
Microexon ID | Pp_26:516011-516022:+ |
Species | Physcomitrium patens | Coordinates | 26:516011..516022 |
Microexon Cluster ID | MEP28 |
Size | 12 |
Phase | 0 |
Pfam Domain Motif | Peptidase_M1 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 24,19,5,12,48 |
Microexon location in the Microexon-tag | 4 |
Microexon-tag DNA Seq | GTTMGRCCWCAYTCTTAYATYAAGATGGACAACTTCTAYACAGTRACGGTKTATGARAAGGGWGCTGAAGTTGTCMGRATGTACAARACMTTRYTKGGRAGTYMAGGR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Pp_26:516011-516022:+ does not have available information here.
Transcript ID | Pp3c26_1330V3.1 |
Protein ID | Pp3c26_1330V3.1 |
Gene ID | Pp3c26_1330 |
Gene Name | NA |
Pfam domain motif | Peptidase_M1 |
Motif E-value | 4.7e-49 |
Motif start | 370 |
Motif end | 574 |
Protein seq | >Pp3c26_1330V3.1 MAAPALSVLLERSPASALYASAADSSSRSGAWIAGSAAGGLVLMPVPRLRRSMSMACLRSSARSLLRAAATKNPTFKSAR VQRGIVSRQTLRASPLSRSVRALGSQSYFSNNLLHLRDSVSSRVQCTLAAQPQDTMAKDEVVKEGPKEIFLRDYKAPDYA FEKVDLKFELGEEKTLVTSNIRVLPKSSGAPLILDGDSSLKLVTLKINGSSVPEEDFKITPRKLHLTSLPTGPFELEIVT EIEPQNNTSLEGLYKSSGNFCTQCEAEGFRKITYYQDRPDVMSKFTTRIEADKALYPVLLGNGNLIEEGDLTDGKHYAVW EDPWTKPCYLFALVAGQLVSRDDTFTTMSGRKVVLRIWTPPQDIPKTDHAMKSLINSMKWDEEVFGLEYDLDLFNVVAVP DFNMGAMENKSLNIFNSRLVLASPETATDSDYAAIEGVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDMGS RGVKRISDVSRLRISQFPQDAGPMAHPVRPQSYIKMDNFYTVTVYEKGAEVVRMYQTLLGKEGFRKGMDLYFQRHDGQAV SCEEFMAAMFDANDAKFPTFPLWYAQAGTPILTVTTSYDADAQSFTIKCKQEVPPTAGQPQKEPMLLPLAVGLLDSQGND MRLSSVKDGASLHNLSSSDGDFTTTAVLHVDKAEQEFTFLGITEKPVPSLLRNFSAPVRLVSDVTDDELFFLLAHDSDQF NRWEAGQTLARKLMLDLISKQQKGEELNVNSAFIEGIRSTVTNSSLDKEFVAKCMSLPGESEIADLMEVADPDAIHTVRR FVIKQIAASLREELLSTVEENRSSAAYDPSHEHRARRSLKNISLSYMASLNEPEITELLVNEYKNATNMTDQVSALAALC QNPGDARSQALSDFYDQWKEEALVMNKWLALQAMSDVPGNVEHVRSLLEHPAFDIRNPNKVYSLIGGFCASAVNFHAKDG SGYKFLADIVLELDKLNPQVASRMISAFTRWRRFDEERQALTKAQLERIKSQDGLSDNVFEIASKSLAS* |
