
Microexon ID | Zm_8:162918531-162918541:- |
Species | Zea mays | Coordinates | 8:162918531..162918541 |
Microexon Cluster ID | MEP27 |
Size | 11 |
Phase | 1 |
Pfam Domain Motif | Gelsolin |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,11,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | MRRGADRYTGWMAGWGATCCYCAYYTGTTYDCWTKYWCWTTYWMTAAAGGRAADYTKRAGGTKRMRGARRTHTACAAYTTYWCYCARGATGAYYTGWTGACWGARGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Zm_8:162918531-162918541:- does not have available information here.
Zm_8:162918531-162918541:- does not have available information here.
Microexon DNA seq | GGAGACTGGAG |
Microexon Amino Acid seq | GRLE |
Microexon-tag DNA Seq | GATATTATTACTAGAGAGCCTCACTTGTATGCATTCTCATTCAAGAACGGGAGACTGGAGGTAACTGAGATCTTCAACTTTTCCCAAGATGATTTGTTAACTGAAGAC |
Microexon-tag Amino Acid seq | DIITREPHLYAFSFKNGRLEVTEIFNFSQDDLLTED |
Transcript ID | Zm.35229.1 |
Gene ID | Zm.35229 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Zm.35229.1 MSTAKVLDPAFQGAGQKVGTEIWRIEDFKPVPLPKSDYGKFYCGDSYIVLQTTCTKGGAYLYDIHFWIGKDSSQDEAGTA AIKTVELDAILGGRAIQHRELQGYESDKFLSYFKPCIIPLEGGFASGFKKPEEEKFETRLYICRGKRAIRVKEVPFARSS LNHDDVFVLDAENKIYQFNGANSNIQERAKALEVIQHLKEKYHGGVCDVAIVDDGKLQAESDSGEFWVLFGGFAPIGKKT VSDDDVVLETTAPRLYSINDGQLKLEETALTKAVLENTKCFLLDCGAEIYVWVGRVTQMEDRKSATKAVEEFLINQKRPK TTRVTQVIQGYESHAFKSKFESWPVGNATGSPGAEEGRGKVAALLKQQGVDLKGAAKSTTPVNEEVPPLLEGGGKLEVWC VDGNAKTALPKEDIGKFYSGDCYIILYTYHSGDKKEEYYLSYWIGKDSLVDDQVSASQITNTVWNSLKGRPVLGRIYQGK EPPQFVALFQPMIILKGGIGSGYKKLIEEKGATGETYTTEGIALIRVSGTSIHNNKTLQVDTVATSLSSMECFILQSGNA MFTWFGNSSTYEQQQWAAKVAEFLKPGVAVKHCKEGTESSGFWFALGGKQSYTNKNAPQDIITREPHLYAFSFKNGRLEV TEIFNFSQDDLLTEDMMILDTHGEVFIWIGQCVESKEKQKAFDIGQKYVEHANSIDDLSPYAPLYKVMEGNEPCFFKTYF SWDNTKSLVHGNSFQKKLSLLFGLRSEGASRSSGNGGPTQRASALAALSSAFNPSSQQRLSNERPKSTGDGPTQRASALA ALSNAFNSSLKPKTPPPSRSGQGSQRAAAVAALSSVLTAEQSGSSENLRAKASSTGDKTDVDRPVITPAGPSGPSSPQSE AGESNVFRQEKDAAVDGAPSDTDGAVAETREEETTENVGEATFSYDRLISKSTDPVRGIDYKRREAYLSDSEFQSVFGMT KDAFYRQPNWKQELQKRKADLF* |
CDS seq | >Zm.35229.1 ATGTCAACTGCAAAAGTGTTAGATCCTGCTTTTCAAGGGGCTGGCCAAAAAGTTGGGACAGAAATATGGCGGATTGAAGA TTTTAAGCCAGTTCCGCTGCCAAAATCTGATTATGGTAAATTCTACTGTGGAGATTCATACATAGTTCTGCAGACGACCT GTACTAAAGGTGGTGCCTATCTATATGATATCCACTTCTGGATTGGGAAAGATTCGAGTCAAGATGAAGCTGGGACTGCA GCAATCAAGACAGTTGAACTTGATGCCATCCTTGGGGGTCGTGCAATCCAACATAGGGAACTCCAAGGTTATGAATCTGA CAAATTCTTGTCATACTTCAAGCCTTGCATTATACCTTTGGAGGGTGGTTTCGCCTCTGGGTTCAAAAAGCCTGAAGAGG AGAAGTTTGAAACACGGTTGTATATTTGCAGAGGGAAGAGAGCTATTCGGGTTAAAGAGGTTCCCTTCGCCCGGTCATCA