
Microexon ID | Zm_2:12232824-12232834:+ |
Species | Zea mays | Coordinates | 2:12232824..12232834 |
Microexon Cluster ID | MEP27 |
Size | 11 |
Phase | 1 |
Pfam Domain Motif | Gelsolin |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,11,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | MRRGADRYTGWMAGWGATCCYCAYYTGTTYDCWTKYWCWTTYWMTAAAGGRAADYTKRAGGTKRMRGARRTHTACAAYTTYWCYCARGATGAYYTGWTGACWGARGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Zm_2:12232824-12232834:+ does not have available information here.
Transcript ID | Zm00001d002413_T002 |
Protein ID | Zm00001d002413_P002 |
Gene ID | Zm00001d002413 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Zm00001d002413_P002 MSLSMKDLDTAFHGAGQKDGLMVWRIENFKPVPVPTSLHGKFYMGDSYIILKTTALKNGSFRHDIHYWLGKDTSQDEAGT AAILTVELDAALGGRAVQYRESQGNETERFLSYFRPCIMPQSGGVVSGFNHVEVNDQKHVTRLYVCRGKHVVHVKEVPFT RSSLNHEDIFILDTKSKIFQFNGSNSCIQERAKALEVVQYIRDTFHEGKCEVAGVEDGKLMADAEAGEFWALFGGFAPLP KKTLSEDNGEDKEIIIKLMCINQGKLEQINFESLARELLEPNKCYLLDCGAEIYVWMGRSASLQERKGASKIAEKLLIDA SRTKSHVIKVIEGFETVTFKSKFIEWPPTPDLKLSSEDGRVKVAALLKSQGLDVKGLMKTAPVKEEPRPYIDCTGHLQVW RVNGNGKTLLSCADQSKFYTGDCYIFQYTYSGDDKEECLIGTWFGKRSIEVERVSALSLASKMVQASKFQAIQARLYEGK EPIQFFVIFQSFQLFKGGLSSGYKNFVVENDIVDDTYSEGGIALFRIQGSGSENMQALQVDPLASSLNSSYCYILHNGNT VFTWIGNVTTSLDHDLVERQLDVIKPELPSRSLKEGRETDQFWEVLGGKSKYPNQKVERENENDPHLFSCIISKGNIRVK EIHHFTQDDLMTEDVFILDCHSDIFVWVGQKVDTKVKSQAMDIGEKFLVHDFLMEKLSRETPIFIVSEGSEPQFFTRFFN WDSTKSLVHGSSYQRKLGVLKGGAPPTVDKPKRRTPAFTGRSSGQDKSHRSRSMSTSPDRPRVRGRSPAFNMLTSAFENT SNTRNLSTPPPVVRKPFSKSGCPEHSRVSPKKSAISSLTRSFEGHMKSTIPKSVKVSPELEKATQEEGATSGANENKQED DEGRVIYPYERLTTTAEDPAPDIDVTKRETYLSSAEFKDKFNMIRAEFYKLPKWKQSKLKSCVQLF* |
CDS seq | >Zm00001d002413_T002 ATGTCACTATCTATGAAGGATTTGGACACGGCCTTCCATGGAGCTGGACAAAAGGACGGTTTGATGGTATGGCGTATTGA GAATTTTAAGCCAGTTCCTGTGCCAACATCATTACATGGAAAATTTTATATGGGTGATTCATATATCATCTTGAAGACAA CAGCTTTAAAAAATGGTTCCTTTCGCCATGACATCCATTATTGGCTTGGTAAAGACACTAGTCAGGATGAGGCTGGAACT GCTGCAATTTTAACTGTGGAGCTTGATGCTGCGCTTGGAGGACGTGCTGTCCAGTACCGGGAATCACAAGGCAATGAAAC TGAAAGGTTTCTCTCATATTTTAGGCCTTGCATCATGCCACAATCAGGAGGGGTAGTTTCTGGGTTCAACCATGTAGAAG TCAATGATCAGAAGCATGTTACCCGATTATATGTGTGCCGAGGAAAACATGTTGTCCATGTTAAAGAGGTTCCTTTTACT