CDS seq | >Pp3c26_1330V3.1 ATGGCGGCGCCCGCTTTGTCAGTGCTACTAGAGCGGAGCCCCGCAAGTGCTCTGTATGCTTCCGCTGCAGACTCGAGCTC GCGTTCTGGCGCTTGGATTGCTGGGAGTGCAGCGGGAGGGCTGGTGCTTATGCCGGTGCCGCGGTTGCGACGGAGTATGT CTATGGCATGCTTGCGATCTTCCGCCCGCTCTTTGCTGCGCGCGGCTGCGACTAAGAATCCGACCTTCAAATCAGCTCGG GTCCAGCGTGGTATCGTTTCTAGGCAGACTTTGAGGGCCAGTCCTCTTTCCAGGAGTGTCAGGGCACTTGGCTCACAGTC ATATTTCAGCAACAATCTTCTTCACTTGCGGGATTCGGTGTCTAGTCGTGTTCAGTGTACATTAGCAGCCCAGCCTCAGG ACACCATGGCGAAGGATGAGGTTGTCAAGGAGGGTCCCAAGGAAATCTTTCTTAGGGATTACAAGGCACCAGATTATGCT TTTGAAAAGGTAGATTTGAAATTCGAGTTGGGGGAGGAGAAGACATTAGTTACATCCAACATTCGCGTCCTTCCTAAATC TTCTGGTGCCCCATTGATACTTGACGGTGACTCAAGCTTGAAATTAGTTACTTTGAAAATCAATGGCTCATCCGTACCGG AGGAAGATTTTAAGATCACTCCGCGGAAATTGCACTTGACTTCACTGCCTACTGGTCCCTTTGAGTTGGAAATTGTGACC GAGATCGAGCCACAGAACAACACTTCTTTAGAAGGGCTGTACAAGTCATCTGGGAATTTCTGCACCCAATGTGAAGCAGA GGGTTTCCGCAAGATCACCTACTACCAGGACCGTCCTGATGTTATGTCTAAGTTCACAACACGCATAGAAGCCGATAAAG CCCTTTACCCAGTGTTGTTGGGTAATGGCAACCTGATCGAGGAAGGTGACTTAACAGATGGCAAGCATTATGCAGTGTGG GAGGATCCATGGACCAAACCTTGCTACTTATTTGCACTGGTAGCTGGTCAACTTGTAAGTCGTGATGATACTTTCACCAC TATGTCAGGCCGCAAAGTCGTTCTACGAATTTGGACTCCTCCACAAGATATTCCTAAGACCGACCACGCAATGAAGTCTT TAATCAATTCTATGAAATGGGACGAAGAGGTATTCGGCTTGGAGTATGATCTAGACCTCTTCAACGTTGTTGCTGTGCCA GATTTCAACATGGGTGCTATGGAGAATAAGAGTTTGAACATTTTCAACTCGAGGTTGGTTTTGGCGTCTCCTGAGACAGC CACAGACTCAGACTACGCTGCTATTGAGGGTGTTATTGGCCACGAGTATTTTCACAACTGGACAGGAAATCGGGTGACAT GCAGGGATTGGTTTCAGCTTAGTTTGAAGGAAGGTCTTACTGTATTTAGAGATCAGGAATTCTCATCTGACATGGGTAGC CGTGGAGTAAAGCGTATTTCTGATGTGTCCCGGCTACGAATTTCTCAATTTCCTCAGGATGCTGGTCCGATGGCACATCC TGTGCGACCTCAGTCCTATATAAAGATGGATAACTTCTACACCGTTACTGTTTATGAGAAGGGTGCTGAGGTCGTCCGTA TGTATCAGACTTTGCTTGGAAAGGAAGGCTTTAGAAAGGGTATGGATTTGTACTTCCAAAGGCACGATGGTCAGGCTGTT TCTTGTGAGGAATTTATGGCGGCCATGTTTGATGCCAATGATGCGAAGTTCCCTACGTTCCCTCTTTGGTATGCTCAAGC AGGTACTCCGATTCTGACTGTCACCACCTCTTATGACGCTGATGCGCAATCTTTCACGATCAAGTGCAAGCAAGAAGTTC CCCCCACAGCAGGCCAGCCACAGAAGGAGCCAATGCTTCTACCTCTGGCTGTGGGACTTCTTGACTCACAAGGAAATGAC ATGCGTCTGAGCTCTGTTAAGGATGGCGCTTCACTTCACAATTTGAGCAGTTCGGATGGTGATTTTACCACTACTGCTGT