
Microexon ID | Hv_7H:31039965-31039976:- |
Species | Hordeum Vulgare | Coordinates | 7H:31039965..31039976 |
Microexon Cluster ID | MEP28 |
Size | 12 |
Phase | 0 |
Pfam Domain Motif | Peptidase_M1 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 24,19,5,12,48 |
Microexon location in the Microexon-tag | 4 |
Microexon-tag DNA Seq | GTTMGRCCWCAYTCTTAYATYAAGATGGACAACTTCTAYACAGTRACGGTKTATGARAAGGGWGCTGAAGTTGTCMGRATGTACAARACMTTRYTKGGRAGTYMAGGR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTTTATGAGAAG |
Microexon Amino Acid seq | VYEK |
Microexon-tag DNA Seq | ATTCGCCCCCTTTCATATATCAAGATGGACAACTTCTATACAGTCACGGTTTATGAGAAGGGTGCTGAAGTCGTCAGGATGTACAAGACAATGTTTGGAGCTTCAGGG |
Microexon-tag Amino Acid Seq | IRPLSYIKMDNFYTVTVYEKGAEVVRMYKTMFGASG |
Microexon-tag spanning region | 31039838-31040387 |
Microexon-tag prediction score | 0.9711 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | HORVU.MOREX.r3.7HG0650600.1x |
Reference Transcript ID | HORVU.MOREX.r3.7HG0650600.1 |
Gene ID | HORVU.MOREX.r3.7HG0650600 |
Gene Name | NA |
Transcript ID | HORVU.MOREX.r3.7HG0650600.1 |
Protein ID | |
Gene ID | HORVU.MOREX.r3.7HG0650600 |
Gene Name | |
Pfam domain motif | Peptidase_M1 |
Motif E-value | 3.50E-50 |
Motif start | 330 |
Motif end | 541 |
Protein seq | >HORVU.MOREX.r3.7HG0650600.1 MARRLLSPAAACQGRGLVKAGFLAAVSPLHYQRLPFSSSKRGSPGNKDSGYRANLTKEGSHWTGTRSNSLLSLHSSKSVS KRTACLTATEPPPAAAEEPEMDLPKEIFLKDYKKPDYLFDTVDLEFQLGDEKTIVTSKIAVSPGNEGTSSPLALNGRDLK LLSIKINGTELKSDKYTVDPRHLTILTPPAGVFNMEIVTEIYPQLNTSLEGLYRSTGNFCTQCEAEGFRKITYFQDRPDV MAKYTCRIEGDKTLYPVLLSNGNLIEQGDLEGGKHYALWEDPFKKPCYLFALVAGQLECREDSFVTCSGRKVTLRIWTPA QDLPKTSHAMYSLKEAMKWDEEVFGLEYDLDLFNIVVVPDFNMGAMENKSLNVFQSRLVLASPEAATDGDYAAILGVIGH EYFHNWTGNRVTCRDWFQLTLKEGLTVFRDQEFSSDLGCRTVKRIADVSKLRSYQFPQDAGPMAHPIRPLSYIKMDNFYT VTVYEKGAEVVRMYKTMFGASGFRKGMDLYFQRHDGQAVTCEDFYAAMCDANNAQLPNFLQWYSQAGTPTVKATSSYDEG SQTFSLKLSQEVPPTPGQPMKEPMFIPVAVGLVDSTGEDMPLTSIYSDGMVQTLSNDGHPVFTTVLQFKKTEEEFIFNNV PERPVPSLLRGYSAPIRLDSDLTESDLYFLLANDSDEFNRWEAGQILARKLMFSLVADFQQQKTLVLNTKFVDGLRAILR STSLDKEFIAKAITLPGQGEIMDMMSIADPDAVHAVRTFIKKELAFQLKDDLLAAVTSNRSSEAYVFNHDSVARRALKNT CLAYLASLNEPDVTELALNEYKSATNMTEQFAALAALSQNPGQVREDALLDFYNKWQQDYLVVSKWFALQATSDIPGNVA NVRKLLAHPAFDMRNPNKVYSLIGGFCGSPVSFHAKDGSGYKFLGEVVLQLDKINPQVASRMVSAFSRWRRYDETRQALA KAQLEMIISANGLSENVYEIASKSLAA* |