CGTTCATCCCTTAACCATGAGGACATATTTATTTTGGATACCAAGTCAAAAATTTTCCAGTTCAATGGTTCTAACTCATG CATTCAGGAGAGAGCAAAAGCTCTTGAAGTTGTACAGTATATCAGAGATACTTTCCATGAGGGCAAGTGTGAAGTTGCAG GGGTTGAGGATGGAAAATTGATGGCTGATGCAGAAGCTGGTGAATTTTGGGCTTTGTTTGGTGGCTTCGCTCCTCTTCCA AAGAAGACACTTTCAGAGGATAACGGGGAAGACAAGGAAATCATCATCAAATTGATGTGCATCAACCAAGGAAAATTGGA GCAAATTAATTTTGAATCCTTGGCGCGTGAGTTACTTGAGCCAAACAAATGCTACTTGCTTGACTGTGGTGCTGAAATAT ATGTATGGATGGGCAGAAGTGCTTCTTTGCAAGAAAGAAAGGGCGCGAGCAAAATTGCTGAGAAACTACTCATTGATGCT AGTCGAACAAAATCACATGTTATCAAAGTGATCGAGGGATTCGAGACAGTCACGTTCAAGTCAAAATTTATTGAGTGGCC ACCCACACCTGATTTGAAGTTATCATCTGAGGATGGAAGAGTCAAAGTTGCAGCCCTCCTCAAATCTCAAGGATTAGATG TTAAAGGCTTGATGAAAACTGCACCTGTAAAAGAAGAACCCCGGCCTTACATTGATTGCACAGGTCATTTGCAGGTATGG AGGGTTAATGGAAATGGCAAGACTCTTCTTTCATGTGCTGACCAATCAAAATTTTACACTGGAGATTGTTACATTTTTCA ATACACATATAGTGGAGATGATAAGGAGGAATGTCTTATTGGAACTTGGTTCGGGAAGAGAAGCATTGAGGTGGAGAGGG TTTCAGCGTTGTCACTGGCTAGCAAGATGGTTCAGGCTTCCAAGTTCCAAGCTATCCAGGCCCGACTTTATGAAGGGAAA GAACCAATTCAGTTCTTTGTCATATTTCAAAGTTTTCAACTATTCAAGGGTGGACTTAGCTCTGGATACAAGAACTTTGT TGTTGAAAATGATATTGTGGATGACACTTACTCTGAAGGTGGGATTGCCCTATTCCGGATTCAGGGTTCAGGATCAGAAA ACATGCAAGCACTTCAGGTAGATCCGCTGGCTTCGTCCTTAAACTCGTCCTATTGTTACATTCTACATAATGGAAACACA GTGTTCACATGGATTGGCAATGTTACGACCTCATTGGATCATGACTTGGTTGAGAGACAACTAGATGTAATTAAGCCAGA ATTGCCTTCCAGGTCACTAAAGGAGGGGAGAGAAACCGACCAATTTTGGGAAGTACTGGGCGGTAAATCCAAGTATCCAA ACCAAAAAGTTGAAAGAGAAAATGAAAATGACCCCCATCTTTTCTCATGCATCATATCCAAAGGCAATATAAGGGTCAAA GAAATACACCATTTTACTCAGGATGATCTGATGACAGAGGATGTTTTTATTCTTGATTGTCACTCAGACATATTTGTTTG GGTTGGCCAGAAGGTGGATACCAAAGTGAAATCACAAGCTATGGATATTGGAGAGAAATTTCTTGTTCATGATTTCCTTA TGGAAAAACTATCACGAGAAACACCAATATTCATTGTGTCAGAGGGTAGCGAGCCACAATTTTTTACTAGATTCTTCAAT TGGGACTCTACAAAATCTCTTGTGCATGGCAGTTCATACCAAAGGAAGCTTGGTGTCCTAAAGGGTGGAGCACCTCCAAC AGTGGATAAACCAAAACGACGAACACCAGCATTTACAGGAAGAAGTTCAGGACAAGATAAATCTCATCGTTCAAGAAGCA TGTCCACTAGCCCAGATCGTCCACGTGTTCGTGGAAGGTCTCCAGCCTTCAATATGTTAACTTCTGCCTTTGAGAACACG AGCAATACCAGGAACCTTTCCACCCCTCCCCCTGTTGTGAGAAAGCCTTTCTCAAAATCTGGATGTCCTGAACACTCAAG GGTGTCACCCAAAAAATCAGCTATCAGTTCCCTCACCAGGTCTTTTGAAGGTCACATGAAAAGTACAATACCAAAATCAG TAAAAGTGAGCCCTGAGCTAGAGAAGGCGACACAGGAAGAAGGTGCCACAAGCGGTGCAAACGAAAACAAGCAAGAAGAT GACGAAGGGCGTGTGATCTACCCATATGAACGTCTGACAACGACAGCAGAAGATCCTGCCCCTGACATCGACGTGACCAA ACGAGAGACCTACTTATCGTCAGCCGAGTTCAAAGACAAATTCAACATGATAAGGGCAGAGTTCTACAAGCTTCCCAAGT GGAAGCAGAGCAAATTGAAGTCTTGTGTCCAACTTTTTTAG |
