
Microexon ID | Pp_15:635765-635776:+ |
Species | Physcomitrium patens | Coordinates | 15:635765..635776 |
Microexon Cluster ID | MEP28 |
Size | 12 |
Phase | 0 |
Pfam Domain Motif | Peptidase_M1 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 24,19,5,12,48 |
Microexon location in the Microexon-tag | 4 |
Microexon-tag DNA Seq | GTTMGRCCWCAYTCTTAYATYAAGATGGACAACTTCTAYACAGTRACGGTKTATGARAAGGGWGCTGAAGTTGTCMGRATGTACAARACMTTRYTKGGRAGTYMAGGR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTTTATAGAAAG |
Microexon Amino Acid seq | VYRK |
Microexon-tag DNA Seq | GTACGGCCGCATTCCTACATCAAGATGGATAATTTTTACACGGTCACTGTTTATAGAAAGGGTGCCGAAGTTGTACGTATGTACCAGACTTTGCTAGGGAAGGCTGGT |
Microexon-tag Amino Acid Seq | VRPHSYIKMDNFYTVTVYRKGAEVVRMYQTLLGKAG |
Microexon-tag spanning region | 635383-635941 |
Microexon-tag prediction score | 0.9216 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Pp3c15_1150V3.1x |
Reference Transcript ID | Pp3c15_1150V3.1 |
Gene ID | Pp3c15_1150 |
Gene Name | NA |
Transcript ID | Pp3c15_1150V3.1 |
Protein ID | Pp3c15_1150V3.1 |
Gene ID | Pp3c15_1150 |
Gene Name | NA |
Pfam domain motif | Peptidase_M1 |
Motif E-value | 3.1e-48 |
Motif start | 235 |
Motif end | 439 |
Protein seq | >Pp3c15_1150V3.1 MTKEDAVKETPKEIFLKDYKAPDYAFQKVDLIFVLGEDKTLVTSNIRVIPNFSDGAPLILDGERLKLVTLKINGLHVSKD NYKVSARQLHMTSLPTGSFDLEVVVEIEPQNNTFLEGLYKSTGNFCTQCEAEGFRKITYFQDRPDVMSKFTTRIEADKTL YPVLLSNGNLVDEGDLPDGKHYAVWEDPWTKPCYLFALVAGHLVSRDDSFTTMSGRKVALRIWTPPQDFSKTAHAMKSLK LAMKWDEEVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLILASPETATDVDYAAIEGVIGHEYFHNWTGNRVTCR DWFQLSLKEGLTVFRDQEFSSDMGSRAVKRIADVVRLRTMQYPQDGGPMAHPVRPHSYIKMDNFYTVTVYRKGAEVVRMY QTLLGKAGFRKGMDLYFQRHDGQAVTCEEFLAAMFDANKVKFPTFPLWYAQAGTPTLTVITSYDADAQTFTIKCKQVVPP TPGQSKKEPMLLPLAVGLLDSHGHDMRLTSVKDGASLHHLTSADGDYTTTAVLHVDKTEQEFTFMNITEKPVPSLLRNFS APVRLVSDVTNEDLYFLLAHDSDQFNRWEAGQTLSRKLMLDLISAHQRGEKISVDSAFIKGIRSILLDSSLDKDFAARCL TLPAEGEIADLMDVADPDAVHIVRRFVVREVSACLREDLLNTVKLNRSSIAYDPSHEHRARRALKNVALGYLASLNEPET IDVAVNEYKIASNMTDQLAALNAICQNPGNLRSKSLADFYEQWKEEALVMNKWLALQAMSDIPGNVENVRRLLDHPAFDI RNPNKVYSLIGGFCTSAINFHAKDGSGYTFLADVVLQLDKLNPQVASRMVSSFSRWRRFDEERQALAKAQLERITSQNGL SDNVFEIASKSLAS* |
