
Microexon ID | Zm_10:141896598-141896608:- |
Species | Zea mays | Coordinates | 10:141896598..141896608 |
Microexon Cluster ID | MEP27 |
Size | 11 |
Phase | 1 |
Pfam Domain Motif | Gelsolin |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,11,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | MRRGADRYTGWMAGWGATCCYCAYYTGTTYDCWTKYWCWTTYWMTAAAGGRAADYTKRAGGTKRMRGARRTHTACAAYTTYWCYCARGATGAYYTGWTGACWGARGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GCAATTTAAGG |
Microexon Amino Acid seq | GNLR |
Microexon-tag DNA Seq | AGAGAAAATGAAAGTGATCCCCATCTTTTCTCGTGCATCATATCCAAAGGCAATTTAAGGGTTAAAGAAATACACCACTTTACTCAGGATGATCTTATGACAGAGGAT |
Microexon-tag Amino Acid Seq | RENESDPHLFSCIISKGNLRVKEIHHFTQDDLMTED |
Microexon-tag spanning region | 141896460-141896756 |
Microexon-tag prediction score | 0.9329 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Zm00001d026249_T002x |
Reference Transcript ID | Zm00001d026249_T002 |
Gene ID | Zm00001d026249 |
Gene Name | NA |
Transcript ID | Zm00001d026249_T002 |
Protein ID | Zm00001d026249_P002 |
Gene ID | Zm00001d026249 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Zm00001d026249_P002 MGDSYIILKTTALKNGSFRHDIHYWLGKDTSQDEAGTAAILTVELDAALGGRAVQYRELQGNETERFLSYFRPCIMPQPG GIASGFNHVEVNDQEHVTRLYVCRGKHVVHVKEVPFTRSSLNHEDIFILDTKSKIFQFNGSSSCIQERAKALEVVQYIKD TFHEGKCEVAGVEDGKLMADVETGEFWALFGGFAPLPRKAPSEDNGEDKKIVIKLICINQGKLEQINFESLARELLEPNK CYLLDCGGEMYVWMGRNTSLQERKGASKAAEKLLIDDSRTKSHVIKLIEGFESVMFKSKFIEWPPTPDLKLSSEDGRGKV AALLKSQGLDVKGLMKVAPVKEELQPYIDCTGHLQVWRVNGNVKTFLSAADQSKFYTGDCYIFQYTYAGDDKEECLIGTW FGNRSVEVERVSALSLASKMVQASKFQAVQARLYEGKEPIQFFVIFQSLQVFKGGLSSGYKNFIAENNILDDTYSEGGIA LFRIQGSGSENMQAIQVDTLASSLNSSYCYILHDGNTVFTWTGNVTTSLDHDLVERQLDVIKPDLPSRSQKEGRETDQFW KLLGGKSKYPNQKIERENESDPHLFSCIISKGNLRVKEIHHFTQDDLMTEDVFVIDCHSDIFVWVGQEVDAKVKSQAMDI GEKFIVHDFLMEKLSRETPIFIVSEGSEPQFFTRFFNWDSAKSHMHGSSYQRKLAILKGGLPPSLEKPKRRTPAFTGRGF GQDKSQRSRSMSTSPDRPRVRGRSPAFNMLTSAFENTSNIRNLSTPPPAVKKLFPKSGGPEHSRVSPKKSAISALTSSFE APLKSTIPKSVKASPEPEKAIQEQGVVGGASENKLEDDEGRTIYPYERLTTTAEDPSPDIDLTKRESYLSSVEFKDKFNM TRAVFYKLPKWKQNKLKSDVQLF* |