TTAAACCATGATGATGTGTTTGTCTTAGATGCTGAAAATAAGATATACCAGTTTAATGGTGCTAACTCCAATATCCAAGA AAGGGCCAAAGCGTTGGAAGTAATCCAACATTTAAAGGAGAAGTACCATGGGGGTGTTTGCGATGTTGCGATCGTTGATG ATGGGAAATTACAGGCAGAGTCAGACTCTGGTGAATTCTGGGTCCTTTTTGGAGGTTTTGCACCAATTGGGAAAAAAACC GTGAGTGATGATGATGTTGTACTTGAAACTACAGCACCAAGGCTGTACAGCATCAATGATGGCCAATTGAAGCTGGAAGA AACAGCTCTTACAAAAGCCGTGCTTGAAAATACCAAATGTTTCTTACTTGACTGTGGGGCTGAAATATATGTATGGGTTG GCCGGGTAACACAAATGGAGGATAGAAAATCTGCCACTAAAGCAGTTGAGGAATTTCTTATTAATCAAAAGCGTCCAAAG ACAACGAGGGTAACTCAAGTGATTCAAGGTTATGAGAGTCATGCTTTCAAGTCCAAGTTTGAATCATGGCCAGTGGGTAA TGCTACTGGGAGCCCTGGCGCAGAGGAAGGGCGGGGAAAAGTTGCAGCTTTATTGAAGCAACAAGGTGTTGATCTCAAAG GAGCTGCAAAAAGCACCACTCCAGTAAATGAGGAAGTTCCTCCTTTGCTTGAAGGCGGTGGAAAGCTTGAGGTATGGTGT GTTGATGGCAACGCTAAGACTGCTCTGCCAAAAGAGGATATTGGAAAGTTTTACAGTGGAGACTGTTATATCATTCTCTA TACGTATCATTCGGGCGACAAGAAAGAAGAATACTATCTCAGCTACTGGATTGGGAAGGATAGCTTGGTGGACGATCAAG TGTCGGCATCTCAAATAACTAATACAGTGTGGAATTCATTGAAAGGACGGCCAGTTCTGGGTCGTATATACCAAGGGAAG GAGCCACCACAGTTTGTTGCACTTTTCCAGCCCATGATTATCTTGAAGGGTGGAATTGGATCTGGATACAAGAAGCTCAT AGAAGAAAAGGGTGCGACGGGTGAGACTTATACTACTGAAGGCATAGCTCTAATTCGAGTATCTGGGACATCTATCCACA ACAACAAGACTCTTCAAGTCGATACGGTGGCAACATCTTTAAGCTCAATGGAGTGTTTCATACTGCAATCTGGAAATGCT ATGTTTACATGGTTTGGCAATTCTAGCACATATGAGCAACAGCAGTGGGCAGCAAAAGTTGCTGAATTTTTGAAGCCTGG CGTTGCAGTGAAGCACTGCAAGGAGGGGACAGAGAGTTCAGGTTTCTGGTTTGCTCTTGGAGGAAAACAGAGTTATACAA ATAAAAATGCTCCTCAGGATATTATTACTAGAGAGCCTCACTTGTATGCATTCTCATTCAAGAACGGGAGACTGGAGGTA ACTGAGATCTTCAACTTTTCCCAAGATGATTTGTTAACTGAAGACATGATGATACTTGACACACATGGTGAGGTTTTCAT TTGGATTGGTCAGTGCGTGGAATCAAAAGAGAAACAGAAGGCATTTGATATTGGCCAGAAATACGTGGAGCATGCAAATT CTATTGATGATCTTTCTCCATATGCACCACTATATAAAGTTATGGAAGGGAATGAGCCATGCTTCTTCAAGACATATTTC TCTTGGGATAACACAAAATCTTTGGTTCATGGAAATTCCTTCCAGAAGAAACTCTCACTGCTTTTTGGATTGCGTTCTGA GGGTGCATCTAGGAGCTCTGGTAATGGTGGACCAACTCAAAGGGCATCTGCATTAGCAGCTCTATCATCTGCATTCAATC CATCGTCTCAACAAAGGCTCTCTAATGAGAGGCCTAAAAGCACAGGCGATGGACCCACTCAACGCGCCTCAGCACTGGCT GCCCTATCTAATGCATTCAATTCATCCTTAAAACCCAAAACACCACCTCCATCTCGCTCAGGTCAAGGTTCCCAAAGAGC AGCTGCCGTAGCTGCACTATCCTCTGTGCTGACTGCTGAGCAATCTGGATCTTCAGAAAATCTACGAGCCAAAGCTAGCA GCACAGGAGATAAGACTGATGTCGATAGGCCTGTCATAACTCCAGCTGGACCATCTGGTCCATCTTCTCCTCAGTCTGAA GCTGGGGAGTCCAATGTGTTTCGCCAGGAAAAAGATGCTGCAGTAGATGGGGCACCATCTGACACTGATGGAGCAGTGGC TGAGACCCGAGAGGAAGAAACGACAGAGAATGTTGGTGAAGCGACATTTAGCTATGACCGCTTGATATCTAAATCTACCG ATCCAGTCCGTGGGATAGATTACAAACGCAGAGAGGCATACTTATCTGATAGTGAGTTCCAAAGTGTTTTTGGCATGACC AAGGATGCATTCTACCGACAGCCAAATTGGAAGCAAGAACTACAGAAGCGAAAAGCAGATCTCTTCTAA |