
Microexon ID | Sb_7:60038388-60038399:+ |
Species | Sorghum Bicolor | Coordinates | 7:60038388..60038399 |
Microexon Cluster ID | MEP28 |
Size | 12 |
Phase | 0 |
Pfam Domain Motif | Peptidase_M1 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 24,19,5,12,48 |
Microexon location in the Microexon-tag | 4 |
Microexon-tag DNA Seq | GTTMGRCCWCAYTCTTAYATYAAGATGGACAACTTCTAYACAGTRACGGTKTATGARAAGGGWGCTGAAGTTGTCMGRATGTACAARACMTTRYTKGGRAGTYMAGGR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTTTACGAGAAG |
Microexon Amino Acid seq | VYEK |
Microexon-tag DNA Seq | ATCCGCCCTCATTCCTATATCAAGATGGACAACTTCTATACTGTGACGGTTTACGAGAAGGGTGCTGAAGTTGTCAGAATGTACAAGACCATGTTTGGAGCGTCAGGG |
Microexon-tag Amino Acid Seq | IRPHSYIKMDNFYTVTVYEKGAEVVRMYKTMFGASG |
Microexon-tag spanning region | 60037972-60038530 |
Microexon-tag prediction score | 0.9703 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | EES14057x |
Reference Transcript ID | EES14057 |
Gene ID | SORBI_3007G165600 |
Gene Name | NA |
Transcript ID | EES14057 |
Protein ID | |
Gene ID | SORBI_3007G165600 |
Gene Name | |
Pfam domain motif | Peptidase_M1 |
Motif E-value | 2.30E-50 |
Motif start | 329 |
Motif end | 540 |
Protein seq | >EES14057 MARRLISPAAACRGCGFVRPGFLAAFSSFHYRTLPSCSPKRTSSVKSCFSNTYNLRKEGSRWIRSEPPLSLNRAKFVGKR TSCSVATEPPPAATEEPNMDAPKEIFLKDYKAPDYYFDTVDLQFQLGEEKTIVTSKIVVSPGVEAGNSAPLFLHGRDLKL LSIKVNGTELKGEEYKVNSRHLTLLTPPAGVFNLEIVTEIYPQLNTSLEGLYKSTGNFCTQCEAEGFRKITFFQDRPDVM AKYTCRIEADKTLYPVLLSNGNLIEQGDLEGGKHYALWEDPFKKPSYLFALVAGQLGCREDSFVTCSGRNVTLRIWTPAQ DLPKTAHAMYSLKAAMKWDEEVFGLEYDLDLFNIVVVPDFNMGAMENKSLNIFQSRLVLASPETATDGDYAAILGVVGHE YFHNWTGNRVTCRDWFQLTLKEGLTVFRDQEFSSDLGCRTVKRIADVSKLRIYQFPQDAGPMAHPIRPHSYIKMDNFYTV TVYEKGAEVVRMYKTMFGASGFRKGMDLYFQRHDGQAVTCEDFYAAMCDANNAQLPNFLQWYSQAGTPIVKVASSYDPSS QTFSLKFSQEVPPTPGQPVKEPMFIPVAVGLVDPTGKDMPLTSVYSDGTLQTLSTDGQPVFTTVLQFKKKEEEFIFKNIP ERPVPSLLRGYSAPVRLDSDLSESDLFFLLANDSDEFNRWEAGQVLARKLMLSLVADFQQQKTLALNPKFVDGIRSILRN TSLDKEFIAKAITLPGQGEIMDMMEVADPDAVHAVRNFIKKELALQLKDDLLAAVKSNRSSEAYTFDHDSMARRALKNTC LAYLASLNEPDFTELALHEYKSATNMTEQFAALAALSQNPGPVRDDALLDFYNKWQDDYLVVSKWFALQATSEIPGNVAN VQKLLSHPAFDMRNPNKVYSLIGGFCGSPVNFHAKDGSGYKFLGEIVLQLDKINPQVASRMVSAFSRWRRYDKTRQDLAK AQLEMIVSANGLSENVYEIASKSLAG* |
CDS seq | >EES14057 ATGGCGCGTCGCCTGATTAGCCCCGCAGCGGCGTGCCGAGGCTGCGGTTTCGTTAGGCCCGGCTTTCTGGCTGCCTTCTC CTCCTTCCATTATCGAACCTTGCCATCGTGCTCACCGAAGAGGACTTCCTCAGTAAAGAGTTGCTTTAGCAACACTTACA ATTTAAGGAAAGAGGGTTCACGTTGGATAAGATCCGAGCCTCCCTTGTCACTAAATAGGGCAAAGTTTGTTGGCAAGAGG ACATCTTGTTCTGTTGCAACAGAGCCGCCTCCTGCTGCCACTGAAGAACCAAACATGGATGCCCCCAAGGAGATATTCTT GAAAGATTACAAGGCCCCTGATTATTATTTTGACACGGTGGATTTGCAATTTCAACTTGGTGAAGAGAAGACCATAGTTA