CDS seq | >Zm00001d026249_T002 ATGGGTGATTCATATATCATCTTGAAGACAACAGCTTTAAAAAATGGTTCCTTTCGCCATGACATCCATTATTGGCTTGG TAAAGACACTAGTCAGGATGAGGCTGGAACTGCTGCAATTTTAACTGTGGAACTTGATGCTGCGCTTGGAGGACGTGCTG TCCAGTACCGAGAATTACAAGGCAATGAAACTGAAAGGTTTCTCTCATATTTTAGGCCATGCATCATGCCACAACCAGGA GGGATAGCTTCTGGGTTCAACCATGTAGAAGTCAATGACCAGGAGCATGTTACCCGCTTATATGTGTGTAGAGGGAAACA TGTTGTCCATGTTAAAGAGGTTCCTTTTACTCGTTCGTCCCTTAACCATGAGGACATATTTATTTTGGATACCAAGTCCA AAATTTTCCAGTTCAATGGTTCCAGCTCATGCATTCAAGAGAGAGCAAAAGCTCTTGAAGTTGTACAGTATATCAAAGAT ACTTTCCATGAGGGCAAGTGCGAAGTTGCAGGGGTTGAGGATGGAAAATTGATGGCTGATGTGGAAACTGGTGAATTTTG GGCTTTGTTTGGTGGTTTTGCTCCCCTTCCAAGAAAGGCACCTTCTGAGGATAATGGCGAAGACAAGAAAATTGTCATCA AATTGATATGCATCAACCAAGGAAAATTGGAGCAAATTAATTTTGAATCTTTGGCACGTGAGTTACTTGAGCCAAACAAA TGCTACTTGCTTGATTGTGGTGGTGAAATGTATGTTTGGATGGGAAGAAATACTTCTTTGCAAGAAAGAAAGGGTGCGAG CAAAGCTGCTGAGAAACTACTCATTGATGATAGCCGAACAAAATCACATGTTATCAAATTGATCGAGGGATTCGAGTCAG TCATGTTCAAATCAAAATTTATCGAGTGGCCACCCACACCTGATTTGAAGTTATCATCTGAGGATGGAAGGGGCAAAGTT GCAGCTCTCCTCAAAAGTCAAGGATTAGATGTTAAAGGCTTGATGAAAGTTGCACCTGTAAAAGAAGAACTCCAGCCTTA CATTGATTGTACAGGTCATTTGCAGGTATGGAGGGTGAATGGAAATGTCAAGACTTTTCTTTCAGCTGCTGACCAATCAA AATTTTACACTGGAGATTGTTACATTTTTCAATACACATATGCTGGAGATGACAAAGAGGAATGTCTTATCGGAACTTGG TTCGGGAACAGAAGCGTTGAGGTGGAGAGGGTGTCAGCGCTGTCATTGGCTAGCAAGATGGTTCAGGCTTCAAAGTTCCA AGCTGTCCAGGCTCGGCTTTATGAAGGGAAAGAACCAATACAGTTCTTTGTCATATTTCAAAGTCTTCAAGTGTTCAAGG GTGGCCTTAGCTCTGGATACAAGAACTTTATTGCTGAAAATAATATTTTGGATGACACTTACTCTGAAGGTGGGATTGCC CTATTTCGGATTCAAGGTTCAGGATCAGAAAACATGCAAGCAATTCAAGTAGATACACTGGCTTCGTCCTTAAACTCGTC CTATTGTTACATTCTCCACGATGGAAACACTGTGTTCACATGGACTGGCAATGTTACGACCTCATTAGATCATGACTTGG TTGAGAGGCAGCTAGATGTCATTAAGCCAGATCTACCTTCCAGGTCACAAAAGGAGGGGAGAGAAACCGACCAATTCTGG AAACTACTGGGTGGTAAATCCAAGTATCCAAACCAAAAAATTGAAAGAGAAAATGAAAGTGATCCCCATCTTTTCTCGTG CATCATATCCAAAGGCAATTTAAGGGTTAAAGAAATACACCACTTTACTCAGGATGATCTTATGACAGAGGATGTTTTTG TTATTGATTGTCACTCAGACATATTTGTTTGGGTTGGCCAGGAGGTGGATGCCAAAGTGAAATCACAAGCTATGGATATT GGAGAGAAATTTATTGTTCATGATTTTCTTATGGAAAAACTATCACGAGAAACACCAATATTCATTGTGTCAGAAGGCAG CGAGCCACAATTTTTTACTAGATTCTTCAATTGGGACTCTGCAAAATCTCATATGCATGGCAGTTCATACCAGAGGAAGC TTGCTATCCTAAAGGGTGGATTACCTCCATCACTAGAAAAACCAAAGCGACGAACACCAGCATTTACGGGAAGAGGTTTT GGACAAGATAAATCTCAGCGTTCAAGAAGCATGTCCACTAGTCCGGATCGTCCACGTGTTCGGGGAAGGTCTCCAGCCTT CAATATGTTAACTTCTGCCTTTGAGAACACAAGCAATATCAGGAACCTTTCCACCCCTCCTCCAGCTGTGAAAAAGCTTT TCCCAAAATCTGGAGGTCCTGAACACTCAAGGGTATCACCCAAAAAATCAGCTATCAGTGCCCTCACCAGCTCTTTTGAA GCACCCCTAAAAAGTACAATACCAAAATCGGTAAAAGCGAGCCCTGAGCCAGAGAAGGCGATACAGGAGCAAGGTGTCGT AGGCGGTGCAAGTGAAAACAAACTAGAAGACGACGAAGGCCGCACGATCTACCCATATGAACGTCTAACAACCACAGCTG AAGATCCTTCCCCTGACATTGATTTAACCAAACGAGAGTCCTACTTATCGTCTGTTGAGTTCAAAGACAAATTCAACATG ACAAGGGCGGTGTTCTACAAGCTCCCTAAGTGGAAGCAGAACAAGTTGAAATCTGATGTCCAGCTTTTTTAG |