CDS seq | >HORVU.MOREX.r3.7HG0650600.1 ATGGCCCGCCGTCTCCTTAGCCCCGCCGCGGCGTGCCAGGGTCGCGGCCTGGTTAAGGCCGGGTTTCTCGCCGCGGTTTC CCCTCTCCATTATCAAAGATTGCCTTTCTCCTCTTCAAAGAGGGGTTCCCCAGGGAACAAGGACTCTGGCTACCGCGCTA ATTTAACAAAGGAGGGTTCACACTGGACAGGAACAAGGTCCAATTCCTTGTTGTCATTACATAGTTCAAAGTCTGTCAGC AAGAGGACAGCTTGTTTGACTGCAACAGAGCCACCTCCTGCTGCAGCTGAAGAACCAGAGATGGACCTTCCGAAGGAGAT ATTCTTGAAAGACTACAAAAAACCCGACTACTTGTTTGACACGGTGGATTTAGAATTTCAACTTGGTGATGAAAAGACCA TAGTCACTTCTAAAATAGCTGTATCTCCAGGCAATGAAGGCACCTCATCTCCACTCGCTCTTAACGGACGTGATCTAAAG CTGTTATCAATCAAAATCAATGGCACAGAGCTGAAGAGTGACAAGTATACAGTTGATCCACGCCATCTGACAATTTTGAC ACCACCTGCTGGTGTATTCAACATGGAAATTGTTACGGAGATTTATCCTCAGCTCAACACATCTTTGGAGGGTCTGTACA GGTCGACTGGTAATTTTTGCACCCAATGTGAAGCAGAAGGATTCAGGAAAATCACCTACTTTCAGGATCGCCCGGACGTC ATGGCAAAATATACTTGTCGTATTGAAGGTGATAAAACTCTGTATCCAGTGTTGTTGTCTAACGGCAATCTTATCGAGCA GGGTGATCTTGAGGGTGGAAAGCACTACGCACTATGGGAGGACCCATTCAAGAAACCATGCTACTTGTTTGCGCTAGTTG CTGGTCAGTTGGAGTGCCGGGAGGACTCATTTGTTACATGTTCTGGCCGCAAAGTTACACTTCGAATTTGGACTCCTGCT CAAGATTTGCCAAAAACATCACATGCTATGTATTCTCTTAAAGAAGCTATGAAATGGGATGAGGAGGTTTTTGGTCTTGA ATATGATCTCGATTTGTTCAACATTGTTGTTGTTCCTGATTTCAATATGGGAGCAATGGAAAACAAGAGCTTGAACGTAT TTCAATCTAGACTTGTGCTAGCATCACCAGAAGCTGCCACTGATGGTGATTATGCTGCAATTTTGGGTGTCATTGGACAT GAGTATTTCCACAACTGGACTGGGAATAGAGTGACTTGTCGTGATTGGTTCCAACTAACGTTGAAAGAAGGACTAACTGT CTTCAGGGATCAGGAATTCTCATCAGATCTTGGCTGTCGCACAGTAAAGCGCATAGCTGATGTCTCTAAACTTAGATCCT ATCAATTCCCTCAGGATGCTGGGCCTATGGCACATCCTATTCGCCCCCTTTCATATATCAAGATGGACAACTTCTATACA GTCACGGTTTATGAGAAGGGTGCTGAAGTCGTCAGGATGTACAAGACAATGTTTGGAGCTTCAGGGTTTCGGAAGGGCAT GGATCTTTACTTCCAAAGGCATGATGGACAAGCCGTGACTTGTGAAGACTTTTACGCAGCCATGTGTGATGCAAATAATG CACAGTTGCCGAACTTTTTACAATGGTACTCTCAAGCAGGTACACCTACTGTTAAGGCAACTTCGTCATATGATGAAGGT TCCCAGACATTCTCTTTGAAATTAAGTCAAGAAGTGCCACCTACCCCTGGCCAACCGATGAAAGAGCCAATGTTCATACC TGTTGCTGTTGGACTTGTTGATTCTACCGGAGAAGATATGCCCCTGACTTCCATCTACAGTGATGGGATGGTCCAAACAC TCTCTAATGATGGTCATCCAGTCTTCACCACAGTTCTTCAGTTTAAGAAGACGGAGGAAGAGTTTATATTTAATAATGTA CCTGAGAGACCGGTTCCTTCCTTGTTGAGGGGATACAGTGCTCCCATCCGTCTTGATTCTGATCTGACTGAGAGTGACTT GTATTTCTTACTTGCCAATGATTCAGATGAATTTAACAGATGGGAAGCAGGTCAAATATTGGCACGCAAATTGATGTTCA GTCTTGTGGCTGACTTCCAACAACAGAAAACATTGGTGCTAAATACAAAATTTGTTGATGGACTTAGAGCAATCCTGCGA AGCACAAGCTTGGATAAAGAATTCATTGCAAAAGCAATAACTCTGCCTGGTCAAGGCGAGATTATGGACATGATGTCAAT TGCAGATCCCGATGCAGTTCATGCTGTCCGGACCTTTATTAAGAAAGAACTTGCCTTTCAACTCAAAGACGATCTTCTTG CTGCTGTAACAAGTAACAGAAGTTCTGAAGCTTATGTATTTAACCATGATAGCGTGGCTCGCCGTGCGTTGAAAAATACA TGTCTCGCTTATCTTGCATCCCTGAATGAGCCAGATGTCACTGAACTTGCATTAAATGAGTACAAGTCTGCTACTAACAT GACCGAGCAGTTTGCTGCATTAGCAGCATTGTCTCAAAATCCAGGTCAAGTCCGTGAGGATGCCCTTTTGGACTTCTATA ACAAATGGCAGCAAGATTATTTGGTTGTAAGCAAGTGGTTTGCTCTTCAAGCTACCTCGGACATTCCTGGAAATGTAGCC AATGTTCGGAAGTTACTGGCTCATCCTGCTTTTGACATGCGGAATCCGAACAAGGTATACTCTTTAATTGGAGGATTTTG TGGGTCACCTGTGAGTTTTCACGCGAAAGATGGTTCTGGTTACAAGTTCTTGGGTGAAGTTGTTTTACAGCTCGACAAAA TAAATCCTCAGGTGGCATCCCGCATGGTGTCAGCATTCTCTCGATGGAGGAGATATGACGAGACGAGACAAGCTCTTGCT AAGGCCCAGTTGGAGATGATTATCTCAGCCAATGGACTCTCTGAAAATGTCTATGAGATAGCCTCGAAAAGTCTGGCAGC TTAG |
Hv_7H:31039965-31039976:- does not have available information here.