CATCTAAAATAGTTGTATCTCCTGGAGTTGAAGCTGGCAACTCAGCTCCACTATTTCTTCATGGGCGTGACCTCAAGCTG TTATCAATCAAAGTCAATGGCACTGAATTAAAGGGTGAAGAGTATAAAGTCAATTCTCGCCATCTGACACTTTTAACACC ACCTGCTGGCGTATTCAACTTGGAAATAGTTACAGAAATATATCCTCAGCTAAACACATCATTGGAGGGGCTGTACAAGT CTACTGGTAACTTCTGCACTCAGTGTGAAGCAGAAGGGTTTCGGAAGATTACCTTCTTTCAGGATCGCCCGGATGTTATG GCAAAATATACTTGCCGTATTGAAGCTGATAAAACTTTGTATCCAGTATTATTGTCCAATGGGAATCTTATTGAGCAGGG AGACCTTGAGGGTGGAAAGCATTATGCACTGTGGGAGGATCCCTTCAAGAAACCAAGCTACCTGTTTGCTCTAGTTGCTG GTCAGCTGGGATGCCGGGAGGATTCATTTGTTACATGCTCTGGCCGCAACGTAACACTAAGAATTTGGACTCCTGCCCAA GATTTACCAAAAACAGCACATGCTATGTATTCTCTCAAAGCAGCAATGAAGTGGGATGAGGAGGTCTTTGGTCTGGAGTA TGATCTTGATTTATTCAACATTGTTGTTGTTCCCGATTTCAATATGGGAGCAATGGAAAACAAGAGCTTGAATATATTTC AATCTAGACTTGTGTTGGCATCACCAGAGACTGCCACTGATGGTGATTATGCTGCAATTTTGGGTGTTGTTGGACATGAG TATTTCCACAACTGGACTGGGAATAGAGTAACTTGCCGTGATTGGTTCCAGCTAACCCTGAAAGAAGGACTGACCGTTTT CAGGGATCAGGAGTTCTCTTCGGATCTTGGCTGTCGTACGGTAAAACGTATTGCTGATGTCTCCAAACTCAGAATCTATC AATTCCCACAGGATGCTGGGCCTATGGCACATCCTATCCGCCCTCATTCCTATATCAAGATGGACAACTTCTATACTGTG ACGGTTTACGAGAAGGGTGCTGAAGTTGTCAGAATGTACAAGACCATGTTTGGAGCGTCAGGGTTCCGAAAGGGCATGGA TCTTTATTTCCAAAGGCATGATGGGCAAGCTGTCACTTGTGAAGACTTCTATGCAGCCATGTGTGATGCAAATAATGCAC AACTGCCAAACTTTTTACAATGGTACTCTCAAGCAGGTACGCCTATAGTCAAGGTGGCATCTTCATATGATCCTAGTTCT CAGACATTCTCTTTGAAATTTAGCCAAGAAGTACCACCCACTCCTGGCCAACCAGTTAAGGAGCCTATGTTTATACCTGT TGCTGTTGGGCTTGTTGACCCTACTGGAAAAGATATGCCCCTCACTTCCGTTTACAGTGATGGAACTCTCCAAACACTCT CTACTGATGGCCAGCCAGTCTTCACTACTGTGCTGCAGTTTAAAAAGAAGGAAGAAGAGTTTATATTTAAGAACATTCCC GAGAGGCCAGTTCCTTCTTTGTTGAGGGGATATAGTGCTCCTGTCCGTCTAGATTCTGATCTCAGTGAGAGTGACCTATT TTTCTTGCTTGCCAATGACTCAGATGAATTTAACAGATGGGAAGCTGGCCAAGTTTTGGCACGTAAGTTGATGCTCAGTC TTGTAGCTGACTTCCAGCAACAGAAAACACTGGCCCTAAATCCAAAATTTGTTGATGGGATTAGATCAATTCTGCGCAAC ACAAGCTTGGATAAGGAATTCATTGCGAAAGCAATAACTTTGCCTGGTCAAGGGGAGATTATGGATATGATGGAAGTTGC AGATCCTGATGCAGTTCATGCTGTCCGTAACTTTATTAAGAAGGAGCTTGCCTTGCAACTCAAAGATGATCTTCTTGCAG CTGTGAAAAGCAACAGGAGTTCTGAGGCTTACACATTTGACCATGATAGTATGGCTCGCCGTGCATTGAAAAATACATGC CTTGCATACCTTGCATCATTGAATGAGCCAGATTTCACTGAGCTTGCACTGCATGAGTACAAGTCTGCGACTAACATGAC AGAGCAGTTTGCTGCATTAGCAGCATTATCCCAAAATCCAGGCCCAGTTCGTGATGATGCCCTCTTGGATTTCTATAACA AGTGGCAGGATGACTACTTGGTTGTAAGCAAGTGGTTTGCTCTTCAAGCTACTTCAGAGATTCCTGGAAATGTTGCAAAT GTTCAGAAGTTGCTGTCTCACCCTGCTTTCGACATGAGGAATCCCAACAAGGTTTACTCGCTAATCGGTGGATTCTGTGG CTCACCTGTGAACTTCCACGCGAAAGATGGATCTGGGTACAAGTTCTTGGGTGAAATTGTTTTGCAGCTTGACAAGATAA ACCCTCAGGTGGCCTCCCGCATGGTTTCAGCATTTTCTCGGTGGAGGCGATATGACAAGACCAGACAAGATCTTGCCAAG GCCCAGCTGGAGATGATCGTGTCGGCCAATGGACTCTCCGAAAACGTGTACGAGATTGCTTCAAAAAGCTTGGCGGGTTA G |
Sb_7:60038388-60038399:+ does not have available information here.