
Microexon ID | Zm_6:127273295-127273305:+ |
Species | Zea mays | Coordinates | 6:127273295..127273305 |
Microexon Cluster ID | MEP27 |
Size | 11 |
Phase | 1 |
Pfam Domain Motif | Gelsolin |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,11,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | MRRGADRYTGWMAGWGATCCYCAYYTGTTYDCWTKYWCWTTYWMTAAAGGRAADYTKRAGGTKRMRGARRTHTACAAYTTYWCYCARGATGAYYTGWTGACWGARGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Zm_6:127273295-127273305:+ does not have available information here.
Transcript ID | Zm00001d037497_T001 |
Protein ID | Zm00001d037497_P001 |
Gene ID | Zm00001d037497 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Zm00001d037497_P001 MKGVDDGFLGAGDKPGLDIWCIFGSSVVPVAKSQHGKFYTGSTYIILNTTQLKSGVRRHDVHYWVGEEAKEEDCFMASDK AVELDAALGSSTVQYRETQGEESDKFLSYFKPCVIPIQGRFFSHLKGSGDRSSATTMFRCQGEHVARVTQVPFSRSSLDH KSVFIVDTPSKLFLFSGCNSRMQTRAKALDVVKHLKENRHLGRCEIATIEDGKLVGDSDAGEFWNLFGGYAPIPRDLPDA IKEEPLTAPSKKLFWINKKNLVPLEAHPLDREMLNSDRSYMLDCSTEIFLWMGMTTLVSERKSSVAVLEDYVHSQGRSFN VHTFIMTEGHETVDFKLHFQHWSRNVELKLYEAGREKVAAIFKHQGYDVTEIPEDKPQQFINCNGSLKVWLVDHGCTNLL STEDQEKLYTGDCYIIRYSYFENGKNYHLFFAWSGKNSVKDDRMAATSLMSSMVDSVKGHPVVAQVFEGGEPELFLSVFK SLIIFKGGRSAAYKSSVLQKSPRNGCHESEGVALFRVQGLKHYCVQAIQVDLVASSLNSSHCYILQDNGLFLTWLGGLSS PSDHNILDMIMSKLCPMEQSLLVREGSEPDHFWKALGGRSEYSKEKRVKGWPADPHLYACRFEQGLLKVKEVFSFCKDDL ATEETLILDCNEEIYVWVGLHSDITSKEQALNVGKMFLKDAVHGGRSMETTVYAVTEGDEPGFFTSFFDWDNSKQSYMVG NSFERKLAVLKGVSPKLETPDRSLRRPSRRPGVSSEPTTPEHQQPTARRAFGSTSAGRFARERSPAVAPPTLSPSPKSRS SSSTPTTVARRLFPASVHASEAVHVVSTATARRR* |
CDS seq | >Zm00001d037497_T001 ATGAAGGGCGTCGACGATGGGTTCCTCGGCGCTGGCGACAAGCCAGGGCTGGATATTTGGTGCATCTTTGGGAGCAGTGT GGTCCCAGTTGCAAAATCTCAGCACGGAAAGTTCTACACCGGCAGCACCTACATCATACTAAACACAACTCAGCTGAAAT CCGGGGTTCGCAGACACGATGTGCATTACTGGGTTGGGGAGGAGGCTAAAGAGGAAGATTGTTTCATGGCCTCGGACAAG GCTGTTGAGTTGGACGCAGCACTGGGCTCCAGCACGGTCCAGTACAGGGAAACACAGGGTGAAGAATCTGACAAGTTCTT GTCATACTTCAAACCGTGTGTCATCCCAATACAAGGCCGCTTCTTTTCACACCTGAAAGGATCTGGTGATAGATCCAGCG