| Microexon ID | Bn_scaffoldA06:12567147-12567158:- |
| Species | Brassica Napus | Coordinates | scaffoldA06:12567147..12567158 |
| Microexon Cluster ID | MEP28 |
| Size | 12 |
| Phase | 0 |
| Pfam Domain Motif | Peptidase_M1 |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 24,19,5,12,48 |
| Microexon location in the Microexon-tag | 4 |
| Microexon-tag DNA Seq | GTTMGRCCWCAYTCTTAYATYAAGATGGACAACTTCTAYACAGTRACGGTKTATGARAAGGGWGCTGAAGTTGTCMGRATGTACAARACMTTRYTKGGRAGTYMAGGR |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | GTTTATGAAAAG |
| Microexon Amino Acid seq | VYEK |
| Microexon-tag DNA Seq | GTTCGCCCACATTCATACATCAAGATGGACAACTTCTACACAGTGACGGTTTATGAAAAGGGAGCTGAGGTTGTGAGGATGTACAAAACTCTACTCGGAAGTGAGGGT |
| Microexon-tag Amino Acid Seq | VRPHSYIKMDNFYTVTVYEKGAEVVRMYKTLLGSEG |
| Microexon-tag spanning region | 12567021-12567547 |
| Microexon-tag prediction score | 0.9711 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | BnaA06T0189000ZSx |
| Reference Transcript ID | BnaA06T0189000ZS |
| Gene ID | BnaA06G0189000ZS |
| Gene Name | NA |
| Transcript ID | BnaA06T0189000ZS |
| Protein ID | |
| Gene ID | BnaA06G0189000ZS |
| Gene Name | |
| Pfam domain motif | Peptidase_M1 |
| Motif E-value | 1.40E-52 |
| Motif start | 231 |
| Motif end | 442 |
| Protein seq | >BnaA06T0189000ZS MDAPKEIFLKDYTKPDYYFETVDLSFSLGEEKTIVSSLIKVSPRVQGSSAPLVLDGHDLKLLSVKVEGKLLKEGDYQLDS RHLTLPSLPAKESFVLEIDTEIYPHKNTSLDGLYKSSGNFCTQCEAEGFRKITFYQDRPDIMAKYTCRVEADKSLYPVLL SNGNLISQGDIEGGRHFALWEDPFKKPCYLFALVAGQLASRDDTFTTRSGREVSLKIWTPAEDLPKTAHAMYSLKAAMKW DEDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETATDADYAAILGVIGHEYFHNWTGNRVTCRDWFQL SLKEGLTVFRDQEFSSDMGSRTVKRIADVSKLRIYQFPQDAGPMAHPVRPHSYIKMDNFYTVTVYEKGAEVVRMYKTLLG SEGFRKGIDLYFQRHDEQAVTCEDFFAAMRDANSADFANFLQWYSQAGTPVVKVASSYNAEARTFSLKFSQEIPPTPGQP TKEATFIPVVVGLLDSSGKDITLSSVYHDGTLQTISSSSTILRVTKKEEEFVFSDIAERPVPSLFRGFSAPVRVETDLSD DDLFFLLAHDSDEFNRWEAGQVLARKLMLNLVSDFQQNRPLVLNPKFIQGLGSVLSDSTLDKEFIAKAITLPGEGEIMDM MAVADPDAVHAVRKFVRKQLASELKTELLKIVENNRSTEAYVFDHPNMARRALKNTALAYLASLEDPSYVELALSEYKSA TNLTDQFAALAALAQIPGKTRDNVLTDFYNKWQGDYLVVNKWFLLQSSSDIPGNVENVTKLLDHPAFDLRNPNKVYSLIG GFCGSPVNFHAKDGSGYKFLGDIVVQLDKINPQVASRMVSAFSRWKRYDETRQALAKAQLEMIMSANGLSENVFEIASKS LAA* |