CDS seq | >Pp3c15_1150V3.1 ATGACGAAGGAGGATGCTGTCAAGGAGACTCCTAAAGAGATTTTTCTTAAGGATTATAAGGCACCAGATTATGCTTTCCA AAAGGTGGATTTGATATTTGTGTTGGGGGAAGATAAGACGCTCGTGACATCCAACATCCGTGTCATTCCAAACTTTTCTG ATGGTGCTCCTTTGATACTCGATGGTGAAAGGTTGAAATTGGTCACTTTGAAAATTAACGGCTTGCATGTCTCGAAAGAT AATTATAAGGTTAGTGCACGGCAACTGCACATGACATCGTTGCCTACTGGTTCTTTCGATTTGGAAGTTGTTGTGGAAAT TGAGCCACAAAATAACACTTTTTTGGAGGGACTGTATAAGTCGACTGGCAATTTCTGCACTCAATGTGAAGCAGAGGGAT TCCGCAAGATCACCTACTTCCAGGATCGTCCAGATGTAATGTCCAAGTTCACTACACGTATAGAAGCTGATAAAACTCTC TATCCAGTGTTGTTGAGCAATGGCAACTTGGTTGATGAGGGTGATTTACCTGATGGTAAGCATTACGCAGTGTGGGAGGA TCCATGGACAAAGCCGTGTTACTTGTTTGCTCTTGTGGCTGGCCATCTTGTGAGTCGGGACGACTCTTTTACCACAATGT CAGGACGCAAAGTGGCTCTTAGAATCTGGACTCCTCCACAAGATTTTTCTAAGACTGCTCACGCAATGAAATCTTTGAAA CTGGCTATGAAGTGGGACGAGGAGGTATTTGGTTTGGAGTATGACCTGGATCTCTTCAACATTGTTGCTGTGCCGGACTT CAACATGGGCGCTATGGAAAATAAGAGTTTAAATATTTTCAATTCAAAGCTGATACTGGCATCCCCTGAAACAGCCACAG ATGTAGACTATGCTGCTATTGAAGGTGTGATTGGCCACGAGTATTTCCACAATTGGACTGGCAACCGAGTGACATGCAGA GATTGGTTTCAGCTTAGTTTGAAAGAAGGTCTCACTGTCTTTAGAGATCAGGAATTTTCTTCTGATATGGGTAGCCGTGC AGTAAAACGCATTGCTGATGTGGTTCGGTTAAGGACAATGCAATATCCTCAGGATGGTGGTCCAATGGCACATCCAGTAC GGCCGCATTCCTACATCAAGATGGATAATTTTTACACGGTCACTGTTTATAGAAAGGGTGCCGAAGTTGTACGTATGTAC CAGACTTTGCTAGGGAAGGCTGGTTTCAGAAAGGGTATGGACTTGTATTTCCAAAGGCACGACGGTCAAGCGGTCACCTG TGAGGAGTTCCTGGCTGCCATGTTCGACGCCAATAAAGTGAAGTTCCCAACATTTCCTCTTTGGTACGCACAGGCGGGTA CTCCAACTCTGACTGTGATCACCTCGTACGACGCTGATGCTCAAACGTTCACCATCAAGTGCAAGCAGGTGGTGCCGCCC ACTCCGGGACAATCAAAGAAGGAGCCGATGCTTCTACCTCTGGCCGTAGGCCTTCTTGACTCACACGGGCACGACATGCG TCTTACGTCTGTGAAAGACGGAGCCTCACTGCACCATTTGACAAGTGCAGATGGTGACTACACCACTACTGCTGTACTAC ATGTTGACAAGACTGAACAAGAATTTACATTTATGAATATCACGGAAAAGCCAGTTCCATCATTGCTGCGTAATTTCAGC GCACCAGTGCGTCTAGTATCTGATGTTACAAATGAAGATCTTTACTTCCTCCTTGCTCATGATTCCGATCAATTTAACAG GTGGGAGGCTGGTCAAACTCTCAGCCGAAAGCTTATGTTGGACCTGATCTCAGCTCATCAGAGAGGAGAGAAGATCAGCG TTGACAGTGCTTTTATTAAAGGCATTCGAAGTATTCTGTTGGATTCGTCTCTTGACAAGGACTTTGCGGCAAGATGTTTG ACTCTACCTGCAGAAGGTGAAATTGCGGACCTCATGGATGTGGCTGACCCAGATGCTGTACACATTGTTAGACGGTTTGT CGTCAGAGAGGTTTCCGCCTGTCTTCGTGAGGACCTACTTAACACGGTCAAACTCAACAGAAGTTCAATTGCATATGACC CTAGTCATGAGCACAGGGCACGGCGTGCTTTGAAGAATGTTGCTTTAGGTTACTTGGCATCTTTGAATGAACCTGAGACC ATAGACGTGGCAGTAAACGAATACAAGATTGCCTCAAATATGACCGATCAATTAGCTGCTCTGAACGCTATTTGCCAGAA TCCTGGGAATTTACGATCCAAGTCCCTGGCAGATTTCTACGAGCAATGGAAGGAAGAGGCCTTGGTCATGAACAAATGGC