Microexon ID Zm_3:150161992-150162002:-
Species Zea mays
Coordinates 3:150161992..150162002
Microexon Cluster ID MEP27
Size 11
Phase 1
Pfam Domain Motif Gelsolin
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,11,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq MRRGADRYTGWMAGWGATCCYCAYYTGTTYDCWTKYWCWTTYWMTAAAGGRAADYTKRAGGTKRMRGARRTHTACAAYTTYWCYCARGATGAYYTGWTGACWGARGAT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GGAGACTGGAG
Microexon Amino Acid seq GRLE
Microexon-tag DNA Seq GATATTATTACTAGAGAGCCTCACTTGTATGCATTCTCATTCAAGAACGGGAGACTGGAGGTTACTGAGATCTTCAACTTTTCTCAAGATGATTTGTTAACTGAAGAC
Microexon-tag Amino Acid Seq DIITREPHLYAFSFKNGRLEVTEIFNFSQDDLLTED
Microexon-tag spanning region150161872-150162217
Microexon-tag prediction score0.955
Overlapped with the annotated transcript (%) 82.2
New Transcript ID Zm00001d042084_T021x
Reference Transcript ID Zm00001d042084_T021
Gene ID Zm00001d042084
Gene Name NA
Zm_3:150161992-150162002:- does not have available information here.
Microexon DNA seq GGAGACTGGAG
Microexon Amino Acid seq GRLE
Microexon-tag DNA Seq GATATTATTACTAGAGAGCCTCACTTGTATGCATTCTCATTCAAGAACGGGAGACTGGAGGTTACTGAGATCTTCAACTTTTCTCAAGATGATTTGTTAACTGAAGAC
Microexon-tag Amino Acid seq DIITREPHLYAFSFKNGRLEVTEIFNFSQDDLLTED
Transcript ID Zm.15255.3
Gene ID Zm.15255
Gene Name NA
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >Zm.15255.3
MSTAKVLDPAFQGAGQKVGTEIWRIEDFKPVALPKSDYGKFYCGDSYIVLQTTCTKGGAYLYDIHFWIGKDSSQDEAGTA
AIKTVELDAILGGRAIQHRELQGYESDKFLSYFKPCIIPLEGGFASGFKKPEEEKFETRLYICRGKRAIRVKEVPFARSS
LNHDDVFVLDTENKIYQFNGANSNIQERAKALEVIQHLKEKYHGGVCDVAIVDDGKLQAESDSGEFWVLFGGFAPIGKKT
VSDDDVVLETTAPKLYSINDGQLKLEETALTKAVLENTKCFLLDCGAEIYVWVGRVTQMEDRKSATKAVDEFLINQKRPK
TTRVTQVIQGYESHAFKSKFESWPVGNAAGNPGTEEGRGKVAALLKQQRVDPKGAAKSTTPVNEEVPPLLDGGGKLEVWC
VDGNTKTALPKEDIGKFYSGDCYIILYTHHSGDKKEEYYLSYWIGKDSLVDDQVSASQIINTMWNSLKGRPVLGRIYQGK
EPPQFVALFQPMVILKGGIGSGYKKLIEEKGAMGETYTTEGIALIRVSETSIYNNKTLQVDAVATSLSSTESFVLQSGNA
MFTWFGNSSTYEQQQWAAKVAEFLKPGVAVKHCKEGTESSAFWFALGGKQSYTNKNTPQDIITREPHLYAFSFKNGRLEV
TEIFNFSQDDLLTEDMMVLDTHGEVFIWIGQYVESKEKQKAFDIGQKYVEHANSIEDLSPHVPLYKVMEGNEPCFFKTYF
SWDNTKSLVHGNSFQKKLSLLFGLRSEGAPRSSGNGGPTQRASALAALSSAFNPSSQQRLSNERPKSTGDGPTQRASALA
ALSNAFNPSLKPKTSPPSRSGRGSQRAAAVAALSSVLTAEQSGSSEFLRSKASNTAYKTDVDRIVITPAGPSGPSSPQSE
AGESNVFHQEKDAAADGAPPDTDGAVAEAGEEETTENVGEATFSYDRLISKSTDPVRGIDYKRREAYLSDSEFQTVFGMT
KDAFYRQPNWKQELQKRKADLF*
CDS seq >Zm.15255.3
ATGTCAACTGCAAAAGTGTTAGATCCTGCTTTTCAAGGGGCTGGCCAGAAAGTTGGGACAGAAATATGGCGGATTGAAGA
TTTTAAGCCAGTTGCACTGCCAAAATCTGATTATGGTAAATTCTACTGTGGAGATTCATACATAGTTCTGCAGACGACCT
GTACTAAAGGTGGTGCCTATCTATACGATATCCACTTCTGGATTGGGAAAGATTCGAGTCAAGATGAAGCTGGGACTGCA
GCCATCAAGACAGTTGAACTTGATGCCATCCTTGGGGGTCGTGCAATTCAACATAGGGAACTCCAAGGTTACGAATCTGA