Microexon DNA seq | GCAATTTAAGG |
Microexon Amino Acid seq | GNLR |
Microexon-tag DNA Seq | AGAGAAAATGAAAGTGATCCCCATCTTTTCTCGTGCATCATATCCAAAGGCAATTTAAGGGTTAAAGAAATACACCACTTTACTCAGGATGATCTTATGACAGAGGAT |
Microexon-tag Amino Acid seq | RENESDPHLFSCIISKGNLRVKEIHHFTQDDLMTED |
Transcript ID | Zm.8117.1 |
Gene ID | Zm.8117 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Zm.8117.1 MSVSMKDLDPAFHGAGQKDGLVVWRIENFKPVPVPTSSHGKFYMGDSYIILKTTALKNGSFRHDIHYWLGKDTSQDEAGT AAILTVELDAALGGRAVQYRELQGNETERFLSYFRPCIMPQPGGIASGFNHVEVNDQEHVTRLYVCRGKHVVHVKEVPFT RSSLNHEDIFILDTKSKIFQFNGSSSCIQERAKALEVVQYIKDTFHEGKCEVAGVEDGKLMADVETGEFWALFGGFAPLP RKAPSEDNGEDKKIVIKLICINQGKLEQINFESLARELLEPNKCYLLDCGGEMYVWMGRNTSLQERKGASKAAEKLLIDD SRTKSHVIKLIEGFESVMFKSKFIEWPPTPDLKLSSEDGRGKVAALLKSQGLDVKGLMKVAPVKEELQPYIDCTGHLQVW RVNGNVKTFLSAADQSKFYTGDCYIFQYTYAGDDKEECLIGTWFGNRSVEVERVSALSLASKMVQASKFQAVQARLYEGK EPIQFFVIFQSLQVFKGGLSSGYKNFIAENNILDDTYSEGGIALFRIQGSGSENMQAIQVDTLASSLNSSYCYILHDGNT VFTWTGNVTTSLDHDLVERQLDVIKPDLPSRSQKEGRETDQFWKLLGGKSKYPNQKIERENESDPHLFSCIISKGNLRVK EIHHFTQDDLMTEDVFVIDCHSDIFVWVGQEVDAKVKSQAMDIGEKFIVHDFLMEKLSRETPIFIVSEGSEPQFFTRFFN WDSAKSHMHGSSYQRKLAILKGGLPPSLEKPKRRTPAFTGRGFGQDKSQRSRSMSTSPDRPRVRGRSPAFNMLTSAFENT SNIRNLSTPPPAVKKLFPKSGGPEHSRVSPKKSAISALTSSFEAPLKSTIPKSVKASPEPEKAIQEQGVVGGASENKLED DEGRTIYPYERLTTTAEDPSPDIDLTKRESYLSSVEFKDKFNMTRAVFYKLPKWKQNKLKSDVQLF* |
CDS seq | >Zm.8117.1 ATGTCAGTGTCTATGAAGGATTTGGATCCTGCCTTCCACGGAGCTGGGCAAAAGGATGGTCTCGTGGTATGGCGTATTGA GAATTTTAAGCCTGTTCCTGTGCCAACATCATCACACGGAAAATTTTATATGGGTGATTCATATATCATCTTGAAGACAA CAGCTTTAAAAAATGGTTCCTTTCGCCATGACATCCATTATTGGCTTGGTAAAGACACTAGTCAGGATGAGGCTGGAACT GCTGCAATTTTAACTGTGGAACTTGATGCTGCGCTTGGAGGACGTGCTGTCCAGTACCGAGAATTACAAGGCAATGAAAC TGAAAGGTTTCTCTCATATTTTAGGCCATGCATCATGCCACAACCAGGAGGGATAGCTTCTGGGTTCAACCATGTAGAAG TCAATGACCAGGAGCATGTTACCCGCTTATATGTGTGTAGAGGGAAACATGTTGTCCATGTTAAAGAGGTTCCTTTTACT CGTTCGTCCCTTAACCATGAGGACATATTTATTTTGGATACCAAGTCCAAAATTTTCCAGTTCAATGGTTCCAGCTCATG