
Microexon ID | Zm_1:62735074-62735084:+ |
Species | Zea mays | Coordinates | 1:62735074..62735084 |
Microexon Cluster ID | MEP27 |
Size | 11 |
Phase | 1 |
Pfam Domain Motif | Gelsolin |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,11,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | MRRGADRYTGWMAGWGATCCYCAYYTGTTYDCWTKYWCWTTYWMTAAAGGRAADYTKRAGGTKRMRGARRTHTACAAYTTYWCYCARGATGAYYTGWTGACWGARGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GGAAGCTGGAG |
Microexon Amino Acid seq | GKLE |
Microexon-tag DNA Seq | GATGTTGTTATTAGAGAGCCTCATTTGTATACCTTCTCTCTGAGGAATGGGAAGCTGGAGGTTACTGAAATTTTCAATTTTTCACAAGATGATCTGTTGACCGAAGAC |
Microexon-tag Amino Acid Seq | DVVIREPHLYTFSLRNGKLEVTEIFNFSQDDLLTED |
Microexon-tag spanning region | 62734890-62735221 |
Microexon-tag prediction score | 0.9489 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Zm00001d029215_T001x |
Reference Transcript ID | Zm00001d029215_T001 |
Gene ID | Zm00001d029215 |
Gene Name | NA |
Transcript ID | Zm00001d029215_T001 |
Protein ID | Zm00001d029215_P001 |
Gene ID | Zm00001d029215 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Zm00001d029215_P001 MSTAKVVLEPAFQGAGHKPGTEIWRIEDFKPVALPKSDYGKFYCGDSYIVLQTTCKGGAFIFDIHFWIGKDSSQDEAGTA AIKTVELDSMLGGRAVQHREPQCYESDKFLSYFKPCIIPMEGGFASGFKKPEVDKFETRLYICKGKRAIRVKEVPFSRSS LNHDDVFILDTENKIYQFNGANSNIQERAKALEVIQHLKEEYHDGVCAVAIVDDGKLQAESDSGEFWVLFGGFAPIGKKA ISDDDVVLETTSPKLFSISNGQLKLEDAVLTKSILENTKCFLLDCGAELFVWVGRVTQVEDRKAASAAVEKYIIKENRPK TTRITQVIQGYENHTFKSKFESWPVSNTSGSASTEEGRGKVTALLKQKGVDVKGISKTSVPVNDEVPPLLDGGGKLEVWC IDGSAKTALPKEELGKFYSGDCYVVLYTYHSAEKKEEFYLAYWIGKNSVQEDQEAAFQIANTTFNSLKGRPVQGRIYQGK EPPQFVAIFQPMVILKGGTSSGYKKFVEEKGLKDETYCSDGTALIQISGTAVHNNKTLQVDAVATSLSSTDCFVLQAKNS MFIWNGNASSFEQQQWAAKVAEFLKTGVAVKHCKEGTESSIFWSSIGGKQSYTNRNAAPDVVIREPHLYTFSLRNGKLEV TEIFNFSQDDLLTEDMMILDTHCEVFVWMGQCVETKEKQKAFDIGQKYVQHAVAFEGISPDVPLYKVNEGNEPCFFRTYF SWDSARSVIHGNSFEKKLSVLFGMRSEGGNKGSGDGGPTQRASALAALSSALNPSSQGKQSDEKPTSSDDSEHTQRASAM AALSSALNPSTKPSSTQTQSHSGQGSQRAAAVAALSNVLTAEGSHSPRHSRSSPTADADKTELVPTSPHQLETGTAEDVR TEPDVSQEQTAKENGGQTTFSYERLISKSTDPVSGINNKRRETYLVDSEFETVFGMTKEEFYEQPRWKQELQKKKADLF* |
