| Microexon ID | Bn_scaffoldC04:35785211-35785222:- |
| Species | Brassica Napus | Coordinates | scaffoldC04:35785211..35785222 |
| Microexon Cluster ID | MEP28 |
| Size | 12 |
| Phase | 0 |
| Pfam Domain Motif | Peptidase_M1 |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 24,19,5,12,48 |
| Microexon location in the Microexon-tag | 4 |
| Microexon-tag DNA Seq | GTTMGRCCWCAYTCTTAYATYAAGATGGACAACTTCTAYACAGTRACGGTKTATGARAAGGGWGCTGAAGTTGTCMGRATGTACAARACMTTRYTKGGRAGTYMAGGR |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | GTTTATGAAAAG |
| Microexon Amino Acid seq | VYEK |
| Microexon-tag DNA Seq | GTTCGCCCACATTCATACATCAAGATGGACAACTTTTACACAGTGACGGTTTATGAAAAGGGTGCTGAGGTTGTGAGGATGTACAAAACTCTACTAGGAAGTGAGGGT |
| Microexon-tag Amino Acid Seq | VRPHSYIKMDNFYTVTVYEKGAEVVRMYKTLLGSEG |
| Microexon-tag spanning region | 35785084-35785614 |
| Microexon-tag prediction score | 0.9693 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | BnaC04T0253300ZSx |
| Reference Transcript ID | BnaC04T0253300ZS |
| Gene ID | BnaC04G0253300ZS |
| Gene Name | NA |
| Transcript ID | BnaC04T0253300ZS |
| Protein ID | |
| Gene ID | BnaC04G0253300ZS |
| Gene Name | |
| Pfam domain motif | Peptidase_M1 |
| Motif E-value | 2.80E-53 |
| Motif start | 326 |
| Motif end | 537 |
| Protein seq | >BnaC04T0253300ZS MARLIIPCRSSSSLASRFNLLGLLPRAPPAPVRSGSLSLRNSAKRLTQYTPFLITSQVTCLSKNRFLSHSVDQSSRRLIC SVATETVPDKLEDSNMDAPKEIFLKDYTKPDYYFETVDLSFSLGEEKTIVSSTIKVTPRVKGSSAPLVLDGHDLKLLSVK VEGQLLKEGDYQLDSRHLTLPSLPAEESFVLEIDTEICPQKNTSLDGLYKSSGNFCTQCEAEGFRKITFYQDRPDIMAKY TCRVEADKSLYPVLLSNGNLISQGDIEGGRHFALWEDPFKKPCYLFALVAGQLASRDDTFTTRSGREVSLKIWTPAEDLP KTAHAMYSLKAAMKWDEDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETATDADYAAILGVIGHEYFH NWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDMGSRTVKRIADVSKLRIYQFPQDAGPMAHPVRPHSYIKMDNFYTVTVY EKGAEVVRMYKTLLGSEGFRKGIDLYFERHDEQAVTCEDFFAAMRDANNADFANFLQWYSQAGTPVVKVASSYNAEARTF SLKFSQEIPPTPGQPTKEPTFIPVVVGLLDSSGKDITLSSVYHDGTLQTISSSSTILRVTKKEEEFVFSDISEKTCSVSI * |
| CDS seq | >BnaC04T0253300ZS ATGGCTCGGTTGATAATTCCTTGTCGAAGTTCGTCGTCTCTGGCCTCTAGGTTCAACCTTCTGGGTTTGCTCCCTCGTGC TCCTCCTGCTCCAGTTAGAAGCGGTTCTCTTTCGTTACGTAACTCAGCAAAGAGACTTACTCAATACACACCCTTTCTCA TTACTTCCCAGGTTACGTGTTTGAGCAAGAATCGGTTTCTATCACACTCTGTTGATCAAAGCAGCAGGAGGCTGATTTGT TCTGTTGCCACCGAAACAGTTCCGGATAAACTTGAAGATTCCAATATGGATGCACCTAAGGAAATATTTCTCAAGGACTA CACCAAGCCTGACTACTATTTTGAAACTGTGGACCTAAGCTTCTCTCTTGGTGAAGAGAAAACAATTGTCAGCTCCACAA TCAAGGTTACCCCTCGAGTTAAAGGATCTTCTGCTCCCTTGGTCTTGGATGGGCATGACTTGAAGCTACTTTCTGTCAAG GTGGAAGGGCAGCTTCTAAAGGAAGGGGATTACCAGTTGGATTCTCGTCATCTCACTCTGCCTTCACTGCCGGCCGAGGA GTCCTTTGTTCTGGAAATTGATACTGAGATATGCCCTCAGAAGAATACTTCCCTTGATGGGCTCTACAAGTCATCTGGGA ACTTTTGCACACAATGTGAAGCAGAGGGTTTCCGGAAAATCACCTTTTACCAGGACCGTCCTGATATTATGGCGAAGTAC ACCTGTCGTGTCGAAGCTGACAAGTCACTTTATCCTGTACTGTTGTCCAATGGAAACCTCATTTCTCAAGGAGACATAGA GGGAGGTCGGCACTTTGCCTTATGGGAGGATCCATTCAAGAAGCCATGCTATCTATTTGCTCTGGTGGCTGGACAGCTAG CGAGCAGAGATGATACATTCACCACGCGCTCCGGTAGGGAGGTATCTCTGAAAATCTGGACTCCTGCAGAAGATCTACCA AAGACTGCTCATGCCATGTATTCTCTGAAGGCGGCCATGAAGTGGGATGAGGATGTGTTCGGCCTTGAGTATGACTTGGA TCTCTTCAACATTGTCGCCGTTCCAGATTTTAACATGGGAGCCATGGAAAACAAAAGTTTAAATATTTTTAATTCCAAGC TTGTCCTGGCATCTCCGGAAACGGCAACAGATGCAGATTATGCTGCAATTTTGGGAGTTATTGGTCATGAATACTTCCAC AATTGGACAGGCAACAGGGTGACATGCCGTGACTGGTTCCAACTCAGTCTAAAGGAAGGTCTTACTGTCTTCCGTGACCA GGAGTTTTCATCTGACATGGGAAGCCGTACTGTAAAGCGCATTGCTGATGTTTCAAAGCTCAGGATCTATCAATTCCCGC AGGATGCTGGTCCGATGGCACATCCTGTTCGCCCACATTCATACATCAAGATGGACAACTTTTACACAGTGACGGTTTAT GAAAAGGGTGCTGAGGTTGTGAGGATGTACAAAACTCTACTAGGAAGTGAGGGTTTCCGAAAGGGCATTGATCTCTATTT TGAAAGACATGATGAGCAAGCTGTGACCTGTGAAGACTTCTTTGCTGCAATGCGTGATGCAAACAATGCAGATTTTGCTA ATTTCTTGCAATGGTACTCTCAAGCTGGAACGCCAGTCGTCAAAGTGGCATCCTCTTACAATGCTGAAGCCCGTACCTTC TCTTTGAAATTCAGTCAGGAGATACCCCCAACTCCAGGCCAGCCAACAAAAGAACCAACATTTATTCCAGTGGTTGTTGG TCTTCTGGACTCGAGTGGAAAAGACATTACACTCTCCTCTGTTTATCATGATGGTACACTTCAGACCATTTCAAGCAGCA GCACTATACTTCGAGTGACTAAGAAAGAAGAAGAGTTCGTGTTCTCTGATATATCCGAAAAAACCTGTTCCGTCTCTATT TAG |
Bn_scaffoldC04:35785211-35785222:- does not have available information here.