
Microexon ID | Zm_2:210593470-210593480:+ |
Species | Zea mays | Coordinates | 2:210593470..210593480 |
Microexon Cluster ID | MEP27 |
Size | 11 |
Phase | 1 |
Pfam Domain Motif | Gelsolin |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,11,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | MRRGADRYTGWMAGWGATCCYCAYYTGTTYDCWTKYWCWTTYWMTAAAGGRAADYTKRAGGTKRMRGARRTHTACAAYTTYWCYCARGATGAYYTGWTGACWGARGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GCAATTTGAAG |
Microexon Amino Acid seq | GNLK |
Microexon-tag DNA Seq | CGAGAACTCGAAAGTGACCCCCATCTTTTCTCATGCATCCTGTCGAAAGGCAATTTGAAGGTCAAAGAAATACACCACTTTACTCAAGATGATCTAATGACAGAAGAT |
Microexon-tag Amino Acid Seq | RELESDPHLFSCILSKGNLKVKEIHHFTQDDLMTED |
Microexon-tag spanning region | 210593300-210593617 |
Microexon-tag prediction score | 0.9463 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Zm00001d006533_T001x |
Reference Transcript ID | Zm00001d006533_T001 |
Gene ID | Zm00001d006533 |
Gene Name | NA |
Transcript ID | Zm00001d006533_T001 |
Protein ID | Zm00001d006533_P001 |
Gene ID | Zm00001d006533 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Zm00001d006533_P001 MSVSMKDLDPAFRGSGQKDGLEIWRIENFKPIPAPASSYGKFFMGDSYIILKTTALKNGSLRHDIHYWIGKDTSQDEAGT AAILTVELDAALGGRAVQYREIQGNETEKFLSYFRPCIMPQPGGVASGFNHVEVNEQDYKTHLYVCHGKHVVHVNEVPFA RSSLNHDDIFILDTKSKIFQFSGSNSSIQERAKALEVVQYIKDTFHEGKCEIASVEDGRMMADAEAGEFWGFFGGFAPLP RRAPAEGNEKHDETAFKLLCFDQGKLEPVDCQSLAHELLETNKCYFLDCGAELYVWMGRITSLMERKGASEAAEKLLSDS NRTRTHIIKVIEGFETVTFKSKFKEWPQTPELKLSSEDGRGKVAALLKRQGLNVKGLMKAAPTQEEPQSYIDSTGNLQVW RVNDKDKVQLSPSDQSKFYTGDCYIFQYTYPGDDKEECLIGTWFGKKSIEEDRVIAVSLASKMVESAKFQAVQARFYEGK EPIQFFVIFQSFQVFKGGLSSGYKRFIAENGIDDESYSEDGLALFRIQGSGPENMQAIQVEPVASSLNSSYCYILHNGNT VFTWAGNLTTALDQELMERQLDVIKPNTQSRSQKEGSETDQFWSLLGGKSEYSGQKMVRELESDPHLFSCILSKGNLKVK EIHHFTQDDLMTEDVFILDCHTSIFVWVGQQVDVKGRLQALDAGEKFIVLDFLMENLARETPVFTVMEGNEPPFFTRFFT WDSAKSLMHGNSYQRKLAIVKGGGAPALDKPKRRTTVYSGRSTTQDKSQRSRSMSFSPERVRVRGRSPAFTALAANFESS SNRNLSTPPPVVKKLYPKSVTPDPSNTASKSPAIAALAGSLDHPSQTPALEFMKGGSESEKPKQEGDGKEGVDTVATRVE SLTINEDVKENEPEDDEGLPIYLYERLKTTAADPVTEIDVTRRETYLSSTEFKEKFGMTKEAFSKLPKWKQNRLKIALQL F* |