CDS seq | >Zm00001d029215_T001 ATGTCGACTGCGAAAGTGGTGCTTGAGCCTGCATTTCAAGGAGCTGGCCATAAACCAGGGACAGAGATATGGAGGATCGA GGATTTCAAGCCAGTCGCTTTGCCAAAATCAGACTATGGCAAATTCTACTGTGGAGATTCTTATATAGTTCTGCAGACGA CATGTAAAGGAGGTGCTTTTATTTTTGACATCCATTTCTGGATCGGAAAAGATTCCAGCCAGGATGAAGCTGGAACTGCG GCGATCAAGACAGTTGAGCTTGACAGCATGCTCGGGGGCCGTGCGGTGCAGCACAGGGAGCCACAGTGCTACGAGTCTGA TAAATTCCTCTCGTATTTTAAACCGTGCATCATACCCATGGAGGGCGGCTTTGCTTCTGGGTTCAAAAAGCCAGAAGTGG ACAAGTTTGAAACACGTCTATATATCTGCAAAGGGAAGAGAGCTATCAGAGTTAAAGAGGTTCCATTTTCTCGTTCATCG TTGAACCATGATGATGTCTTTATCTTGGATACTGAGAACAAAATATATCAATTCAACGGTGCAAACTCCAACATCCAAGA AAGAGCCAAAGCCTTGGAAGTGATCCAGCATTTAAAGGAGGAATACCATGACGGAGTGTGCGCTGTTGCAATCGTCGATG ATGGGAAACTGCAAGCAGAATCAGATTCAGGAGAATTCTGGGTCCTTTTTGGAGGTTTTGCGCCAATAGGGAAAAAAGCA ATAAGTGATGATGATGTTGTTCTTGAAACTACATCACCAAAGCTTTTCAGTATCAGTAACGGCCAACTGAAGTTAGAAGA CGCTGTCCTTACAAAATCAATTTTGGAGAACACCAAGTGCTTTTTACTTGACTGCGGGGCTGAGCTATTCGTGTGGGTTG GTCGGGTAACACAGGTAGAGGACAGGAAAGCTGCCAGTGCAGCAGTTGAGAAATACATTATTAAAGAAAATAGACCAAAG ACAACAAGAATAACTCAAGTGATCCAAGGTTACGAGAATCATACGTTCAAGTCTAAGTTTGAGTCATGGCCTGTAAGTAA CACGTCAGGGAGTGCCAGCACGGAGGAAGGCCGAGGGAAAGTTACAGCACTCTTGAAGCAGAAAGGTGTTGATGTCAAAG GAATCTCAAAAACTAGTGTGCCAGTAAATGACGAAGTTCCTCCTTTGCTGGATGGCGGTGGAAAGCTTGAGGTTTGGTGT ATTGATGGCAGTGCCAAGACTGCTCTTCCAAAGGAAGAACTTGGAAAATTCTACAGCGGAGACTGCTATGTTGTTCTCTA CACTTATCATTCTGCTGAAAAAAAAGAAGAGTTCTATCTAGCTTATTGGATTGGGAAAAATAGTGTACAGGAAGATCAAG AGGCGGCTTTTCAAATAGCTAATACAACTTTTAATTCTTTGAAAGGAAGACCTGTCCAGGGTCGTATTTATCAAGGAAAA GAGCCACCACAATTTGTGGCTATTTTCCAGCCAATGGTTATTCTTAAGGGTGGTACTAGCTCTGGTTATAAGAAATTTGT AGAAGAGAAGGGTCTGAAAGATGAAACGTATTGTTCTGATGGCACTGCTCTCATTCAAATTTCTGGAACAGCGGTTCATA