CATTCAAGAGAGAGCAAAAGCTCTTGAAGTTGTACAGTATATCAAAGATACTTTCCATGAGGGCAAGTGCGAAGTTGCAG GGGTTGAGGATGGAAAATTGATGGCTGATGTGGAAACTGGTGAATTTTGGGCTTTGTTTGGTGGTTTTGCTCCCCTTCCA AGAAAGGCACCTTCTGAGGATAATGGCGAAGACAAGAAAATTGTCATCAAATTGATATGCATCAACCAAGGAAAATTGGA GCAAATTAATTTTGAATCTTTGGCACGTGAGTTACTTGAGCCAAACAAATGCTACTTGCTTGATTGTGGTGGTGAAATGT ATGTTTGGATGGGAAGAAATACTTCTTTGCAAGAAAGAAAGGGTGCGAGCAAAGCTGCTGAGAAACTACTCATTGATGAT AGCCGAACAAAATCACATGTTATCAAATTGATCGAGGGATTCGAGTCAGTCATGTTCAAATCAAAATTTATCGAGTGGCC ACCCACACCTGATTTGAAGTTATCATCTGAGGATGGAAGGGGCAAAGTTGCAGCTCTCCTCAAAAGTCAAGGATTAGATG TTAAAGGCTTGATGAAAGTTGCACCTGTAAAAGAAGAACTCCAGCCTTACATTGATTGTACAGGTCATTTGCAGGTATGG AGGGTGAATGGAAATGTCAAGACTTTTCTTTCAGCTGCTGACCAATCAAAATTTTACACTGGAGATTGTTACATTTTTCA ATACACATATGCTGGAGATGACAAAGAGGAATGTCTTATCGGAACTTGGTTCGGGAACAGAAGCGTTGAGGTGGAGAGGG TGTCAGCGCTGTCATTGGCTAGCAAGATGGTTCAGGCTTCAAAGTTCCAAGCTGTCCAGGCTCGGCTTTATGAAGGGAAA GAACCAATACAGTTCTTTGTCATATTTCAAAGTCTTCAAGTGTTCAAGGGTGGCCTTAGCTCTGGATACAAGAACTTTAT TGCTGAAAATAATATTTTGGATGACACTTACTCTGAAGGTGGGATTGCCCTATTTCGGATTCAAGGTTCAGGATCAGAAA ACATGCAAGCAATTCAAGTAGATACACTGGCTTCGTCCTTAAACTCGTCCTATTGTTACATTCTCCACGATGGAAACACT GTGTTCACATGGACTGGCAATGTTACGACCTCATTAGATCATGACTTGGTTGAGAGGCAGCTAGATGTCATTAAGCCAGA TCTACCTTCCAGGTCACAAAAGGAGGGGAGAGAAACCGACCAATTCTGGAAACTACTGGGTGGTAAATCCAAGTATCCAA ACCAAAAAATTGAAAGAGAAAATGAAAGTGATCCCCATCTTTTCTCGTGCATCATATCCAAAGGCAATTTAAGGGTTAAA GAAATACACCACTTTACTCAGGATGATCTTATGACAGAGGATGTTTTTGTTATTGATTGTCACTCAGACATATTTGTTTG GGTTGGCCAGGAGGTGGATGCCAAAGTGAAATCACAAGCTATGGATATTGGAGAGAAATTTATTGTTCATGATTTTCTTA TGGAAAAACTATCACGAGAAACACCAATATTCATTGTGTCAGAAGGCAGCGAGCCACAATTTTTTACTAGATTCTTCAAT TGGGACTCTGCAAAATCTCATATGCATGGCAGTTCATACCAGAGGAAGCTTGCTATCCTAAAGGGTGGATTACCTCCATC ACTAGAAAAACCAAAGCGACGAACACCAGCATTTACGGGAAGAGGTTTTGGACAAGATAAATCTCAGCGTTCAAGAAGCA TGTCCACTAGTCCGGATCGTCCACGTGTTCGGGGAAGGTCTCCAGCCTTCAATATGTTAACTTCTGCCTTTGAGAACACA AGCAATATCAGGAACCTTTCCACCCCTCCTCCAGCTGTGAAAAAGCTTTTCCCAAAATCTGGAGGTCCTGAACACTCAAG GGTATCACCCAAAAAATCAGCTATCAGTGCCCTCACCAGCTCTTTTGAAGCACCCCTAAAAAGTACAATACCAAAATCGG TAAAAGCGAGCCCTGAGCCAGAGAAGGCGATACAGGAGCAAGGTGTCGTAGGCGGTGCAAGTGAAAACAAACTAGAAGAC GACGAAGGCCGCACGATCTACCCATATGAACGTCTAACAACCACAGCTGAAGATCCTTCCCCTGACATTGATTTAACCAA ACGAGAGTCCTACTTATCGTCTGTTGAGTTCAAAGACAAATTCAACATGACAAGGGCGGTGTTCTACAAGCTCCCTAAGT GGAAGCAGAACAAGTTGAAATCTGATGTCCAGCTTTTTTAG |