CDS seq | >Zm00001d006533_T001 ATGTCAGTTTCTATGAAGGACCTGGACCCAGCTTTCCGTGGCTCTGGACAAAAGGACGGCTTGGAAATATGGCGTATTGA GAATTTCAAGCCGATCCCTGCCCCTGCATCTTCGTATGGAAAGTTCTTCATGGGTGATTCTTACATTATCTTGAAGACAA CAGCCTTGAAAAATGGTTCTCTTCGCCATGATATCCATTACTGGATTGGTAAAGATACTAGTCAGGACGAAGCTGGAACT GCTGCGATTTTAACAGTAGAGCTTGATGCTGCTCTTGGCGGGCGTGCTGTTCAGTACCGAGAAATACAAGGCAATGAAAC AGAAAAATTCCTGTCCTATTTTAGACCATGCATCATGCCACAGCCAGGAGGAGTGGCATCTGGATTCAACCATGTTGAGG TCAATGAGCAGGATTACAAGACCCACTTATATGTCTGCCATGGGAAGCATGTTGTTCATGTTAACGAGGTTCCCTTTGCT CGATCATCCCTTAATCATGATGACATATTTATTTTGGATACGAAGTCCAAAATTTTCCAGTTCAGTGGCTCAAACTCATC CATTCAAGAGCGAGCAAAAGCTCTTGAAGTTGTGCAGTACATCAAAGATACATTTCATGAGGGCAAGTGTGAAATTGCAT CTGTTGAGGATGGTAGAATGATGGCTGATGCGGAAGCTGGTGAATTCTGGGGTTTTTTTGGCGGCTTTGCCCCTCTTCCT AGGAGGGCACCTGCAGAAGGCAATGAGAAACATGATGAAACTGCTTTCAAATTGCTATGTTTTGACCAAGGAAAGCTGGA GCCTGTCGACTGCCAATCTTTAGCACATGAATTACTTGAGACAAACAAGTGTTACTTCTTAGACTGTGGTGCTGAATTGT ATGTTTGGATGGGTAGAATTACATCCCTGATGGAGAGAAAGGGTGCTAGTGAAGCTGCTGAGAAATTGCTCTCTGATTCA AACCGAACAAGAACACATATAATCAAAGTGATTGAAGGGTTTGAGACTGTTACGTTCAAGTCAAAATTTAAGGAGTGGCC ACAGACACCTGAGTTGAAGTTGTCATCGGAGGATGGAAGAGGCAAAGTTGCAGCTCTTCTCAAACGCCAGGGCTTAAATG TTAAGGGTTTGATGAAAGCTGCTCCTACACAAGAAGAACCTCAATCCTATATTGATTCCACTGGCAATCTGCAGGTTTGG CGTGTAAATGATAAAGACAAGGTTCAACTCTCACCCTCTGACCAATCCAAATTTTACACCGGCGATTGCTACATATTTCA GTATACTTATCCTGGAGATGATAAGGAGGAATGTCTTATTGGAACCTGGTTTGGGAAAAAGAGTATTGAGGAGGATAGGG TAATAGCAGTTTCACTTGCAAGTAAGATGGTTGAATCTGCTAAGTTTCAGGCTGTCCAGGCGCGCTTTTATGAGGGGAAA GAACCGATCCAGTTCTTTGTGATATTTCAAAGCTTCCAAGTGTTTAAGGGTGGTCTTAGTTCTGGATACAAGAGATTTAT CGCTGAAAATGGCATCGATGATGAAAGTTATTCTGAAGATGGGCTTGCACTCTTTCGTATTCAAGGTTCAGGACCAGAAA