
Microexon ID | Zm_3:150161992-150162002:- |
Species | Zea mays | Coordinates | 3:150161992..150162002 |
Microexon Cluster ID | MEP27 |
Size | 11 |
Phase | 1 |
Pfam Domain Motif | Gelsolin |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,11,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | MRRGADRYTGWMAGWGATCCYCAYYTGTTYDCWTKYWCWTTYWMTAAAGGRAADYTKRAGGTKRMRGARRTHTACAAYTTYWCYCARGATGAYYTGWTGACWGARGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GGAGACTGGAG |
Microexon Amino Acid seq | GRLE |
Microexon-tag DNA Seq | GATATTATTACTAGAGAGCCTCACTTGTATGCATTCTCATTCAAGAACGGGAGACTGGAGGTTACTGAGATCTTCAACTTTTCTCAAGATGATTTGTTAACTGAAGAC |
Microexon-tag Amino Acid Seq | DIITREPHLYAFSFKNGRLEVTEIFNFSQDDLLTED |
Microexon-tag spanning region | 150161872-150162217 |
Microexon-tag prediction score | 0.955 |
Overlapped with the annotated transcript (%) | 82.2 |
New Transcript ID | Zm00001d042084_T021x |
Reference Transcript ID | Zm00001d042084_T021 |
Gene ID | Zm00001d042084 |
Gene Name | NA |
Zm_3:150161992-150162002:- does not have available information here.
Microexon DNA seq | GGAGACTGGAG |
Microexon Amino Acid seq | GRLE |
Microexon-tag DNA Seq | GATATTATTACTAGAGAGCCTCACTTGTATGCATTCTCATTCAAGAACGGGAGACTGGAGGTTACTGAGATCTTCAACTTTTCTCAAGATGATTTGTTAACTGAAGAC |
Microexon-tag Amino Acid seq | DIITREPHLYAFSFKNGRLEVTEIFNFSQDDLLTED |
Transcript ID | Zm.15255.3 |
Gene ID | Zm.15255 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Zm.15255.3 MSTAKVLDPAFQGAGQKVGTEIWRIEDFKPVALPKSDYGKFYCGDSYIVLQTTCTKGGAYLYDIHFWIGKDSSQDEAGTA AIKTVELDAILGGRAIQHRELQGYESDKFLSYFKPCIIPLEGGFASGFKKPEEEKFETRLYICRGKRAIRVKEVPFARSS LNHDDVFVLDTENKIYQFNGANSNIQERAKALEVIQHLKEKYHGGVCDVAIVDDGKLQAESDSGEFWVLFGGFAPIGKKT VSDDDVVLETTAPKLYSINDGQLKLEETALTKAVLENTKCFLLDCGAEIYVWVGRVTQMEDRKSATKAVDEFLINQKRPK TTRVTQVIQGYESHAFKSKFESWPVGNAAGNPGTEEGRGKVAALLKQQRVDPKGAAKSTTPVNEEVPPLLDGGGKLEVWC VDGNTKTALPKEDIGKFYSGDCYIILYTHHSGDKKEEYYLSYWIGKDSLVDDQVSASQIINTMWNSLKGRPVLGRIYQGK EPPQFVALFQPMVILKGGIGSGYKKLIEEKGAMGETYTTEGIALIRVSETSIYNNKTLQVDAVATSLSSTESFVLQSGNA MFTWFGNSSTYEQQQWAAKVAEFLKPGVAVKHCKEGTESSAFWFALGGKQSYTNKNTPQDIITREPHLYAFSFKNGRLEV TEIFNFSQDDLLTEDMMVLDTHGEVFIWIGQYVESKEKQKAFDIGQKYVEHANSIEDLSPHVPLYKVMEGNEPCFFKTYF SWDNTKSLVHGNSFQKKLSLLFGLRSEGAPRSSGNGGPTQRASALAALSSAFNPSSQQRLSNERPKSTGDGPTQRASALA ALSNAFNPSLKPKTSPPSRSGRGSQRAAAVAALSSVLTAEQSGSSEFLRSKASNTAYKTDVDRIVITPAGPSGPSSPQSE AGESNVFHQEKDAAADGAPPDTDGAVAEAGEEETTENVGEATFSYDRLISKSTDPVRGIDYKRREAYLSDSEFQTVFGMT KDAFYRQPNWKQELQKRKADLF* |
