Microexon ID Zm_7:160048596-160048606:+
Species Zea mays
Coordinates 7:160048596..160048606
Microexon Cluster ID MEP27
Size 11
Phase 1
Pfam Domain Motif Gelsolin
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,11,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq MRRGADRYTGWMAGWGATCCYCAYYTGTTYDCWTKYWCWTTYWMTAAAGGRAADYTKRAGGTKRMRGARRTHTACAAYTTYWCYCARGATGAYYTGWTGACWGARGAT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GCAATTTGAAG
Microexon Amino Acid seq GNLK
Microexon-tag DNA Seq CAAGAACTTGAAAGTGATCCCCATCTTTTCTCATGCATCCTGTCGAAAGGCAATTTGAAGGTCAAAGAAATGCACCACTTTACTCAAGATGATTTAATGACAGAAGAT
Microexon-tag Amino Acid Seq QELESDPHLFSCILSKGNLKVKEMHHFTQDDLMTED
Microexon-tag spanning region160048421-160048743
Microexon-tag prediction score0.949
Overlapped with the annotated transcript (%) 100
New Transcript ID Zm00001d021685_T001x
Reference Transcript ID Zm00001d021685_T001
Gene ID Zm00001d021685
Gene Name NA
Transcript ID Zm00001d021685_T001
Protein ID NA
Gene ID Zm00001d021685
Gene Name NA
Pfam domain motif NA
Motif E-value NA
Motif start NA
Motif end NA
Protein seq
CDS seq
Microexon DNA seq GCAATTTGAAG
Microexon Amino Acid seq GNLK
Microexon-tag DNA Seq CAAGAACTTGAAAGTGATCCCCATCTTTTCTCATGCATCCTGTCGAAAGGCAATTTGAAGGTCAAAGAAATGCACCACTTTACTCAAGATGATTTAATGACAGAAGAT
Microexon-tag Amino Acid seq QELESDPHLFSCILSKGNLKVKEMHHFTQDDLMTED
Transcript ID Zm00001d021685_T028
Gene ID Zm00001d021685
Gene Name NA
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >Zm00001d021685_T028
MVQELESDPHLFSCILSKGNLKVKEMHHFTQDDLMTEDVFVLDCHTSIFVWVGQQVDVKLRLQALDVGEKFIVLDFLMEN
LARETPIFTIMEGSEPLFFTRFFTWDLAKSLMHGNSYQRKLAIVKGGGAPALDKPKRRTSIYSGRSTAQDKSQRPRSMSF
SPERVRVRGRSPAFTALAATFESSSNRNLSTPPVVKKLYPRSVTPDSSNTSKSSVIAALAGSLDRPSQTPAPAFMKDGSE
SEKPKQEGDGKGVHTVATSVESLTINEDVKENEPEDEDGLPIYLYERLKTTAVDPVTEIDVTRRETYLSSTEFREKFGMT
KEAFSKLPKWKRNKLKIALQLF*
CDS seq >Zm00001d021685_T028
ATGGTGCAAGAACTTGAAAGTGATCCCCATCTTTTCTCATGCATCCTGTCGAAAGGCAATTTGAAGGTCAAAGAAATGCA
CCACTTTACTCAAGATGATTTAATGACAGAAGATGTTTTTGTTCTGGACTGTCACACGAGCATATTCGTTTGGGTTGGTC
AGCAGGTGGATGTTAAACTCAGGTTACAAGCTCTGGATGTTGGGGAGAAATTTATTGTGCTTGATTTCCTTATGGAAAAC
CTTGCCCGTGAAACACCAATTTTCACCATTATGGAGGGAAGCGAGCCTCTCTTCTTCACTAGATTCTTCACCTGGGACTT
GGCAAAATCACTGATGCATGGAAATTCATACCAGAGGAAACTCGCAATTGTAAAAGGTGGAGGTGCTCCAGCGTTGGATA
AACCGAAACGACGAACATCCATCTATTCAGGAAGGAGTACTGCACAAGATAAATCCCAACGCCCCAGAAGCATGTCCTTC
AGCCCTGAGCGTGTCCGTGTTAGGGGAAGATCTCCAGCATTCACTGCATTGGCAGCTACTTTTGAAAGTTCAAGCAACAG
AAATCTTTCGACTCCACCTGTAGTTAAGAAACTTTACCCGAGATCTGTTACACCTGATTCATCGAATACTTCCAAGTCAT
CTGTAATTGCCGCTCTGGCTGGTTCTTTGGATCGCCCTTCTCAAACTCCTGCTCCAGCATTCATGAAAGATGGTTCTGAG
TCAGAGAAGCCAAAACAGGAGGGAGATGGTAAAGGTGTTCATACTGTGGCCACTAGTGTTGAATCTCTGACTATAAATGA
AGATGTAAAAGAAAACGAGCCAGAAGATGAAGACGGCCTTCCTATTTACCTGTATGAACGTCTGAAGACCACAGCTGTTG
ATCCTGTCACTGAAATTGATGTCACGAGGCGAGAGACCTACTTATCTTCGACTGAATTCAGAGAGAAGTTTGGGATGACA
AAGGAAGCATTTAGCAAGCTTCCGAAGTGGAAGCGGAACAAGCTAAAAATTGCTCTTCAACTTTTTTAG