
Microexon ID | Vv_2:2804071-2804082:+ |
Species | Vistis vinifera | Coordinates | 2:2804071..2804082 |
Microexon Cluster ID | MEP28 |
Size | 12 |
Phase | 0 |
Pfam Domain Motif | Peptidase_M1 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 24,19,5,12,48 |
Microexon location in the Microexon-tag | 4 |
Microexon-tag DNA Seq | GTTMGRCCWCAYTCTTAYATYAAGATGGACAACTTCTAYACAGTRACGGTKTATGARAAGGGWGCTGAAGTTGTCMGRATGTACAARACMTTRYTKGGRAGTYMAGGR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTTTATGAAAAG |
Microexon Amino Acid seq | VYEK |
Microexon-tag DNA Seq | GTACGGCCACATTCTTACATCAAGATGGACAACTTCTACACAGTCACGGTTTATGAAAAGGGTGCTGAAGTTGTCAGGATGTACAAAACCTTGCTAGGAAGTCAAGGA |
Microexon-tag Amino Acid Seq | VRPHSYIKMDNFYTVTVYEKGAEVVRMYKTLLGSQG |
Microexon-tag spanning region | 2803646-2804227 |
Microexon-tag prediction score | 0.9903 |
Overlapped with the annotated transcript (%) | 44.44 |
New Transcript ID | VIT_02s0025g03280.t01x |
Reference Transcript ID | VIT_02s0025g03280.t01 |
Gene ID | VIT_02s0025g03280 |
Gene Name | NA |
Vv_2:2804071-2804082:+ does not have available information here.
Microexon DNA seq | GTTTATGAAAAG |
Microexon Amino Acid seq | VYEK |
Microexon-tag DNA Seq | GTACGGCCACATTCTTACATCAAGATGGACAACTTCTACACAGTCACGGTTTATGAAAAGGGTGCTGAAGTTGTCAGGATGTACAAAACCTTGCTAGGAAGTCAAGGA |
Microexon-tag Amino Acid seq | VRPHSYIKMDNFYTVTVYEKGAEVVRMYKTLLGSQG |
Transcript ID | Vv.19881.1 |
Gene ID | Vv.19881 |
Gene Name | NA |
Pfam domain motif | Peptidase_M1 |
Motif E-value | 3.4e-50 |
Motif start | 230 |
Motif end | 439 |
Protein seq | >Vv.19881.1 MDMPKEIFLKDYKLPDYYFDTMDLNFLLGEEKTTVYSKITVLPRVEGSPFPLVLDGVDLKLVSVKVNSKELKEEDYVLSP RHLTLPSLPSGEFTLEIVTEICPQKNTSLEGLYKSSGNFCTQCEAEGFRKITFYQDRPDIMAKYTCRIEGDKSLYPVLLS NGNLIEHGDLEGGKHYAIWEDPFKKPCYLFALVAGQLESRDDTFVTRSGRTVSLRIWTPAQDVPRTVHAMYSLKAAMKWD EDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETATDADYAAILGVIGHEYFHNWTGNRVTCRDWFQLS LKEGLTVFRDQEFSSDMGSRTVKRIADVSRLRNYQFPQDAGPMAHPVRPHSYIKMDNFYTVTVYEKGAEVVRMYKTLLGS QGFRKGMDLYFKRHDGQAVTCEDFFAAMRDANDADFANFLLWYSQAGTPLVKVTSSYNAEAHTYSLKFSQEVPPTPGQPV KEPMFIPVAVGFLDSTGKEMPLSSVYHDGTLQSVVSNDQPTYTTVLRVTKKEEEFLFSDISEKPIASLLRGYSAPIRLDT DLTDSDLFFLLAHDSDEFNRWEAGQVLARKLMLGLVADFQQNRPLVLNPKFVHGLKSILLDSSLDKEFIAKAITLPGEGE IMDIMEVADPDAVHAVRSFIRKQLASELRAELLSTVEKNRSSEDYVFNHPNMARRALKNVALGYLALLDDPELTELALHE YRTAANMTEQFAALAAIAQIPGKTRDDVLADFYSKWQQDFLVVNKWFALQAMADIPQNVENVRNLLNHPAFDLRNPNKVY SLIGGFCGSPVNFHAKDGSGYKFLGEMVVQLDKINPQVASRMVSAFSRWKRYDDTRKSLAKAQLEMIVACNGLSENVYEI ASKSLAA* |