ACATGCAGGCGATTCAAGTTGAACCTGTGGCCTCATCATTGAATTCATCATATTGTTACATTCTACATAATGGAAACACT GTGTTCACTTGGGCTGGAAATCTGACCACTGCATTGGACCAAGAGTTAATGGAAAGGCAGCTTGATGTTATTAAGCCAAA CACACAGTCTAGGTCACAAAAGGAAGGGTCAGAAACGGACCAGTTTTGGAGTTTACTGGGGGGCAAATCTGAGTACTCAG GCCAAAAAATGGTGCGAGAACTCGAAAGTGACCCCCATCTTTTCTCATGCATCCTGTCGAAAGGCAATTTGAAGGTCAAA GAAATACACCACTTTACTCAAGATGATCTAATGACAGAAGATGTTTTCATTCTGGACTGTCACACGAGCATATTTGTTTG GGTTGGTCAGCAGGTGGATGTTAAAGGCAGGTTACAAGCTCTGGATGCTGGGGAGAAATTTATTGTGCTTGATTTTCTTA TGGAAAACCTTGCCCGTGAAACACCAGTTTTCACCGTTATGGAGGGGAATGAGCCTCCCTTTTTCACTAGATTCTTCACC TGGGACTCCGCAAAATCACTGATGCATGGCAATTCATACCAGAGGAAGCTCGCCATTGTAAAAGGTGGAGGTGCTCCAGC ATTGGATAAACCGAAACGACGAACAACCGTCTATTCAGGAAGGAGTACTACACAAGATAAATCCCAACGCTCCAGAAGCA TGTCCTTCAGCCCTGAACGTGTGCGTGTTAGGGGAAGATCTCCAGCATTCACTGCATTGGCTGCTAATTTTGAAAGTTCA AGCAACAGAAATCTTTCCACTCCTCCACCTGTAGTTAAGAAACTTTACCCGAAATCTGTTACACCTGATCCGTCGAATAC TGCTTCTAAGTCACCTGCAATTGCTGCTCTGGCTGGTTCTTTGGATCACCCTTCTCAAACTCCTGCTCTAGAATTCATGA AAGGTGGCTCCGAGTCAGAGAAGCCAAAACAGGAGGGAGATGGTAAAGAAGGTGTTGATACTGTGGCCACAAGAGTTGAA TCTCTGACTATAAATGAAGATGTAAAAGAAAACGAGCCAGAAGATGACGAGGGCCTTCCGATTTACCTGTATGAACGTCT GAAGACCACAGCTGCTGATCCTGTTACTGAAATTGATGTCACGAGGCGAGAGACCTACTTATCTTCAACTGAGTTCAAAG AGAAGTTTGGGATGACAAAGGAAGCATTTAGCAAGCTTCCGAAGTGGAAGCAGAACAGGCTAAAAATTGCTCTTCAACTT TTTTAG |
Microexon DNA seq | GCAATTTGAAG |
Microexon Amino Acid seq | GNLK |
Microexon-tag DNA Seq | CGAGAACTCGAAAGTGACCCCCATCTTTTCTCATGCATCCTGTCGAAAGGCAATTTGAAGGTCAAAGAAATACACCACTTTACTCAAGATGATCTAATGACAGAAGAT |
Microexon-tag Amino Acid seq | RELESDPHLFSCILSKGNLKVKEIHHFTQDDLMTED |
Transcript ID | Zm00001d006533_T001 |