ACAATAAAACGCTTCAAGTTGATGCGGTCGCAACATCCTTGAGTTCCACAGATTGTTTTGTTTTGCAAGCTAAAAACTCG ATGTTTATATGGAATGGGAATGCAAGTTCTTTTGAACAACAACAGTGGGCTGCTAAAGTTGCTGAATTTCTGAAGACCGG TGTTGCTGTCAAGCATTGCAAGGAGGGCACTGAGAGCTCTATTTTCTGGTCTTCTATTGGTGGAAAGCAGAGTTATACAA ATAGAAATGCTGCACCTGATGTTGTTATTAGAGAGCCTCATTTGTATACCTTCTCTCTGAGGAATGGGAAGCTGGAGGTT ACTGAAATTTTCAATTTTTCACAAGATGATCTGTTGACCGAAGACATGATGATACTTGATACACACTGTGAGGTTTTTGT TTGGATGGGTCAGTGTGTGGAGACAAAAGAAAAACAGAAAGCATTTGACATTGGCCAGAAATACGTACAACATGCCGTGG CCTTTGAAGGTATTTCTCCTGATGTGCCTCTCTATAAAGTCAATGAAGGGAATGAACCTTGCTTCTTCAGGACATACTTC TCCTGGGATAGCGCACGATCCGTGATTCATGGAAACTCTTTTGAGAAGAAACTTTCAGTTCTTTTCGGAATGCGTTCAGA GGGTGGCAATAAGGGCTCAGGTGATGGTGGGCCAACTCAAAGGGCATCAGCCTTGGCCGCTCTTTCATCTGCATTGAATC CATCGTCGCAAGGAAAACAGTCAGATGAGAAGCCCACAAGCTCAGATGACAGCGAGCATACTCAACGAGCTTCAGCAATG GCTGCCTTGTCCTCTGCCCTTAATCCATCGACAAAACCTAGCAGCACACAGACACAATCTCATTCAGGTCAAGGGTCTCA AAGAGCCGCTGCTGTTGCAGCACTGTCCAATGTTTTGACTGCAGAGGGATCTCATAGCCCCCGCCACAGTAGGTCGTCCC CAACAGCAGATGCAGACAAGACTGAATTAGTTCCTACTTCTCCCCATCAATTAGAAACAGGGACTGCAGAAGATGTCCGA ACAGAGCCTGATGTCTCACAGGAACAAACAGCTAAAGAAAATGGAGGCCAGACAACCTTTAGCTATGAACGATTGATATC AAAGTCCACTGACCCTGTTAGTGGGATAAACAACAAGCGCAGAGAGACATATTTGGTGGACAGTGAATTCGAGACCGTAT TTGGCATGACTAAGGAGGAGTTCTACGAGCAGCCAAGGTGGAAGCAAGAGTTGCAGAAAAAGAAAGCCGATCTTTTCTGA |
Microexon DNA seq | GGAAGCTGGAG |
Microexon Amino Acid seq | GKLE |
Microexon-tag DNA Seq | GATGTTGTTATTAGAGAGCCTCATTTGTATACCTTCTCTCTGAGGAATGGGAAGCTGGAGGTTACTGAAATTTTCAATTTTTCACAAGATGATCTGTTGACCGAAGAC |
Microexon-tag Amino Acid seq | DVVIREPHLYTFSLRNGKLEVTEIFNFSQDDLLTED |
Transcript ID | Zm00001d029215_T001 |