| CDS seq | >BnaA06T0189000ZS ATGGATGCACCTAAGGAAATATTTCTCAAGGACTACACCAAGCCTGATTACTACTTTGAAACTGTGGATCTTAGCTTCTC TCTAGGTGAAGAGAAAACAATTGTTAGCTCTTTAATCAAAGTTTCCCCTCGAGTTCAAGGATCCTCTGCTCCCTTGGTCC TGGATGGGCATGACTTGAAGCTACTTTCTGTCAAAGTTGAGGGCAAGCTTCTGAAGGAAGGGGATTACCAGTTGGACTCT CGTCATCTCACTCTGCCTTCACTGCCGGCCAAGGAGTCCTTTGTTCTGGAAATTGATACTGAGATATACCCCCACAAGAA TACTTCACTTGATGGGCTCTACAAGTCATCTGGGAACTTTTGCACACAATGTGAAGCAGAGGGTTTCCGGAAAATCACAT TTTACCAGGACCGTCCTGATATTATGGCGAAGTACACATGCCGTGTTGAAGCTGACAAGTCACTTTATCCTGTATTGTTG TCCAATGGAAACCTTATTTCCCAAGGAGACATAGAGGGAGGTCGGCACTTTGCCTTATGGGAGGACCCATTCAAGAAGCC TTGCTATCTATTTGCTCTGGTGGCTGGACAGCTAGCCAGTAGAGATGATACATTTACCACACGCTCTGGTAGGGAGGTAT CTCTGAAAATCTGGACTCCTGCAGAAGATCTACCGAAGACTGCTCATGCCATGTATTCTCTGAAGGCGGCCATGAAGTGG GATGAAGATGTGTTTGGCCTTGAGTATGACCTGGATCTCTTCAACATTGTCGCCGTTCCAGATTTTAACATGGGAGCCAT GGAAAACAAGAGTTTGAATATTTTTAATTCCAAGCTTGTCCTGGCATCTCCAGAAACTGCAACAGATGCAGATTATGCTG CAATTTTGGGAGTTATTGGTCATGAATACTTCCACAATTGGACAGGTAACAGGGTGACATGCCGTGACTGGTTCCAACTC AGTCTAAAGGAAGGTCTTACTGTCTTCCGTGATCAGGAGTTTTCATCTGACATGGGAAGCCGTACTGTAAAGCGCATTGC TGATGTTTCAAAGCTCAGGATCTATCAATTCCCGCAGGATGCTGGTCCTATGGCACATCCTGTTCGCCCACATTCATACA TCAAGATGGACAACTTCTACACAGTGACGGTTTATGAAAAGGGAGCTGAGGTTGTGAGGATGTACAAAACTCTACTCGGA AGTGAGGGTTTCCGAAAGGGTATTGATCTCTATTTCCAAAGACATGATGAGCAAGCTGTGACCTGTGAAGACTTCTTTGC TGCTATGCGTGATGCCAACAGTGCAGATTTTGCTAATTTTTTGCAATGGTACTCACAAGCTGGAACTCCAGTCGTCAAAG TGGCATCCTCTTACAATGCTGAAGCTCGTACCTTCTCTTTGAAATTCAGTCAGGAGATACCTCCGACTCCGGGCCAGCCC ACAAAAGAAGCTACATTTATTCCAGTGGTTGTTGGTCTTCTGGACTCAAGTGGGAAAGACATTACACTCTCCTCTGTTTA TCATGATGGTACACTGCAGACCATTTCTAGCAGCAGCACAATACTTCGAGTGACTAAGAAAGAAGAAGAGTTTGTGTTCT CTGATATAGCTGAAAGACCTGTTCCATCCCTATTTAGAGGATTCAGTGCGCCAGTTCGTGTTGAGACTGATCTCTCGGAT GATGATCTGTTCTTCCTCCTAGCCCATGATTCAGATGAATTTAACCGGTGGGAGGCAGGTCAAGTTCTTGCAAGGAAGCT CATGCTGAACTTAGTTTCTGATTTCCAACAAAACAGACCATTGGTTTTAAACCCAAAATTCATTCAAGGTCTTGGCAGCG TGCTTTCTGACTCAACCTTGGACAAGGAATTTATTGCCAAGGCAATAACATTGCCTGGGGAGGGAGAGATTATGGACATG ATGGCCGTGGCAGATCCTGATGCTGTTCATGCTGTTAGAAAGTTTGTTAGAAAGCAGCTTGCGTCTGAACTCAAAACTGA GCTTCTAAAGATAGTTGAGAACAATAGGAGCACAGAGGCTTATGTCTTTGACCACCCAAACATGGCGAGGCGTGCTTTGA AGAACACGGCTCTAGCTTATCTTGCATCTCTTGAGGACCCATCATATGTGGAACTTGCATTGAGTGAATACAAGTCGGCC ACCAATTTGACCGACCAATTTGCTGCTTTAGCAGCTCTTGCCCAGATCCCGGGTAAAACCCGTGATAACGTCCTTACTGA CTTCTATAACAAGTGGCAGGGCGATTACTTGGTTGTTAATAAATGGTTCCTCCTTCAATCGTCATCCGACATTCCCGGCA ATGTGGAGAATGTGACGAAGCTTTTGGATCACCCAGCTTTTGATCTGCGCAATCCAAACAAGGTTTACTCGCTTATTGGA GGATTCTGCGGTTCTCCAGTGAACTTCCATGCCAAAGATGGATCAGGTTACAAGTTCTTGGGTGACATTGTTGTCCAGTT AGACAAAATCAATCCTCAGGTTGCTTCTCGTATGGTATCTGCCTTTTCGAGGTGGAAGCGCTACGATGAAACCCGACAAG CTCTGGCCAAGGCACAGTTGGAGATGATAATGTCAGCTAATGGATTATCTGAAAATGTCTTTGAGATTGCCTCTAAGAGT TTGGCTGCTTGA |
Bn_scaffoldA06:12567147-12567158:- does not have available information here.