Gene ID | Zm.12140 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Zm00001d006533_T001 MSVSMKDLDPAFRGSGQKDGLEIWRIENFKPIPAPASSYGKFFMGDSYIILKTTALKNGSLRHDIHYWIGKDTSQDEAGT AAILTVELDAALGGRAVQYREIQGNETEKFLSYFRPCIMPQPGGVASGFNHVEVNEQDYKTHLYVCHGKHVVHVNEVPFA RSSLNHDDIFILDTKSKIFQFSGSNSSIQERAKALEVVQYIKDTFHEGKCEIASVEDGRMMADAEAGEFWGFFGGFAPLP RRAPAEGNEKHDETAFKLLCFDQGKLEPVDCQSLAHELLETNKCYFLDCGAELYVWMGRITSLMERKGASEAAEKLLSDS NRTRTHIIKVIEGFETVTFKSKFKEWPQTPELKLSSEDGRGKVAALLKRQGLNVKGLMKAAPTQEEPQSYIDSTGNLQVW RVNDKDKVQLSPSDQSKFYTGDCYIFQYTYPGDDKEECLIGTWFGKKSIEEDRVIAVSLASKMVESAKFQAVQARFYEGK EPIQFFVIFQSFQVFKGGLSSGYKRFIAENGIDDESYSEDGLALFRIQGSGPENMQAIQVEPVASSLNSSYCYILHNGNT VFTWAGNLTTALDQELMERQLDVIKPNTQSRSQKEGSETDQFWSLLGGKSEYSGQKMVRELESDPHLFSCILSKGNLKVK EIHHFTQDDLMTEDVFILDCHTSIFVWVGQQVDVKGRLQALDAGEKFIVLDFLMENLARETPVFTVMEGNEPPFFTRFFT WDSAKSLMHGNSYQRKLAIVKGGGAPALDKPKRRTTVYSGRSTTQDKSQRSRSMSFSPERVRVRGRSPAFTALAANFESS SNRNLSTPPPVVKKLYPKSVTPDPSNTASKSPAIAALAGSLDHPSQTPALEFMKGGSESEKPKQEGDGKEGVDTVATRVE SLTINEDVKENEPEDDEGLPIYLYERLKTTAADPVTEIDVTRRETYLSSTEFKEKFGMTKEAFSKLPKWKQNRLKIALQL F* |
CDS seq | >Zm00001d006533_T001 ATGTCAGTTTCTATGAAGGACCTGGACCCAGCTTTCCGTGGCTCTGGACAAAAGGACGGCTTGGAAATATGGCGTATTGA GAATTTCAAGCCGATCCCTGCCCCTGCATCTTCGTATGGAAAGTTCTTCATGGGTGATTCTTACATTATCTTGAAGACAA CAGCCTTGAAAAATGGTTCTCTTCGCCATGATATCCATTACTGGATTGGTAAAGATACTAGTCAGGACGAAGCTGGAACT GCTGCGATTTTAACAGTAGAGCTTGATGCTGCTCTTGGCGGGCGTGCTGTTCAGTACCGAGAAATACAAGGCAATGAAAC AGAAAAATTCCTGTCCTATTTTAGACCATGCATCATGCCACAGCCAGGAGGAGTGGCATCTGGATTCAACCATGTTGAGG TCAATGAGCAGGATTACAAGACCCACTTATATGTCTGCCATGGGAAGCATGTTGTTCATGTTAACGAGGTTCCCTTTGCT CGATCATCCCTTAATCATGATGACATATTTATTTTGGATACGAAGTCCAAAATTTTCCAGTTCAGTGGCTCAAACTCATC CATTCAAGAGCGAGCAAAAGCTCTTGAAGTTGTGCAGTACATCAAAGATACATTTCATGAGGGCAAGTGTGAAATTGCAT CTGTTGAGGATGGTAGAATGATGGCTGATGCGGAAGCTGGTGAATTCTGGGGTTTTTTTGGCGGCTTTGCCCCTCTTCCT AGGAGGGCACCTGCAGAAGGCAATGAGAAACATGATGAAACTGCTTTCAAATTGCTATGTTTTGACCAAGGAAAGCTGGA GCCTGTCGACTGCCAATCTTTAGCACATGAATTACTTGAGACAAACAAGTGTTACTTCTTAGACTGTGGTGCTGAATTGT ATGTTTGGATGGGTAGAATTACATCCCTGATGGAGAGAAAGGGTGCTAGTGAAGCTGCTGAGAAATTGCTCTCTGATTCA AACCGAACAAGAACACATATAATCAAAGTGATTGAAGGGTTTGAGACTGTTACGTTCAAGTCAAAATTTAAGGAGTGGCC