ATTGCATGTTGACAAGGCCGAGCAAGAGTTTACATTTTTGGGCATTACTGAGAAGCCAGTCCCATCATTGTTGCGGAACT TCAGTGCGCCGGTGCGCCTAGTCTCTGATGTTACAGATGACGAGCTATTTTTTCTCCTGGCTCATGATTCTGATCAATTT AACAGGTGGGAAGCTGGTCAGACTCTAGCTCGCAAGCTTATGCTGGACTTGATTTCTAAGCAACAGAAGGGAGAAGAGCT TAACGTTAACAGTGCTTTTATTGAGGGCATCCGCAGTACCGTAACGAACTCCTCCCTCGACAAGGAGTTTGTGGCGAAAT GTATGTCGTTACCTGGAGAAAGTGAGATTGCCGACCTTATGGAGGTGGCTGATCCAGATGCCATACACACTGTTAGACGG TTTGTTATTAAACAAATTGCTGCGAGCCTTCGCGAGGAACTTCTGAGCACGGTGGAAGAAAATCGTAGTTCTGCTGCTTA TGACCCCAGCCACGAGCACAGAGCTCGGCGGTCTTTGAAAAATATTTCATTGAGTTACATGGCATCTTTGAATGAACCTG AGATAACGGAATTGTTAGTGAATGAATATAAGAATGCTACAAACATGACCGATCAAGTTTCTGCTCTAGCTGCACTCTGT CAGAACCCTGGAGATGCTCGCTCTCAGGCTCTATCAGACTTCTACGACCAGTGGAAGGAAGAGGCTTTGGTCATGAACAA ATGGCTAGCTTTGCAAGCTATGTCTGATGTTCCAGGCAATGTTGAGCATGTGCGGAGTCTGCTGGAGCACCCTGCTTTTG ACATCCGTAACCCCAACAAGGTTTATTCTTTGATTGGTGGTTTCTGTGCGTCCGCTGTCAATTTCCACGCCAAGGACGGT TCAGGGTACAAGTTTTTGGCCGACATTGTTCTTGAGCTGGATAAGCTGAATCCTCAGGTTGCATCACGCATGATTTCGGC TTTCACTAGATGGAGGAGGTTTGATGAAGAAAGGCAAGCATTGACCAAAGCACAGTTGGAGCGAATAAAAAGCCAGGACG GTCTATCTGATAATGTTTTTGAGATTGCCTCAAAGAGTCTGGCTTCATAG |
Microexon DNA seq | GTTTATGAGAAG |
Microexon Amino Acid seq | VYEK |
Microexon-tag DNA Seq | GTGCGACCTCAGTCCTATATAAAGATGGATAACTTCTACACCGTTACTGTTTATGAGAAGGGTGCTGAGGTCGTCCGTATGTATCAGACTTTGCTTGGAAAGGAAGGC |
Microexon-tag Amino Acid seq | VRPQSYIKMDNFYTVTVYEKGAEVVRMYQTLLGKEG |
Transcript ID | Pp3c26_1330V3.2 |
Gene ID | Pp.16894 |
Gene Name | NA |
Pfam domain motif | Peptidase_M1 |
Motif E-value | 4.7e-49 |
Motif start | 370 |
Motif end | 574 |
Protein seq | >Pp3c26_1330V3.2 MAAPALSVLLERSPASALYASAADSSSRSGAWIAGSAAGGLVLMPVPRLRRSMSMACLRSSARSLLRAAATKNPTFKSAR VQRGIVSRQTLRASPLSRSVRALGSQSYFSNNLLHLRDSVSSRVQCTLAAQPQDTMAKDEVVKEGPKEIFLRDYKAPDYA FEKVDLKFELGEEKTLVTSNIRVLPKSSGAPLILDGDSSLKLVTLKINGSSVPEEDFKITPRKLHLTSLPTGPFELEIVT EIEPQNNTSLEGLYKSSGNFCTQCEAEGFRKITYYQDRPDVMSKFTTRIEADKALYPVLLGNGNLIEEGDLTDGKHYAVW