CGACCACGATGTTTAGGTGCCAAGGAGAGCACGTTGCTCGTGTCACACAAGTTCCGTTTTCACGGTCCTCTCTGGATCAC AAATCGGTTTTTATAGTGGACACGCCGTCAAAGCTTTTCCTTTTCAGTGGCTGTAATTCTCGTATGCAAACAAGGGCTAA AGCGTTGGATGTTGTTAAGCATCTGAAGGAGAATCGACACTTGGGAAGATGTGAGATCGCGACAATAGAGGATGGAAAGC TTGTTGGTGATTCTGATGCTGGAGAGTTCTGGAACTTGTTTGGAGGCTATGCGCCTATTCCTCGTGATCTACCTGACGCA ATCAAGGAAGAGCCACTAACTGCACCATCTAAGAAACTTTTTTGGATCAATAAGAAAAACCTTGTTCCACTCGAGGCACA CCCGTTGGATAGAGAAATGCTGAACTCAGACAGAAGTTACATGCTGGACTGCAGCACTGAAATATTCTTATGGATGGGGA TGACAACACTGGTTTCAGAGAGGAAGTCATCTGTTGCTGTCTTGGAAGATTATGTGCACTCCCAAGGCAGGTCATTCAAC GTTCACACATTTATAATGACAGAAGGCCATGAAACTGTTGACTTTAAGCTGCACTTTCAACACTGGTCCAGGAATGTTGA GCTAAAGTTATATGAGGCTGGCCGAGAGAAAGTGGCAGCTATTTTCAAGCATCAGGGCTATGATGTCACAGAAATTCCTG AGGATAAACCTCAGCAGTTCATCAATTGTAATGGCAGTCTGAAGGTTTGGTTGGTGGACCATGGTTGTACAAACCTTCTT AGTACTGAGGACCAGGAAAAATTGTACACTGGAGACTGTTATATCATACGGTATAGCTATTTTGAAAATGGAAAAAATTA CCATCTGTTCTTTGCATGGTCTGGTAAGAATAGTGTAAAGGATGATAGAATGGCGGCAACATCGTTAATGTCTAGCATGG TTGATTCAGTCAAAGGGCATCCAGTTGTGGCACAAGTTTTTGAGGGCGGAGAACCAGAATTATTTCTCTCGGTGTTCAAG TCACTAATCATATTCAAGGGGGGCAGGAGTGCTGCATATAAGAGTTCTGTTCTACAGAAAAGTCCGAGAAATGGATGTCA TGAGAGTGAAGGAGTCGCCCTATTCCGTGTTCAAGGGCTTAAACATTATTGTGTGCAGGCCATTCAAGTTGATCTGGTTG CAAGTTCACTTAATTCCTCGCACTGTTATATTTTGCAAGACAACGGTTTGTTCCTTACTTGGTTAGGAGGCCTGTCTTCA CCAAGCGATCATAATATACTTGACATGATCATGAGCAAGTTGTGTCCAATGGAACAGTCCTTGCTAGTCAGAGAAGGCTC TGAACCAGATCACTTCTGGAAAGCTTTGGGAGGACGATCGGAGTACTCGAAAGAAAAGCGTGTGAAAGGTTGGCCTGCAG ATCCACATCTGTATGCTTGTAGATTTGAACAAGGTTTACTCAAGGTCAAGGAGGTATTCAGCTTCTGTAAGGATGACCTG GCAACTGAAGAGACGTTGATTCTGGACTGCAATGAAGAAATCTACGTCTGGGTTGGCCTACACTCAGATATTACATCCAA GGAGCAAGCTCTCAATGTTGGCAAGATGTTCCTTAAGGATGCTGTTCACGGTGGAAGGTCAATGGAAACGACAGTGTATG CTGTCACAGAAGGGGACGAGCCTGGATTTTTCACCAGCTTCTTCGACTGGGACAATTCGAAGCAATCATATATGGTTGGC AACTCATTTGAGAGGAAGCTCGCCGTCCTGAAAGGGGTCTCCCCAAAACTAGAGACACCGGACAGAAGCCTGCGCAGGCC GTCTAGGAGGCCCGGGGTATCGTCGGAGCCGACCACGCCGGAGCACCAGCAACCGACCGCGAGAAGGGCCTTCGGCTCCA CGTCTGCCGGGCGGTTTGCCAGGGAGCGCTCTCCGGCTGTTGCACCGCCAACGTTGTCGCCATCTCCCAAAAGCCGCTCG TCGTCGTCGACGCCCACCACGGTGGCACGACGGCTCTTTCCTGCCTCGGTGCACGCATCGGAGGCTGTGCACGTGGTCTC CACGGCGACAGCTCGACGACGGTGA |