ACAGACACCTGAGTTGAAGTTGTCATCGGAGGATGGAAGAGGCAAAGTTGCAGCTCTTCTCAAACGCCAGGGCTTAAATG TTAAGGGTTTGATGAAAGCTGCTCCTACACAAGAAGAACCTCAATCCTATATTGATTCCACTGGCAATCTGCAGGTTTGG CGTGTAAATGATAAAGACAAGGTTCAACTCTCACCCTCTGACCAATCCAAATTTTACACCGGCGATTGCTACATATTTCA GTATACTTATCCTGGAGATGATAAGGAGGAATGTCTTATTGGAACCTGGTTTGGGAAAAAGAGTATTGAGGAGGATAGGG TAATAGCAGTTTCACTTGCAAGTAAGATGGTTGAATCTGCTAAGTTTCAGGCTGTCCAGGCGCGCTTTTATGAGGGGAAA GAACCGATCCAGTTCTTTGTGATATTTCAAAGCTTCCAAGTGTTTAAGGGTGGTCTTAGTTCTGGATACAAGAGATTTAT CGCTGAAAATGGCATCGATGATGAAAGTTATTCTGAAGATGGGCTTGCACTCTTTCGTATTCAAGGTTCAGGACCAGAAA ACATGCAGGCGATTCAAGTTGAACCTGTGGCCTCATCATTGAATTCATCATATTGTTACATTCTACATAATGGAAACACT GTGTTCACTTGGGCTGGAAATCTGACCACTGCATTGGACCAAGAGTTAATGGAAAGGCAGCTTGATGTTATTAAGCCAAA CACACAGTCTAGGTCACAAAAGGAAGGGTCAGAAACGGACCAGTTTTGGAGTTTACTGGGGGGCAAATCTGAGTACTCAG GCCAAAAAATGGTGCGAGAACTCGAAAGTGACCCCCATCTTTTCTCATGCATCCTGTCGAAAGGCAATTTGAAGGTCAAA GAAATACACCACTTTACTCAAGATGATCTAATGACAGAAGATGTTTTCATTCTGGACTGTCACACGAGCATATTTGTTTG GGTTGGTCAGCAGGTGGATGTTAAAGGCAGGTTACAAGCTCTGGATGCTGGGGAGAAATTTATTGTGCTTGATTTTCTTA TGGAAAACCTTGCCCGTGAAACACCAGTTTTCACCGTTATGGAGGGGAATGAGCCTCCCTTTTTCACTAGATTCTTCACC TGGGACTCCGCAAAATCACTGATGCATGGCAATTCATACCAGAGGAAGCTCGCCATTGTAAAAGGTGGAGGTGCTCCAGC ATTGGATAAACCGAAACGACGAACAACCGTCTATTCAGGAAGGAGTACTACACAAGATAAATCCCAACGCTCCAGAAGCA TGTCCTTCAGCCCTGAACGTGTGCGTGTTAGGGGAAGATCTCCAGCATTCACTGCATTGGCTGCTAATTTTGAAAGTTCA AGCAACAGAAATCTTTCCACTCCTCCACCTGTAGTTAAGAAACTTTACCCGAAATCTGTTACACCTGATCCGTCGAATAC TGCTTCTAAGTCACCTGCAATTGCTGCTCTGGCTGGTTCTTTGGATCACCCTTCTCAAACTCCTGCTCTAGAATTCATGA AAGGTGGCTCCGAGTCAGAGAAGCCAAAACAGGAGGGAGATGGTAAAGAAGGTGTTGATACTGTGGCCACAAGAGTTGAA TCTCTGACTATAAATGAAGATGTAAAAGAAAACGAGCCAGAAGATGACGAGGGCCTTCCGATTTACCTGTATGAACGTCT GAAGACCACAGCTGCTGATCCTGTTACTGAAATTGATGTCACGAGGCGAGAGACCTACTTATCTTCAACTGAGTTCAAAG AGAAGTTTGGGATGACAAAGGAAGCATTTAGCAAGCTTCCGAAGTGGAAGCAGAACAGGCTAAAAATTGCTCTTCAACTT TTTTAG |