EDPWTKPCYLFALVAGQLVSRDDTFTTMSGRKVVLRIWTPPQDIPKTDHAMKSLINSMKWDEEVFGLEYDLDLFNVVAVP DFNMGAMENKSLNIFNSRLVLASPETATDSDYAAIEGVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDMGS RGVKRISDVSRLRISQFPQDAGPMAHPVRPQSYIKMDNFYTVTVYEKGAEVVRMYQTLLGKEGFRKGMDLYFQRHDGQAV SCEEFMAAMFDANDAKFPTFPLWYAQAGTPILTVTTSYDADAQSFTIKCKQEVPPTAGQPQKEPMLLPLAVGLLDSQGND MRLSSVKDGASLHNLSSSDGDFTTTAVLHVDKAEQEFTFLGITEKPVPSLLRNFSAPVRLVSDVTDDELFFLLAHDSDQF NRWEAGQTLARKLMLDLISKQQKGEELNVNSAFIEGIRSTVTNSSLDKEFVAKCMSLPGESEIADLMEVADPDAIHTVRR FVIKQIAASLREELLSTVEENRSSAAYDPSHEHRARRSLKNISLSYMASLNEPEITELLVNEYKNATNMTDQVSALAALC QNPGDARSQALSDFYDQWKEEALVMNKWLALQAMSDVPGNVEHVRSLLEHPAFDIRNPNKVYSLIGGFCASAVNFHAKDG SGYKFLADIVLELDKLNPQVASRMISAFTRWRRFDEERQALTKAQLERIKSQDGLSDNVFEIASKSLAS* |
CDS seq | >Pp3c26_1330V3.2 ATGGCGGCGCCCGCTTTGTCAGTGCTACTAGAGCGGAGCCCCGCAAGTGCTCTGTATGCTTCCGCTGCAGACTCGAGCTC GCGTTCTGGCGCTTGGATTGCTGGGAGTGCAGCGGGAGGGCTGGTGCTTATGCCGGTGCCGCGGTTGCGACGGAGTATGT CTATGGCATGCTTGCGATCTTCCGCCCGCTCTTTGCTGCGCGCGGCTGCGACTAAGAATCCGACCTTCAAATCAGCTCGG GTCCAGCGTGGTATCGTTTCTAGGCAGACTTTGAGGGCCAGTCCTCTTTCCAGGAGTGTCAGGGCACTTGGCTCACAGTC ATATTTCAGCAACAATCTTCTTCACTTGCGGGATTCGGTGTCTAGTCGTGTTCAGTGTACATTAGCAGCCCAGCCTCAGG ACACCATGGCGAAGGATGAGGTTGTCAAGGAGGGTCCCAAGGAAATCTTTCTTAGGGATTACAAGGCACCAGATTATGCT TTTGAAAAGGTAGATTTGAAATTCGAGTTGGGGGAGGAGAAGACATTAGTTACATCCAACATTCGCGTCCTTCCTAAATC TTCTGGTGCCCCATTGATACTTGACGGTGACTCAAGCTTGAAATTAGTTACTTTGAAAATCAATGGCTCATCCGTACCGG AGGAAGATTTTAAGATCACTCCGCGGAAATTGCACTTGACTTCACTGCCTACTGGTCCCTTTGAGTTGGAAATTGTGACC GAGATCGAGCCACAGAACAACACTTCTTTAGAAGGGCTGTACAAGTCATCTGGGAATTTCTGCACCCAATGTGAAGCAGA GGGTTTCCGCAAGATCACCTACTACCAGGACCGTCCTGATGTTATGTCTAAGTTCACAACACGCATAGAAGCCGATAAAG CCCTTTACCCAGTGTTGTTGGGTAATGGCAACCTGATCGAGGAAGGTGACTTAACAGATGGCAAGCATTATGCAGTGTGG GAGGATCCATGGACCAAACCTTGCTACTTATTTGCACTGGTAGCTGGTCAACTTGTAAGTCGTGATGATACTTTCACCAC TATGTCAGGCCGCAAAGTCGTTCTACGAATTTGGACTCCTCCACAAGATATTCCTAAGACCGACCACGCAATGAAGTCTT TAATCAATTCTATGAAATGGGACGAAGAGGTATTCGGCTTGGAGTATGATCTAGACCTCTTCAACGTTGTTGCTGTGCCA