Gene ID | Zm.1543 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Zm00001d029215_T001 MSTAKVVLEPAFQGAGHKPGTEIWRIEDFKPVALPKSDYGKFYCGDSYIVLQTTCKGGAFIFDIHFWIGKDSSQDEAGTA AIKTVELDSMLGGRAVQHREPQCYESDKFLSYFKPCIIPMEGGFASGFKKPEVDKFETRLYICKGKRAIRVKEVPFSRSS LNHDDVFILDTENKIYQFNGANSNIQERAKALEVIQHLKEEYHDGVCAVAIVDDGKLQAESDSGEFWVLFGGFAPIGKKA ISDDDVVLETTSPKLFSISNGQLKLEDAVLTKSILENTKCFLLDCGAELFVWVGRVTQVEDRKAASAAVEKYIIKENRPK TTRITQVIQGYENHTFKSKFESWPVSNTSGSASTEEGRGKVTALLKQKGVDVKGISKTSVPVNDEVPPLLDGGGKLEVWC IDGSAKTALPKEELGKFYSGDCYVVLYTYHSAEKKEEFYLAYWIGKNSVQEDQEAAFQIANTTFNSLKGRPVQGRIYQGK EPPQFVAIFQPMVILKGGTSSGYKKFVEEKGLKDETYCSDGTALIQISGTAVHNNKTLQVDAVATSLSSTDCFVLQAKNS MFIWNGNASSFEQQQWAAKVAEFLKTGVAVKHCKEGTESSIFWSSIGGKQSYTNRNAAPDVVIREPHLYTFSLRNGKLEV TEIFNFSQDDLLTEDMMILDTHCEVFVWMGQCVETKEKQKAFDIGQKYVQHAVAFEGISPDVPLYKVNEGNEPCFFRTYF SWDSARSVIHGNSFEKKLSVLFGMRSEGGNKGSGDGGPTQRASALAALSSALNPSSQGKQSDEKPTSSDDSEHTQRASAM AALSSALNPSTKPSSTQTQSHSGQGSQRAAAVAALSNVLTAEGSHSPRHSRSSPTADADKTELVPTSPHQLETGTAEDVR TEPDVSQEQTAKENGGQTTFSYERLISKSTDPVSGINNKRRETYLVDSEFETVFGMTKEEFYEQPRWKQELQKKKADLF* |
CDS seq | >Zm00001d029215_T001 ATGTCGACTGCGAAAGTGGTGCTTGAGCCTGCATTTCAAGGAGCTGGCCATAAACCAGGGACAGAGATATGGAGGATCGA GGATTTCAAGCCAGTCGCTTTGCCAAAATCAGACTATGGCAAATTCTACTGTGGAGATTCTTATATAGTTCTGCAGACGA CATGTAAAGGAGGTGCTTTTATTTTTGACATCCATTTCTGGATCGGAAAAGATTCCAGCCAGGATGAAGCTGGAACTGCG GCGATCAAGACAGTTGAGCTTGACAGCATGCTCGGGGGCCGTGCGGTGCAGCACAGGGAGCCACAGTGCTACGAGTCTGA TAAATTCCTCTCGTATTTTAAACCGTGCATCATACCCATGGAGGGCGGCTTTGCTTCTGGGTTCAAAAAGCCAGAAGTGG ACAAGTTTGAAACACGTCTATATATCTGCAAAGGGAAGAGAGCTATCAGAGTTAAAGAGGTTCCATTTTCTCGTTCATCG TTGAACCATGATGATGTCTTTATCTTGGATACTGAGAACAAAATATATCAATTCAACGGTGCAAACTCCAACATCCAAGA AAGAGCCAAAGCCTTGGAAGTGATCCAGCATTTAAAGGAGGAATACCATGACGGAGTGTGCGCTGTTGCAATCGTCGATG ATGGGAAACTGCAAGCAGAATCAGATTCAGGAGAATTCTGGGTCCTTTTTGGAGGTTTTGCGCCAATAGGGAAAAAAGCA ATAAGTGATGATGATGTTGTTCTTGAAACTACATCACCAAAGCTTTTCAGTATCAGTAACGGCCAACTGAAGTTAGAAGA CGCTGTCCTTACAAAATCAATTTTGGAGAACACCAAGTGCTTTTTACTTGACTGCGGGGCTGAGCTATTCGTGTGGGTTG GTCGGGTAACACAGGTAGAGGACAGGAAAGCTGCCAGTGCAGCAGTTGAGAAATACATTATTAAAGAAAATAGACCAAAG ACAACAAGAATAACTCAAGTGATCCAAGGTTACGAGAATCATACGTTCAAGTCTAAGTTTGAGTCATGGCCTGTAAGTAA