Microexon DNA seq | GCAATATAAGG |
Microexon Amino Acid seq | GNIR |
Microexon-tag DNA Seq | AGAGAAAATGAAAATGACCCCCATCTTTTCTCATGCATCATATCCAAAGGCAATATAAGGGTCAAAGAAATACACCATTTTACTCAGGATGATCTGATGACAGAGGAT |
Microexon-tag Amino Acid seq | RENENDPHLFSCIISKGNIRVKEIHHFTQDDLMTED |
Transcript ID | Zm00001d002413_T002 |
Gene ID | Zm.9050 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Zm00001d002413_T002 MSLSMKDLDTAFHGAGQKDGLMVWRIENFKPVPVPTSLHGKFYMGDSYIILKTTALKNGSFRHDIHYWLGKDTSQDEAGT AAILTVELDAALGGRAVQYRESQGNETERFLSYFRPCIMPQSGGVVSGFNHVEVNDQKHVTRLYVCRGKHVVHVKEVPFT RSSLNHEDIFILDTKSKIFQFNGSNSCIQERAKALEVVQYIRDTFHEGKCEVAGVEDGKLMADAEAGEFWALFGGFAPLP KKTLSEDNGEDKEIIIKLMCINQGKLEQINFESLARELLEPNKCYLLDCGAEIYVWMGRSASLQERKGASKIAEKLLIDA SRTKSHVIKVIEGFETVTFKSKFIEWPPTPDLKLSSEDGRVKVAALLKSQGLDVKGLMKTAPVKEEPRPYIDCTGHLQVW RVNGNGKTLLSCADQSKFYTGDCYIFQYTYSGDDKEECLIGTWFGKRSIEVERVSALSLASKMVQASKFQAIQARLYEGK EPIQFFVIFQSFQLFKGGLSSGYKNFVVENDIVDDTYSEGGIALFRIQGSGSENMQALQVDPLASSLNSSYCYILHNGNT VFTWIGNVTTSLDHDLVERQLDVIKPELPSRSLKEGRETDQFWEVLGGKSKYPNQKVERENENDPHLFSCIISKGNIRVK EIHHFTQDDLMTEDVFILDCHSDIFVWVGQKVDTKVKSQAMDIGEKFLVHDFLMEKLSRETPIFIVSEGSEPQFFTRFFN WDSTKSLVHGSSYQRKLGVLKGGAPPTVDKPKRRTPAFTGRSSGQDKSHRSRSMSTSPDRPRVRGRSPAFNMLTSAFENT SNTRNLSTPPPVVRKPFSKSGCPEHSRVSPKKSAISSLTRSFEGHMKSTIPKSVKVSPELEKATQEEGATSGANENKQED DEGRVIYPYERLTTTAEDPAPDIDVTKRETYLSSAEFKDKFNMIRAEFYKLPKWKQSKLKSCVQLF* |
CDS seq | >Zm00001d002413_T002 ATGTCACTATCTATGAAGGATTTGGACACGGCCTTCCATGGAGCTGGACAAAAGGACGGTTTGATGGTATGGCGTATTGA GAATTTTAAGCCAGTTCCTGTGCCAACATCATTACATGGAAAATTTTATATGGGTGATTCATATATCATCTTGAAGACAA CAGCTTTAAAAAATGGTTCCTTTCGCCATGACATCCATTATTGGCTTGGTAAAGACACTAGTCAGGATGAGGCTGGAACT GCTGCAATTTTAACTGTGGAGCTTGATGCTGCGCTTGGAGGACGTGCTGTCCAGTACCGGGAATCACAAGGCAATGAAAC TGAAAGGTTTCTCTCATATTTTAGGCCTTGCATCATGCCACAATCAGGAGGGGTAGTTTCTGGGTTCAACCATGTAGAAG TCAATGATCAGAAGCATGTTACCCGATTATATGTGTGCCGAGGAAAACATGTTGTCCATGTTAAAGAGGTTCCTTTTACT CGTTCATCCCTTAACCATGAGGACATATTTATTTTGGATACCAAGTCAAAAATTTTCCAGTTCAATGGTTCTAACTCATG CATTCAGGAGAGAGCAAAAGCTCTTGAAGTTGTACAGTATATCAGAGATACTTTCCATGAGGGCAAGTGTGAAGTTGCAG