GATTTCAACATGGGTGCTATGGAGAATAAGAGTTTGAACATTTTCAACTCGAGGTTGGTTTTGGCGTCTCCTGAGACAGC CACAGACTCAGACTACGCTGCTATTGAGGGTGTTATTGGCCACGAGTATTTTCACAACTGGACAGGAAATCGGGTGACAT GCAGGGATTGGTTTCAGCTTAGTTTGAAGGAAGGTCTTACTGTATTTAGAGATCAGGAATTCTCATCTGACATGGGTAGC CGTGGAGTAAAGCGTATTTCTGATGTGTCCCGGCTACGAATTTCTCAATTTCCTCAGGATGCTGGTCCGATGGCACATCC TGTGCGACCTCAGTCCTATATAAAGATGGATAACTTCTACACCGTTACTGTTTATGAGAAGGGTGCTGAGGTCGTCCGTA TGTATCAGACTTTGCTTGGAAAGGAAGGCTTTAGAAAGGGTATGGATTTGTACTTCCAAAGGCACGATGGTCAGGCTGTT TCTTGTGAGGAATTTATGGCGGCCATGTTTGATGCCAATGATGCGAAGTTCCCTACGTTCCCTCTTTGGTATGCTCAAGC AGGTACTCCGATTCTGACTGTCACCACCTCTTATGACGCTGATGCGCAATCTTTCACGATCAAGTGCAAGCAAGAAGTTC CCCCCACAGCAGGCCAGCCACAGAAGGAGCCAATGCTTCTACCTCTGGCTGTGGGACTTCTTGACTCACAAGGAAATGAC ATGCGTCTGAGCTCTGTTAAGGATGGCGCTTCACTTCACAATTTGAGCAGTTCGGATGGTGATTTTACCACTACTGCTGT ATTGCATGTTGACAAGGCCGAGCAAGAGTTTACATTTTTGGGCATTACTGAGAAGCCAGTCCCATCATTGTTGCGGAACT TCAGTGCGCCGGTGCGCCTAGTCTCTGATGTTACAGATGACGAGCTATTTTTTCTCCTGGCTCATGATTCTGATCAATTT AACAGGTGGGAAGCTGGTCAGACTCTAGCTCGCAAGCTTATGCTGGACTTGATTTCTAAGCAACAGAAGGGAGAAGAGCT TAACGTTAACAGTGCTTTTATTGAGGGCATCCGCAGTACCGTAACGAACTCCTCCCTCGACAAGGAGTTTGTGGCGAAAT GTATGTCGTTACCTGGAGAAAGTGAGATTGCCGACCTTATGGAGGTGGCTGATCCAGATGCCATACACACTGTTAGACGG TTTGTTATTAAACAAATTGCTGCGAGCCTTCGCGAGGAACTTCTGAGCACGGTGGAAGAAAATCGTAGTTCTGCTGCTTA TGACCCCAGCCACGAGCACAGAGCTCGGCGGTCTTTGAAAAATATTTCATTGAGTTACATGGCATCTTTGAATGAACCTG AGATAACGGAATTGTTAGTGAATGAATATAAGAATGCTACAAACATGACCGATCAAGTTTCTGCTCTAGCTGCACTCTGT CAGAACCCTGGAGATGCTCGCTCTCAGGCTCTATCAGACTTCTACGACCAGTGGAAGGAAGAGGCTTTGGTCATGAACAA ATGGCTAGCTTTGCAAGCTATGTCTGATGTTCCAGGCAATGTTGAGCATGTGCGGAGTCTGCTGGAGCACCCTGCTTTTG ACATCCGTAACCCCAACAAGGTTTATTCTTTGATTGGTGGTTTCTGTGCGTCCGCTGTCAATTTCCACGCCAAGGACGGT TCAGGGTACAAGTTTTTGGCCGACATTGTTCTTGAGCTGGATAAGCTGAATCCTCAGGTTGCATCACGCATGATTTCGGC TTTCACTAGATGGAGGAGGTTTGATGAAGAAAGGCAAGCATTGACCAAAGCACAGTTGGAGCGAATAAAAAGCCAGGACG GTCTATCTGATAATGTTTTTGAGATTGCCTCAAAGAGTCTGGCTTCATAG |