CAAATTCTTGTCATACTTCAAGCCTTGCATTATACCTTTGGAGGGTGGTTTTGCCTCTGGGTTCAAAAAGCCTGAAGAGG
AAAAGTTTGAAACACGGTTGTATATATGCAGAGGGAAGAGAGCTATTCGGGTTAAAGAGGTTCCCTTCGCCCGGTCGTCA
TTAAACCATGATGATGTGTTTGTCTTAGATACTGAAAATAAGATATACCAGTTTAATGGTGCTAACTCCAATATCCAAGA
AAGGGCCAAAGCGTTGGAAGTAATACAACATTTAAAGGAGAAATACCATGGGGGTGTTTGCGATGTTGCCATCGTTGATG
ATGGGAAACTACAAGCAGAGTCAGACTCTGGTGAATTCTGGGTCCTTTTTGGAGGTTTTGCACCAATTGGGAAAAAAACT
GTGAGTGATGATGATGTTGTACTTGAAACTACAGCACCAAAACTGTACAGTATCAATGATGGCCAATTGAAGCTGGAAGA
AACAGCTCTTACAAAAGCTGTGCTTGAAAATACCAAATGTTTCTTACTTGACTGTGGGGCTGAAATATATGTATGGGTTG
GACGGGTAACACAAATGGAGGATAGAAAATCTGCCACTAAAGCAGTTGATGAATTCCTCATTAATCAAAAGCGTCCAAAG
ACAACGAGGGTAACTCAAGTGATTCAAGGTTATGAGAGTCATGCTTTCAAGTCCAAGTTTGAATCGTGGCCAGTGGGTAA
TGCTGCTGGGAACCCTGGCACAGAGGAAGGGCGGGGAAAAGTTGCCGCTTTATTGAAGCAACAACGCGTTGATCCCAAGG
GAGCTGCAAAAAGCACCACTCCAGTAAATGAGGAAGTTCCTCCTTTGCTTGATGGCGGTGGGAAGCTTGAGGTATGGTGC
GTTGATGGGAACACTAAGACTGCCCTGCCAAAAGAGGACATTGGAAAGTTTTACAGTGGAGACTGTTATATCATTCTCTA
TACACATCATTCGGGCGACAAGAAAGAAGAGTACTATCTCAGCTACTGGATTGGGAAGGATAGCTTGGTGGACGATCAAG
TGTCGGCATCTCAAATAATCAATACAATGTGGAATTCATTGAAAGGACGGCCAGTTCTGGGCCGTATATACCAAGGGAAG
GAGCCACCACAATTTGTTGCTCTTTTCCAGCCCATGGTTATCTTGAAGGGTGGAATCGGATCTGGATACAAGAAGCTCAT
AGAAGAAAAAGGTGCTATGGGTGAGACTTATACTACTGAAGGCATAGCTCTAATTCGAGTATCTGAGACATCTATCTACA
ACAACAAGACTCTTCAAGTAGATGCGGTAGCAACGTCTTTAAGCTCAACGGAGTCTTTCGTACTGCAATCTGGAAATGCT
ATGTTTACATGGTTTGGCAATTCTAGCACATATGAGCAACAGCAGTGGGCAGCAAAAGTTGCTGAATTTTTGAAGCCTGG
CGTTGCAGTGAAGCACTGCAAGGAGGGGACAGAGAGTTCTGCTTTCTGGTTTGCTCTTGGAGGGAAACAGAGTTATACAA
ATAAAAACACTCCTCAGGATATTATTACTAGAGAGCCTCACTTGTATGCATTCTCATTCAAGAACGGGAGACTGGAGGTT
ACTGAGATCTTCAACTTTTCTCAAGATGATTTGTTAACTGAAGACATGATGGTACTTGACACACATGGTGAAGTTTTCAT
TTGGATTGGTCAGTATGTGGAATCAAAAGAGAAACAGAAGGCATTTGACATTGGCCAGAAATACGTGGAGCATGCAAATT
CTATTGAAGATCTTTCTCCACATGTACCACTATATAAAGTCATGGAAGGGAATGAGCCATGCTTCTTCAAGACGTACTTT
TCTTGGGATAACACAAAATCTTTGGTTCATGGAAATTCCTTCCAGAAGAAACTCTCGCTGCTTTTTGGATTGCGTTCTGA
GGGTGCACCTAGGAGCTCTGGTAATGGTGGGCCAACTCAGAGGGCATCTGCATTAGCAGCTCTATCATCCGCATTCAATC
CATCATCTCAACAAAGGCTGTCTAATGAGAGGCCTAAAAGCACAGGCGATGGACCCACGCAACGTGCCTCAGCACTGGCT
GCCTTATCTAATGCATTCAACCCATCCTTAAAACCCAAAACATCACCTCCATCTCGCTCAGGTCGAGGTTCTCAAAGAGC
AGCTGCTGTAGCTGCTCTATCCTCTGTGCTGACTGCTGAGCAATCTGGATCTTCAGAATTTCTACGATCCAAAGCTAGCA
ACACAGCATATAAGACTGATGTCGACCGGATTGTCATAACTCCAGCTGGCCCATCAGGCCCATCTTCTCCTCAGTCTGAA
GCTGGGGAGTCCAATGTGTTTCACCAGGAAAAAGATGCTGCAGCAGATGGGGCACCGCCTGACACTGATGGAGCAGTGGC
TGAGGCCGGAGAGGAAGAAACAACGGAAAATGTTGGTGAAGCGACATTTAGCTATGACCGCTTGATATCCAAATCCACCG
ATCCAGTTCGTGGGATAGATTACAAACGCAGAGAGGCATACTTATCAGATAGTGAATTCCAAACTGTTTTTGGCATGACC
AAGGATGCATTCTACCGACAGCCAAATTGGAAGCAAGAACTACAGAAGCGAAAAGCAGATCTTTTCTAA