GGGTTGAGGATGGAAAATTGATGGCTGATGCAGAAGCTGGTGAATTTTGGGCTTTGTTTGGTGGCTTCGCTCCTCTTCCA AAGAAGACACTTTCAGAGGATAACGGGGAAGACAAGGAAATCATCATCAAATTGATGTGCATCAACCAAGGAAAATTGGA GCAAATTAATTTTGAATCCTTGGCGCGTGAGTTACTTGAGCCAAACAAATGCTACTTGCTTGACTGTGGTGCTGAAATAT ATGTATGGATGGGCAGAAGTGCTTCTTTGCAAGAAAGAAAGGGCGCGAGCAAAATTGCTGAGAAACTACTCATTGATGCT AGTCGAACAAAATCACATGTTATCAAAGTGATCGAGGGATTCGAGACAGTCACGTTCAAGTCAAAATTTATTGAGTGGCC ACCCACACCTGATTTGAAGTTATCATCTGAGGATGGAAGAGTCAAAGTTGCAGCCCTCCTCAAATCTCAAGGATTAGATG TTAAAGGCTTGATGAAAACTGCACCTGTAAAAGAAGAACCCCGGCCTTACATTGATTGCACAGGTCATTTGCAGGTATGG AGGGTTAATGGAAATGGCAAGACTCTTCTTTCATGTGCTGACCAATCAAAATTTTACACTGGAGATTGTTACATTTTTCA ATACACATATAGTGGAGATGATAAGGAGGAATGTCTTATTGGAACTTGGTTCGGGAAGAGAAGCATTGAGGTGGAGAGGG TTTCAGCGTTGTCACTGGCTAGCAAGATGGTTCAGGCTTCCAAGTTCCAAGCTATCCAGGCCCGACTTTATGAAGGGAAA GAACCAATTCAGTTCTTTGTCATATTTCAAAGTTTTCAACTATTCAAGGGTGGACTTAGCTCTGGATACAAGAACTTTGT TGTTGAAAATGATATTGTGGATGACACTTACTCTGAAGGTGGGATTGCCCTATTCCGGATTCAGGGTTCAGGATCAGAAA ACATGCAAGCACTTCAGGTAGATCCGCTGGCTTCGTCCTTAAACTCGTCCTATTGTTACATTCTACATAATGGAAACACA GTGTTCACATGGATTGGCAATGTTACGACCTCATTGGATCATGACTTGGTTGAGAGACAACTAGATGTAATTAAGCCAGA ATTGCCTTCCAGGTCACTAAAGGAGGGGAGAGAAACCGACCAATTTTGGGAAGTACTGGGCGGTAAATCCAAGTATCCAA ACCAAAAAGTTGAAAGAGAAAATGAAAATGACCCCCATCTTTTCTCATGCATCATATCCAAAGGCAATATAAGGGTCAAA GAAATACACCATTTTACTCAGGATGATCTGATGACAGAGGATGTTTTTATTCTTGATTGTCACTCAGACATATTTGTTTG GGTTGGCCAGAAGGTGGATACCAAAGTGAAATCACAAGCTATGGATATTGGAGAGAAATTTCTTGTTCATGATTTCCTTA TGGAAAAACTATCACGAGAAACACCAATATTCATTGTGTCAGAGGGTAGCGAGCCACAATTTTTTACTAGATTCTTCAAT TGGGACTCTACAAAATCTCTTGTGCATGGCAGTTCATACCAAAGGAAGCTTGGTGTCCTAAAGGGTGGAGCACCTCCAAC AGTGGATAAACCAAAACGACGAACACCAGCATTTACAGGAAGAAGTTCAGGACAAGATAAATCTCATCGTTCAAGAAGCA TGTCCACTAGCCCAGATCGTCCACGTGTTCGTGGAAGGTCTCCAGCCTTCAATATGTTAACTTCTGCCTTTGAGAACACG AGCAATACCAGGAACCTTTCCACCCCTCCCCCTGTTGTGAGAAAGCCTTTCTCAAAATCTGGATGTCCTGAACACTCAAG GGTGTCACCCAAAAAATCAGCTATCAGTTCCCTCACCAGGTCTTTTGAAGGTCACATGAAAAGTACAATACCAAAATCAG TAAAAGTGAGCCCTGAGCTAGAGAAGGCGACACAGGAAGAAGGTGCCACAAGCGGTGCAAACGAAAACAAGCAAGAAGAT GACGAAGGGCGTGTGATCTACCCATATGAACGTCTGACAACGACAGCAGAAGATCCTGCCCCTGACATCGACGTGACCAA ACGAGAGACCTACTTATCGTCAGCCGAGTTCAAAGACAAATTCAACATGATAAGGGCAGAGTTCTACAAGCTTCCCAAGT GGAAGCAGAGCAAATTGAAGTCTTGTGTCCAACTTTTTTAG |