CACGTCAGGGAGTGCCAGCACGGAGGAAGGCCGAGGGAAAGTTACAGCACTCTTGAAGCAGAAAGGTGTTGATGTCAAAG GAATCTCAAAAACTAGTGTGCCAGTAAATGACGAAGTTCCTCCTTTGCTGGATGGCGGTGGAAAGCTTGAGGTTTGGTGT ATTGATGGCAGTGCCAAGACTGCTCTTCCAAAGGAAGAACTTGGAAAATTCTACAGCGGAGACTGCTATGTTGTTCTCTA CACTTATCATTCTGCTGAAAAAAAAGAAGAGTTCTATCTAGCTTATTGGATTGGGAAAAATAGTGTACAGGAAGATCAAG AGGCGGCTTTTCAAATAGCTAATACAACTTTTAATTCTTTGAAAGGAAGACCTGTCCAGGGTCGTATTTATCAAGGAAAA GAGCCACCACAATTTGTGGCTATTTTCCAGCCAATGGTTATTCTTAAGGGTGGTACTAGCTCTGGTTATAAGAAATTTGT AGAAGAGAAGGGTCTGAAAGATGAAACGTATTGTTCTGATGGCACTGCTCTCATTCAAATTTCTGGAACAGCGGTTCATA ACAATAAAACGCTTCAAGTTGATGCGGTCGCAACATCCTTGAGTTCCACAGATTGTTTTGTTTTGCAAGCTAAAAACTCG ATGTTTATATGGAATGGGAATGCAAGTTCTTTTGAACAACAACAGTGGGCTGCTAAAGTTGCTGAATTTCTGAAGACCGG TGTTGCTGTCAAGCATTGCAAGGAGGGCACTGAGAGCTCTATTTTCTGGTCTTCTATTGGTGGAAAGCAGAGTTATACAA ATAGAAATGCTGCACCTGATGTTGTTATTAGAGAGCCTCATTTGTATACCTTCTCTCTGAGGAATGGGAAGCTGGAGGTT ACTGAAATTTTCAATTTTTCACAAGATGATCTGTTGACCGAAGACATGATGATACTTGATACACACTGTGAGGTTTTTGT TTGGATGGGTCAGTGTGTGGAGACAAAAGAAAAACAGAAAGCATTTGACATTGGCCAGAAATACGTACAACATGCCGTGG CCTTTGAAGGTATTTCTCCTGATGTGCCTCTCTATAAAGTCAATGAAGGGAATGAACCTTGCTTCTTCAGGACATACTTC TCCTGGGATAGCGCACGATCCGTGATTCATGGAAACTCTTTTGAGAAGAAACTTTCAGTTCTTTTCGGAATGCGTTCAGA GGGTGGCAATAAGGGCTCAGGTGATGGTGGGCCAACTCAAAGGGCATCAGCCTTGGCCGCTCTTTCATCTGCATTGAATC CATCGTCGCAAGGAAAACAGTCAGATGAGAAGCCCACAAGCTCAGATGACAGCGAGCATACTCAACGAGCTTCAGCAATG GCTGCCTTGTCCTCTGCCCTTAATCCATCGACAAAACCTAGCAGCACACAGACACAATCTCATTCAGGTCAAGGGTCTCA AAGAGCCGCTGCTGTTGCAGCACTGTCCAATGTTTTGACTGCAGAGGGATCTCATAGCCCCCGCCACAGTAGGTCGTCCC CAACAGCAGATGCAGACAAGACTGAATTAGTTCCTACTTCTCCCCATCAATTAGAAACAGGGACTGCAGAAGATGTCCGA ACAGAGCCTGATGTCTCACAGGAACAAACAGCTAAAGAAAATGGAGGCCAGACAACCTTTAGCTATGAACGATTGATATC AAAGTCCACTGACCCTGTTAGTGGGATAAACAACAAGCGCAGAGAGACATATTTGGTGGACAGTGAATTCGAGACCGTAT TTGGCATGACTAAGGAGGAGTTCTACGAGCAGCCAAGGTGGAAGCAAGAGTTGCAGAAAAAGAAAGCCGATCTTTTCTGA |