TAGCTTTGCAAGCTATGTCTGATATCCCAGGAAATGTGGAGAACGTGCGGCGTCTGCTAGACCACCCCGCTTTTGACATT CGGAATCCAAACAAGGTTTATTCCTTGATTGGTGGTTTTTGTACATCTGCCATAAATTTCCACGCCAAAGACGGTTCAGG ATACACGTTTTTGGCTGACGTCGTTCTCCAATTGGATAAACTGAATCCTCAGGTTGCATCCCGCATGGTGTCGTCTTTCT CTAGATGGCGTAGATTTGATGAAGAAAGACAGGCATTAGCCAAAGCACAACTGGAGCGAATTACAAGCCAGAACGGCCTT TCGGACAATGTTTTTGAGATCGCCTCGAAAAGTTTGGCATCTTAG |
Microexon DNA seq | GTTTATAGAAAG |
Microexon Amino Acid seq | VYRK |
Microexon-tag DNA Seq | GTACGGCCGCATTCCTACATCAAGATGGATAATTTTTACACGGTCACTGTTTATAGAAAGGGTGCCGAAGTTGTACGTATGTACCAGACTTTGCTAGGGAAGGCTGGT |
Microexon-tag Amino Acid seq | VRPHSYIKMDNFYTVTVYRKGAEVVRMYQTLLGKAG |
Transcript ID | Pp.6407.1 |
Gene ID | Pp.6407 |
Gene Name | NA |
Pfam domain motif | Peptidase_M1 |
Motif E-value | 3.1e-48 |
Motif start | 235 |
Motif end | 439 |
Protein seq | >Pp.6407.1 MTKEDAVKETPKEIFLKDYKAPDYAFQKVDLIFVLGEDKTLVTSNIRVIPNFSDGAPLILDGERLKLVTLKINGLHVSKD NYKVSARQLHMTSLPTGSFDLEVVVEIEPQNNTFLEGLYKSTGNFCTQCEAEGFRKITYFQDRPDVMSKFTTRIEADKTL YPVLLSNGNLVDEGDLPDGKHYAVWEDPWTKPCYLFALVAGHLVSRDDSFTTMSGRKVALRIWTPPQDFSKTAHAMKSLK LAMKWDEEVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLILASPETATDVDYAAIEGVIGHEYFHNWTGNRVTCR DWFQLSLKEGLTVFRDQEFSSDMGSRAVKRIADVVRLRTMQYPQDGGPMAHPVRPHSYIKMDNFYTVTVYRKGAEVVRMY QTLLGKAGFRKGMDLYFQRHDGQAVTCEEFLAAMFDANKVKFPTFPLWYAQAGTPTLTVITSYDADAQTFTIKCKQVVPP TPGQSKKEPMLLPLAVGLLDSHGHDMRLTSVKDGASLHHLTSADGDYTTTAVLHVDKTEQEFTFMNITEKPVPSLLRNFS APVRLVSDVTNEDLYFLLAHDSDQFNRWEAGQTLSRKLMLDLISAHQRGEKISVDSAFIKGIRSILLDSSLDKDFAARCL TLPAEGEIADLMDVADPDAVHIVRRFVVREVSACLREDLLNTVKLNRSSIAYDPSHEHRARRALKNVALGYLASLNEPET IDVAVNEYKIASNMTDQLAALNAICQNPGNLRSKSLADFYEQWKEEALVMNKWLALQAMSDIPGNVENVRRLLDHPAFDI RNPNKVYSLIGGFCTSAINFHAKDGSGYTFLADVVLQLDKLNPQVASRMVSSFSRWRRFDEERQALAKAQLERITSQNGL SDNVFEIASKSLAS* |
CDS seq | >Pp.6407.1 ATGACGAAGGAGGATGCTGTCAAGGAGACTCCTAAAGAGATTTTTCTTAAGGATTATAAGGCACCAGATTATGCTTTCCA AAAGGTGGATTTGATATTTGTGTTGGGGGAAGATAAGACGCTCGTGACATCCAACATCCGTGTCATTCCAAACTTTTCTG ATGGTGCTCCTTTGATACTCGATGGTGAAAGGTTGAAATTGGTCACTTTGAAAATTAACGGCTTGCATGTCTCGAAAGAT AATTATAAGGTTAGTGCACGGCAACTGCACATGACATCGTTGCCTACTGGTTCTTTCGATTTGGAAGTTGTTGTGGAAAT TGAGCCACAAAATAACACTTTTTTGGAGGGACTGTATAAGTCGACTGGCAATTTCTGCACTCAATGTGAAGCAGAGGGAT TCCGCAAGATCACCTACTTCCAGGATCGTCCAGATGTAATGTCCAAGTTCACTACACGTATAGAAGCTGATAAAACTCTC