Microexon DNA seq | GTTTACTCAAG |
Microexon Amino Acid seq | GLLK |
Microexon-tag DNA Seq | AAAGGTTGGCCTGCAGATCCACATCTGTATGCTTGTAGATTTGAACAAGGTTTACTCAAGGTCAAGGAGGTATTCAGCTTCTGTAAGGATGACCTGGCAACTGAAGAG |
Microexon-tag Amino Acid seq | KGWPADPHLYACRFEQGLLKVKEVFSFCKDDLATEE |
Transcript ID | Zm00001d037497_T001 |
Gene ID | Zm.27950 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Zm00001d037497_T001 MKGVDDGFLGAGDKPGLDIWCIFGSSVVPVAKSQHGKFYTGSTYIILNTTQLKSGVRRHDVHYWVGEEAKEEDCFMASDK AVELDAALGSSTVQYRETQGEESDKFLSYFKPCVIPIQGRFFSHLKGSGDRSSATTMFRCQGEHVARVTQVPFSRSSLDH KSVFIVDTPSKLFLFSGCNSRMQTRAKALDVVKHLKENRHLGRCEIATIEDGKLVGDSDAGEFWNLFGGYAPIPRDLPDA IKEEPLTAPSKKLFWINKKNLVPLEAHPLDREMLNSDRSYMLDCSTEIFLWMGMTTLVSERKSSVAVLEDYVHSQGRSFN VHTFIMTEGHETVDFKLHFQHWSRNVELKLYEAGREKVAAIFKHQGYDVTEIPEDKPQQFINCNGSLKVWLVDHGCTNLL STEDQEKLYTGDCYIIRYSYFENGKNYHLFFAWSGKNSVKDDRMAATSLMSSMVDSVKGHPVVAQVFEGGEPELFLSVFK SLIIFKGGRSAAYKSSVLQKSPRNGCHESEGVALFRVQGLKHYCVQAIQVDLVASSLNSSHCYILQDNGLFLTWLGGLSS PSDHNILDMIMSKLCPMEQSLLVREGSEPDHFWKALGGRSEYSKEKRVKGWPADPHLYACRFEQGLLKVKEVFSFCKDDL ATEETLILDCNEEIYVWVGLHSDITSKEQALNVGKMFLKDAVHGGRSMETTVYAVTEGDEPGFFTSFFDWDNSKQSYMVG NSFERKLAVLKGVSPKLETPDRSLRRPSRRPGVSSEPTTPEHQQPTARRAFGSTSAGRFARERSPAVAPPTLSPSPKSRS SSSTPTTVARRLFPASVHASEAVHVVSTATARRR* |
CDS seq | >Zm00001d037497_T001 ATGAAGGGCGTCGACGATGGGTTCCTCGGCGCTGGCGACAAGCCAGGGCTGGATATTTGGTGCATCTTTGGGAGCAGTGT GGTCCCAGTTGCAAAATCTCAGCACGGAAAGTTCTACACCGGCAGCACCTACATCATACTAAACACAACTCAGCTGAAAT CCGGGGTTCGCAGACACGATGTGCATTACTGGGTTGGGGAGGAGGCTAAAGAGGAAGATTGTTTCATGGCCTCGGACAAG GCTGTTGAGTTGGACGCAGCACTGGGCTCCAGCACGGTCCAGTACAGGGAAACACAGGGTGAAGAATCTGACAAGTTCTT GTCATACTTCAAACCGTGTGTCATCCCAATACAAGGCCGCTTCTTTTCACACCTGAAAGGATCTGGTGATAGATCCAGCG CGACCACGATGTTTAGGTGCCAAGGAGAGCACGTTGCTCGTGTCACACAAGTTCCGTTTTCACGGTCCTCTCTGGATCAC AAATCGGTTTTTATAGTGGACACGCCGTCAAAGCTTTTCCTTTTCAGTGGCTGTAATTCTCGTATGCAAACAAGGGCTAA