CDS seq | >Vv.19881.1 ATGGATATGCCAAAAGAAATCTTCCTGAAGGATTACAAGCTTCCTGATTACTACTTTGATACGATGGATTTGAATTTTTT GTTGGGTGAGGAGAAAACAACTGTCTATTCAAAAATAACTGTCTTACCCAGAGTTGAAGGTTCTCCTTTCCCACTGGTAT TGGATGGGGTAGATCTGAAGCTTGTTTCAGTAAAGGTCAACAGCAAGGAACTTAAGGAAGAAGATTACGTCCTGAGCCCC CGCCATCTGACACTTCCATCACTTCCAAGTGGTGAATTTACTCTGGAAATTGTTACTGAGATATGTCCACAAAAGAACAC ATCATTAGAGGGCCTTTACAAGTCATCTGGGAATTTCTGTACACAATGTGAAGCAGAGGGTTTCCGAAAAATTACATTCT ATCAGGATCGCCCTGATATTATGGCAAAATACACATGCCGCATTGAAGGTGATAAGTCATTATACCCGGTATTGTTGTCT AATGGAAATCTCATAGAGCATGGAGACCTTGAGGGTGGCAAACACTATGCCATTTGGGAGGACCCCTTCAAGAAACCTTG TTACTTATTTGCTTTAGTTGCTGGACAGTTGGAAAGCAGAGATGACACTTTTGTTACCCGTTCAGGCCGAACTGTATCCT TGAGGATCTGGACCCCAGCACAAGATGTACCCAGGACTGTCCATGCCATGTATTCCCTTAAAGCAGCCATGAAATGGGAT GAGGATGTTTTTGGTCTTGAGTATGACCTGGATCTGTTCAATATTGTGGCAGTTCCAGATTTTAACATGGGAGCCATGGA AAACAAAAGTTTGAATATTTTCAATTCCAAGCTTGTCTTGGCATCTCCAGAAACTGCTACGGATGCAGATTATGCAGCAA TTTTGGGAGTTATTGGTCATGAGTATTTCCACAACTGGACTGGTAACAGAGTGACATGTCGTGACTGGTTCCAGCTCAGC TTAAAGGAAGGTCTTACAGTTTTCCGTGATCAGGAATTTTCATCTGACATGGGAAGCCGCACAGTAAAGCGAATTGCTGA TGTTTCAAGGCTTCGAAATTATCAATTTCCACAGGATGCTGGTCCGATGGCACATCCTGTACGGCCACATTCTTACATCA AGATGGACAACTTCTACACAGTCACGGTTTATGAAAAGGGTGCTGAAGTTGTCAGGATGTACAAAACCTTGCTAGGAAGT CAAGGATTCCGAAAAGGCATGGATCTTTATTTTAAGAGGCATGATGGGCAAGCTGTAACCTGTGAAGATTTCTTTGCTGC CATGAGAGATGCAAATGATGCAGATTTTGCTAATTTCTTGTTGTGGTACTCCCAAGCTGGTACGCCTCTCGTGAAGGTTA CTTCTTCCTACAATGCTGAAGCCCATACTTACTCTTTGAAGTTTAGTCAAGAGGTTCCACCAACTCCAGGACAGCCAGTG AAAGAACCAATGTTCATTCCTGTTGCAGTAGGTTTCCTGGACTCAACTGGCAAGGAGATGCCCCTCTCATCTGTGTATCA TGATGGGACTTTGCAGTCTGTTGTGAGCAATGATCAGCCAACTTACACTACAGTTCTTCGAGTAACAAAGAAAGAAGAAG AATTTTTGTTCTCTGATATATCTGAGAAGCCAATTGCATCTCTTTTGCGGGGCTACAGTGCTCCTATTCGTCTGGACACT GATCTCACGGACAGCGATTTGTTTTTCCTTCTTGCTCATGATTCAGATGAGTTCAACCGTTGGGAGGCTGGGCAGGTGTT GGCAAGGAAGCTGATGCTTGGTTTAGTGGCTGATTTCCAACAAAATAGACCATTGGTTCTGAATCCAAAGTTTGTGCATG GGCTCAAAAGCATACTTCTTGACTCAAGCTTGGATAAAGAATTCATTGCAAAGGCAATAACACTGCCGGGTGAAGGGGAG ATCATGGACATTATGGAAGTTGCCGATCCTGATGCAGTGCATGCTGTTCGATCTTTCATCAGGAAGCAGCTGGCGTCTGA ACTGAGAGCAGAGCTCCTTAGCACAGTTGAAAAGAATAGGAGCTCGGAGGATTATGTGTTTAACCATCCTAATATGGCTA GACGTGCACTGAAGAATGTTGCCCTTGGATATCTTGCATTATTGGATGATCCAGAACTCACCGAGCTTGCATTGCACGAA TATAGAACTGCTGCAAATATGACTGAACAGTTTGCAGCTCTGGCTGCCATAGCCCAGATCCCTGGTAAGACCCGTGATGA TGTATTGGCTGACTTCTACAGCAAGTGGCAGCAAGACTTTTTGGTTGTCAATAAATGGTTTGCCCTTCAAGCCATGGCAG ACATTCCTCAGAATGTTGAGAATGTTCGTAACCTCTTAAACCATCCAGCTTTTGACTTACGTAATCCAAACAAGGTATAC TCGCTGATTGGAGGATTCTGTGGATCTCCTGTGAATTTCCACGCAAAGGACGGGTCAGGCTATAAGTTCTTGGGAGAAAT GGTGGTGCAACTGGATAAGATCAACCCTCAGGTGGCCTCTCGCATGGTGTCTGCCTTCTCAAGATGGAAGCGTTATGATG ATACTCGGAAAAGCCTTGCGAAGGCACAGTTGGAGATGATAGTAGCCTGCAATGGACTGTCTGAGAATGTGTATGAAATT GCCTCCAAAAGCTTAGCTGCTTAA |