAGCTAAACAC ATCACTGGAGGGGCTGTACAAGTCTACTGGTAACTTCTGCACCCAGTGTGAAGCAGAAGGGTTTCGGAAGATTACCTACT TTCAGGACCGCCCAGATGTTATGGCAAAATATACTTGCCGCATTGAAGCTGATAAAACTTTGTATCCGGTTTTATTGTCC AATGGGAATCTTATTGAGCAGGGAGACCTTGAGGGTGGAAAGCATTACGCACTGTGGGAGGATCCCTTCAAGAAACCAAG CTACCTGTTTGCTCTAGTTGCTGGTCAGCTGGGATGCCGGGAGGATTCATTTGTTACATGCTCTGGCCGCAACGTAACAC TAAGAATTTGGACTCCTGCCCAAGATTTACCAAAAACAGCACATGCTATGTATTCTCTTAAAGCAGCAATGAAATGGGAT GAGGAGGTCTTTGGTCTGGAGTATGATCTTGATTTATTCAACATTGTTGTTGTTCCTGATTTCAATATGGGAGCAATGGA AAACAAGAGCTTGAATATATTTCAATCTAGACTTGTGTTGGCATCACCGGAGACTGCCACTGATGGTGATTATGCTGCTA TTTTGGGTGTTGTTGGACATGAGTATTTCCACAACTGGACTGGGAATAGAGTAACTTGCCGTGATTGGTTCCAGCTAACC CTGAAAGAAGGACTGACCGTTTTCAGGGATCAGGAGTTCTCTTCAGATCTTGGCTGTCGTACGGTAAAACGTATTGCTGA TGTCTCCAAACTTAGAATCTATCAATTCCCACAGGACGCCGGGCCTATGGCACATCCTATCCGTCCCCATTCTTATATCA AGATGGACAACTTCTATACTGTTACGGTTTACGAGAAGGGTGCTGAAGTTGTCAGAATGTACAAGACCATGTTTGGAGCA TCAGGGTTCCGAAAGGGCATGGATCTTTATTTTAAAAGGCATGATGGGCAAGCTGTCACTTGTGAAGACTTCTATGCAGC CATGTGTGATGCAAATAATGCACAACTGCCAAACTTTTTACAATGGTACTCTCAAGCAGGTACGCCTATAGTCAAGGTGG CATCTTCATATGATCCTAGTTCTCAGACATTCTCTTTGAAACTTAGCCAAGAAGTACCACCCACTCCTGGCCAGCCGGTT AAGGAGCCTATGTTCATACCTGTTGCTGTTGGACTTGTTGACTCTACTGGAAAAGATATGCCCCTCACTTCCGTTTACAG TGATGGAAGTCTCCAAACAGTCTCTACTGATGGCCAGCCAGTCTTCACTACTGTGCTTCAGTTTAAAAAGAAAGAAGAAG AGTTTATGTTTAAAAACATTCCTGAGAGGCCAGTTCCTTCTTTGTTAAGGGGATATAGTGCTCCTGTCCGTCTAGATTCT GATCTGAGTGAGGGTGACCTATTTTTCTTGCTTGCCAGTGACTCGGATGAATTTAACAGATGGGAAGCTGGCCAAGTTTT GGCACGTAAGTTGATGCTCAGTCTCGTAGCTGATTTCCAGCAACAGAAAACACTGGTTCTAAATCCGAAATTTGTTGATG GGATTAGATCAATTCTGCGCAACACAAGCTTGGATAAGGAATTCATTGCGAAAGCAATAACTTTGCCTGGTCAAGGGGAG ATTATGGATATGATGGAAGTTGCAGATCCTGATGCAGTTCATGCTGTCCGTAACTTTATTAAGAAGGAGCTTGCCGTGCA ACTTAAAGATGATCTTCTTGCGGCTGTGAAAAGCAACAGGAGTTCTGAGGCTTACACATTTAACCATGATAGTATGGCTC GCCGTGCATTAAAAAATACATGCCTTGCATACCTTGCGTCATTGAATGAGCCAGATTTCGTTGAGCTTGCACTGCATGAG TACAAGTCTGCGACTAACATGACAGAGCAGTTTGCTGCATTAGCAGCATTATCCCAAAATCCAGGCCAAGTTCGTGATGA TGCCCTCTTGGATTTCTATAACAAGTGGCAGCATGAATACTTGGTTGTAAGCAAGTGGTTTGCTCTTCAAGCTACTTCAG AGATTCCTGGAAATGTTGCAAATGTTCAGAAGCTGCTGTCTCACCCTGCTTTCGACCTGAGGAATCCCAACAAGGTGTAC TCACTAATCGGGGGATTCTGTGGCTCACCTGTGAACTTCCACGCGAAAGATGGTTCTGGGTACAAGTTCTTGGGTGAGAT CGTTTTGCAGCTTGACAAGATAAACCCTCAGGTGGCCTCCCGCATGGTTTCAGCATTTTCTCGGTGGAGGCGGTACGACA AGACCAGACAAGCTCTTGCTAAGGCCCAGCTGGAGATGATCGTGTCGGCCAATGGGCTCTCCGAAAACGTGTTCGAGATT GCTTCAAAAAGCTTGGCGGATTAG |