TATCCAGTGTTGTTGAGCAATGGCAACTTGGTTGATGAGGGTGATTTACCTGATGGTAAGCATTACGCAGTGTGGGAGGA TCCATGGACAAAGCCGTGTTACTTGTTTGCTCTTGTGGCTGGCCATCTTGTGAGTCGGGACGACTCTTTTACCACAATGT CAGGACGCAAAGTGGCTCTTAGAATCTGGACTCCTCCACAAGATTTTTCTAAGACTGCTCACGCAATGAAATCTTTGAAA CTGGCTATGAAGTGGGACGAGGAGGTATTTGGTTTGGAGTATGACCTGGATCTCTTCAACATTGTTGCTGTGCCGGACTT CAACATGGGCGCTATGGAAAATAAGAGTTTAAATATTTTCAATTCAAAGCTGATACTGGCATCCCCTGAAACAGCCACAG ATGTAGACTATGCTGCTATTGAAGGTGTGATTGGCCACGAGTATTTCCACAATTGGACTGGCAACCGAGTGACATGCAGA GATTGGTTTCAGCTTAGTTTGAAAGAAGGTCTCACTGTCTTTAGAGATCAGGAATTTTCTTCTGATATGGGTAGCCGTGC AGTAAAACGCATTGCTGATGTGGTTCGGTTAAGGACAATGCAATATCCTCAGGATGGTGGTCCAATGGCACATCCAGTAC GGCCGCATTCCTACATCAAGATGGATAATTTTTACACGGTCACTGTTTATAGAAAGGGTGCCGAAGTTGTACGTATGTAC CAGACTTTGCTAGGGAAGGCTGGTTTCAGAAAGGGTATGGACTTGTATTTCCAAAGGCACGACGGTCAAGCGGTCACCTG TGAGGAGTTCCTGGCTGCCATGTTCGACGCCAATAAAGTGAAGTTCCCAACATTTCCTCTTTGGTACGCACAGGCGGGTA CTCCAACTCTGACTGTGATCACCTCGTACGACGCTGATGCTCAAACGTTCACCATCAAGTGCAAGCAGGTGGTGCCGCCC ACTCCGGGACAATCAAAGAAGGAGCCGATGCTTCTACCTCTGGCCGTAGGCCTTCTTGACTCACACGGGCACGACATGCG TCTTACGTCTGTGAAAGACGGAGCCTCACTGCACCATTTGACAAGTGCAGATGGTGACTACACCACTACTGCTGTACTAC ATGTTGACAAGACTGAACAAGAATTTACATTTATGAATATCACGGAAAAGCCAGTTCCATCATTGCTGCGTAATTTCAGC GCACCAGTGCGTCTAGTATCTGATGTTACAAATGAAGATCTTTACTTCCTCCTTGCTCATGATTCCGATCAATTTAACAG GTGGGAGGCTGGTCAAACTCTCAGCCGAAAGCTTATGTTGGACCTGATCTCAGCTCATCAGAGAGGAGAGAAGATCAGCG TTGACAGTGCTTTTATTAAAGGCATTCGAAGTATTCTGTTGGATTCGTCTCTTGACAAGGACTTTGCGGCAAGATGTTTG ACTCTACCTGCAGAAGGTGAAATTGCGGACCTCATGGATGTGGCTGACCCAGATGCTGTACACATTGTTAGACGGTTTGT CGTCAGAGAGGTTTCCGCCTGTCTTCGTGAGGACCTACTTAACACGGTCAAACTCAACAGAAGTTCAATTGCATATGACC CTAGTCATGAGCACAGGGCACGGCGTGCTTTGAAGAATGTTGCTTTAGGTTACTTGGCATCTTTGAATGAACCTGAGACC ATAGACGTGGCAGTAAACGAATACAAGATTGCCTCAAATATGACCGATCAATTAGCTGCTCTGAACGCTATTTGCCAGAA TCCTGGGAATTTACGATCCAAGTCCCTGGCAGATTTCTACGAGCAATGGAAGGAAGAGGCCTTGGTCATGAACAAATGGC TAGCTTTGCAAGCTATGTCTGATATCCCAGGAAATGTGGAGAACGTGCGGCGTCTGCTAGACCACCCCGCTTTTGACATT CGGAATCCAAACAAGGTTTATTCCTTGATTGGTGGTTTTTGTACATCTGCCATAAATTTCCACGCCAAAGACGGTTCAGG ATACACGTTTTTGGCTGACGTCGTTCTCCAATTGGATAAACTGAATCCTCAGGTTGCATCCCGCATGGTGTCGTCTTTCT CTAGATGGCGTAGATTTGATGAAGAAAGACAGGCATTAGCCAAAGCACAACTGGAGCGAATTACAAGCCAGAACGGCCTT TCGGACAATGTTTTTGAGATCGCCTCGAAAAGTTTGGCATCTTAG |