CDS seq | >Zm.15255.3 ATGTCAACTGCAAAAGTGTTAGATCCTGCTTTTCAAGGGGCTGGCCAGAAAGTTGGGACAGAAATATGGCGGATTGAAGA TTTTAAGCCAGTTGCACTGCCAAAATCTGATTATGGTAAATTCTACTGTGGAGATTCATACATAGTTCTGCAGACGACCT GTACTAAAGGTGGTGCCTATCTATACGATATCCACTTCTGGATTGGGAAAGATTCGAGTCAAGATGAAGCTGGGACTGCA GCCATCAAGACAGTTGAACTTGATGCCATCCTTGGGGGTCGTGCAATTCAACATAGGGAACTCCAAGGTTACGAATCTGA CAAATTCTTGTCATACTTCAAGCCTTGCATTATACCTTTGGAGGGTGGTTTTGCCTCTGGGTTCAAAAAGCCTGAAGAGG AAAAGTTTGAAACACGGTTGTATATATGCAGAGGGAAGAGAGCTATTCGGGTTAAAGAGGTTCCCTTCGCCCGGTCGTCA TTAAACCATGATGATGTGTTTGTCTTAGATACTGAAAATAAGATATACCAGTTTAATGGTGCTAACTCCAATATCCAAGA AAGGGCCAAAGCGTTGGAAGTAATACAACATTTAAAGGAGAAATACCATGGGGGTGTTTGCGATGTTGCCATCGTTGATG ATGGGAAACTACAAGCAGAGTCAGACTCTGGTGAATTCTGGGTCCTTTTTGGAGGTTTTGCACCAATTGGGAAAAAAACT GTGAGTGATGATGATGTTGTACTTGAAACTACAGCACCAAAACTGTACAGTATCAATGATGGCCAATTGAAGCTGGAAGA AACAGCTCTTACAAAAGCTGTGCTTGAAAATACCAAATGTTTCTTACTTGACTGTGGGGCTGAAATATATGTATGGGTTG GACGGGTAACACAAATGGAGGATAGAAAATCTGCCACTAAAGCAGTTGATGAATTCCTCATTAATCAAAAGCGTCCAAAG ACAACGAGGGTAACTCAAGTGATTCAAGGTTATGAGAGTCATGCTTTCAAGTCCAAGTTTGAATCGTGGCCAGTGGGTAA TGCTGCTGGGAACCCTGGCACAGAGGAAGGGCGGGGAAAAGTTGCCGCTTTATTGAAGCAACAACGCGTTGATCCCAAGG GAGCTGCAAAAAGCACCACTCCAGTAAATGAGGAAGTTCCTCCTTTGCTTGATGGCGGTGGGAAGCTTGAGGTATGGTGC GTTGATGGGAACACTAAGACTGCCCTGCCAAAAGAGGACATTGGAAAGTTTTACAGTGGAGACTGTTATATCATTCTCTA TACACATCATTCGGGCGACAAGAAAGAAGAGTACTATCTCAGCTACTGGATTGGGAAGGATAGCTTGGTGGACGATCAAG TGTCGGCATCTCAAATAATCAATACAATGTGGAATTCATTGAAAGGACGGCCAGTTCTGGGCCGTATATACCAAGGGAAG GAGCCACCACAATTTGTTGCTCTTTTCCAGCCCATGGTTATCTTGAAGGGTGGAATCGGATCTGGATACAAGAAGCTCAT AGAAGAAAAAGGTGCTATGGGTGAGACTTATACTACTGAAGGCATAGCTCTAATTCGAGTATCTGAGACATCTATCTACA ACAACAAGACTCTTCAAGTAGATGCGGTAGCAACGTCTTTAAGCTCAACGGAGTCTTTCGTACTGCAATCTGGAAATGCT ATGTTTACATGGTTTGGCAATTCTAGCACATATGAGCAACAGCAGTGGGCAGCAAAAGTTGCTGAATTTTTGAAGCCTGG CGTTGCAGTGAAGCACTGCAAGGAGGGGACAGAGAGTTCTGCTTTCTGGTTTGCTCTTGGAGGGAAACAGAGTTATACAA ATAAAAACACTCCTCAGGATATTATTACTAGAGAGCCTCACTTGTATGCATTCTCATTCAAGAACGGGAGACTGGAGGTT ACTGAGATCTTCAACTTTTCTCAAGATGATTTGTTAACTGAAGACATGATGGTACTTGACACACATGGTGAAGTTTTCAT TTGGATTGGTCAGTATGTGGAATCAAAAGAGAAACAGAAGGCATTTGACATTGGCCAGAAATACGTGGAGCATGCAAATT CTATTGAAGATCTTTCTCCACATGTACCACTATATAAAGTCATGGAAGGGAATGAGCCATGCTTCTTCAAGACGTACTTT TCTTGGGATAACACAAAATCTTTGGTTCATGGAAATTCCTTCCAGAAGAAACTCTCGCTGCTTTTTGGATTGCGTTCTGA GGGTGCACCTAGGAGCTCTGGTAATGGTGGGCCAACTCAGAGGGCATCTGCATTAGCAGCTCTATCATCCGCATTCAATC CATCATCTCAACAAAGGCTGTCTAATGAGAGGCCTAAAAGCACAGGCGATGGACCCACGCAACGTGCCTCAGCACTGGCT GCCTTATCTAATGCATTCAACCCATCCTTAAAACCCAAAACATCACCTCCATCTCGCTCAGGTCGAGGTTCTCAAAGAGC AGCTGCTGTAGCTGCTCTATCCTCTGTGCTGACTGCTGAGCAATCTGGATCTTCAGAATTTCTACGATCCAAAGCTAGCA ACACAGCATATAAGACTGATGTCGACCGGATTGTCATAACTCCAGCTGGCCCATCAGGCCCATCTTCTCCTCAGTCTGAA GCTGGGGAGTCCAATGTGTTTCACCAGGAAAAAGATGCTGCAGCAGATGGGGCACCGCCTGACACTGATGGAGCAGTGGC TGAGGCCGGAGAGGAAGAAACAACGGAAAATGTTGGTGAAGCGACATTTAGCTATGACCGCTTGATATCCAAATCCACCG ATCCAGTTCGTGGGATAGATTACAAACGCAGAGAGGCATACTTATCAGATAGTGAATTCCAAACTGTTTTTGGCATGACC AAGGATGCATTCTACCGACAGCCAAATTGGAAGCAAGAACTACAGAAGCGAAAAGCAGATCTTTTCTAA |