AGCGTTGGATGTTGTTAAGCATCTGAAGGAGAATCGACACTTGGGAAGATGTGAGATCGCGACAATAGAGGATGGAAAGC TTGTTGGTGATTCTGATGCTGGAGAGTTCTGGAACTTGTTTGGAGGCTATGCGCCTATTCCTCGTGATCTACCTGACGCA ATCAAGGAAGAGCCACTAACTGCACCATCTAAGAAACTTTTTTGGATCAATAAGAAAAACCTTGTTCCACTCGAGGCACA CCCGTTGGATAGAGAAATGCTGAACTCAGACAGAAGTTACATGCTGGACTGCAGCACTGAAATATTCTTATGGATGGGGA TGACAACACTGGTTTCAGAGAGGAAGTCATCTGTTGCTGTCTTGGAAGATTATGTGCACTCCCAAGGCAGGTCATTCAAC GTTCACACATTTATAATGACAGAAGGCCATGAAACTGTTGACTTTAAGCTGCACTTTCAACACTGGTCCAGGAATGTTGA GCTAAAGTTATATGAGGCTGGCCGAGAGAAAGTGGCAGCTATTTTCAAGCATCAGGGCTATGATGTCACAGAAATTCCTG AGGATAAACCTCAGCAGTTCATCAATTGTAATGGCAGTCTGAAGGTTTGGTTGGTGGACCATGGTTGTACAAACCTTCTT AGTACTGAGGACCAGGAAAAATTGTACACTGGAGACTGTTATATCATACGGTATAGCTATTTTGAAAATGGAAAAAATTA CCATCTGTTCTTTGCATGGTCTGGTAAGAATAGTGTAAAGGATGATAGAATGGCGGCAACATCGTTAATGTCTAGCATGG TTGATTCAGTCAAAGGGCATCCAGTTGTGGCACAAGTTTTTGAGGGCGGAGAACCAGAATTATTTCTCTCGGTGTTCAAG TCACTAATCATATTCAAGGGGGGCAGGAGTGCTGCATATAAGAGTTCTGTTCTACAGAAAAGTCCGAGAAATGGATGTCA TGAGAGTGAAGGAGTCGCCCTATTCCGTGTTCAAGGGCTTAAACATTATTGTGTGCAGGCCATTCAAGTTGATCTGGTTG CAAGTTCACTTAATTCCTCGCACTGTTATATTTTGCAAGACAACGGTTTGTTCCTTACTTGGTTAGGAGGCCTGTCTTCA CCAAGCGATCATAATATACTTGACATGATCATGAGCAAGTTGTGTCCAATGGAACAGTCCTTGCTAGTCAGAGAAGGCTC TGAACCAGATCACTTCTGGAAAGCTTTGGGAGGACGATCGGAGTACTCGAAAGAAAAGCGTGTGAAAGGTTGGCCTGCAG ATCCACATCTGTATGCTTGTAGATTTGAACAAGGTTTACTCAAGGTCAAGGAGGTATTCAGCTTCTGTAAGGATGACCTG GCAACTGAAGAGACGTTGATTCTGGACTGCAATGAAGAAATCTACGTCTGGGTTGGCCTACACTCAGATATTACATCCAA GGAGCAAGCTCTCAATGTTGGCAAGATGTTCCTTAAGGATGCTGTTCACGGTGGAAGGTCAATGGAAACGACAGTGTATG CTGTCACAGAAGGGGACGAGCCTGGATTTTTCACCAGCTTCTTCGACTGGGACAATTCGAAGCAATCATATATGGTTGGC AACTCATTTGAGAGGAAGCTCGCCGTCCTGAAAGGGGTCTCCCCAAAACTAGAGACACCGGACAGAAGCCTGCGCAGGCC GTCTAGGAGGCCCGGGGTATCGTCGGAGCCGACCACGCCGGAGCACCAGCAACCGACCGCGAGAAGGGCCTTCGGCTCCA CGTCTGCCGGGCGGTTTGCCAGGGAGCGCTCTCCGGCTGTTGCACCGCCAACGTTGTCGCCATCTCCCAAAAGCCGCTCG TCGTCGTCGACGCCCACCACGGTGGCACGACGGCTCTTTCCTGCCTCGGTGCACGCATCGGAGGCTGTGCACGTGGTCTC CACGGCGACAGCTCGACGACGGTGA |