
Microexon ID | Vv_11:18178828-18178838:- |
Species | Vistis vinifera | Coordinates | 11:18178828..18178838 |
Microexon Cluster ID | MEP27 |
Size | 11 |
Phase | 1 |
Pfam Domain Motif | Gelsolin |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,11,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | MRRGADRYTGWMAGWGATCCYCAYYTGTTYDCWTKYWCWTTYWMTAAAGGRAADYTKRAGGTKRMRGARRTHTACAAYTTYWCYCARGATGAYYTGWTGACWGARGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GAAATTTGAAG |
Microexon Amino Acid seq | GNLK |
Microexon-tag DNA Seq | CGAGATGCTGAAAATGATCCTCACCTATTCTCATGCACTTTCTCAAAAGGAAATTTGAAGGTGACGGAGATATTCAATTTCACTCAGGATGATTTGATGACTGAAGAT |
Microexon-tag Amino Acid Seq | RDAENDPHLFSCTFSKGNLKVTEIFNFTQDDLMTED |
Microexon-tag spanning region | 18178440-18179024 |
Microexon-tag prediction score | 0.9695 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | VIT_11s0052g00670.t01x |
Reference Transcript ID | VIT_11s0052g00670.t01 |
Gene ID | VIT_11s0052g00670 |
Gene Name | NA |
Transcript ID | VIT_11s0052g00670.t01 |
Protein ID | VIT_11s0052g00670.t01 |
Gene ID | VIT_11s0052g00670 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >VIT_11s0052g00670.t01 MAVSMRDLDPAFQGAGQKAGIEIWRIENFRPMPVPKSSYGKFFTGDSYVILKTTALKNGALRHDIHYWLGKDTTQDEAGT AAVKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQPGGVASGFKHAEAEEHKTRLYVCKGKHVVHVKEVSFARS SLNHDDIFILDTKSKIFQFNGSNSSIQERAKALEVVQYIKDTYHDGKCEVASIEDGKLMADAETGEFWGFFGGFAPLPRK TANEDDKAVDSLPAKLFCILKGQAEPVQADSLTRELLDTNKCYILDCGVEVFVWMGRNTSLDERKSASSAAEELLRSLDR PKSHIIRVIEGFETVMFRSKFDMWPETTAVTVSEDGRGKVAALLKRQGVNVKGLLKAAPVKEEPQPYIDCTGNLQVWRVN GQEKTLLSASDQSKFYSGDCYIFQYSYPGEDKEEHLIGTWFGKQSVEEERTSAISLATKMVESLKFLPAQARIYEGNEPI QFFSIFQSFIVFKGGVSDGYKKYIAEKEVPDDTYTEDRVALFRVQGSGPDNMQAIQVEPVASSLNSSYCYILNSGSSVFN WSGNLTTPEDQELVERQLDVIKPNVQSKPQKEGSESEQFWEFLGGKSEYPSQKIARDAENDPHLFSCTFSKGNLKVTEIF NFTQDDLMTEDIFILDCHSEIFVWVGQQVDSKNRMHALTIGEKFLERDFLLEKLSHTAPIYIIMEGSEPPFFTRFFTWDS GKSAMQGNSFQRKLAIVKNGISPTPEKPKRRTPVSYGGRSSSLPEKSQRSRSMSFSPDRVRVRGRSPAFNALAANFENPN SRNLSTPPPMVRKLYPKSVTPDSSKLDSRSAAIAALSASFEQPAREPVVPKTPKVTEEAPKPKPKPETNSKEKAMSSRIE ALTIEEDVKEGEAEDEEGLPIYPYERLKTTSIEPVAEIDVTKRETYLSSEEFRQKFGMTKDAFYKLPKWKQNKLKMALQL F* |
CDS seq | >VIT_11s0052g00670.t01 ATGGCTGTTTCCATGAGAGATTTGGATCCAGCTTTCCAGGGAGCTGGGCAAAAAGCTGGAATTGAAATTTGGCGAATTGA GAACTTTCGTCCTATGCCTGTCCCAAAGTCCTCCTATGGAAAATTTTTCACAGGGGACTCCTATGTAATTTTGAAGACAA CTGCTTTAAAAAATGGGGCCTTACGGCATGATATCCATTATTGGCTGGGTAAAGATACCACTCAGGATGAGGCTGGTACC GCAGCTGTCAAGACAGTTGAATTGGATGCGGCTCTTGGAGGACGAGCAGTTCAGTATCGTGAAGTACAGGGCCATGAAAC GGAGAAGTTCCTTTCTTATTTTAAACCATGTATCATACCTCAACCTGGTGGAGTTGCATCTGGGTTTAAGCATGCTGAGG CTGAAGAGCACAAGACACGTTTGTATGTCTGCAAGGGAAAACATGTAGTTCATGTAAAAGAGGTTTCTTTTGCACGATCA TCACTCAATCATGATGATATTTTTATTCTAGATACGAAGTCTAAAATATTTCAATTTAATGGGTCTAACTCATCCATTCA AGAGAGGGCTAAAGCACTAGAAGTTGTTCAATACATTAAAGATACTTATCATGATGGAAAATGTGAAGTTGCTTCCATTG AGGATGGAAAGCTGATGGCTGATGCTGAAACTGGAGAATTCTGGGGTTTTTTTGGTGGTTTTGCTCCACTTCCAAGGAAA ACAGCCAATGAAGATGACAAAGCCGTGGATTCTCTTCCTGCTAAGCTGTTTTGCATTTTGAAGGGACAGGCAGAACCCGT CCAGGCTGATTCTTTGACAAGAGAGTTGCTAGATACAAATAAGTGTTATATTCTAGATTGTGGGGTGGAAGTTTTTGTGT GGATGGGGAGAAATACCTCTCTTGATGAAAGAAAAAGTGCTAGTTCAGCAGCAGAAGAATTACTCCGTAGCCTTGATCGG CCAAAATCTCACATAATCCGTGTAATCGAAGGATTTGAAACAGTAATGTTCCGGTCAAAGTTTGATATGTGGCCTGAGAC AACTGCTGTAACTGTATCTGAGGATGGTAGAGGCAAGGTGGCTGCACTTCTAAAACGCCAAGGGGTTAATGTTAAGGGTC TTTTGAAAGCTGCTCCTGTAAAAGAAGAACCTCAACCATACATTGATTGTACCGGAAATCTGCAGGTTTGGCGTGTAAAT GGCCAAGAGAAGACACTACTTTCAGCTTCTGACCAGTCAAAATTTTACAGTGGCGATTGCTACATCTTTCAGTATTCATA TCCTGGAGAAGATAAAGAGGAACACCTTATTGGCACATGGTTTGGGAAGCAGAGTGTCGAGGAAGAAAGAACTTCAGCTA TCTCACTGGCAACCAAGATGGTGGAGTCATTGAAGTTTCTTCCTGCTCAGGCTCGCATCTATGAAGGAAATGAACCGATC CAGTTCTTTTCAATATTTCAGAGCTTTATTGTTTTTAAGGGTGGTGTAAGTGATGGTTACAAGAAATATATTGCTGAGAA GGAAGTTCCAGATGACACATATACAGAAGACAGAGTCGCATTATTTCGAGTTCAGGGTTCTGGGCCTGATAACATGCAAG CAATTCAAGTTGAACCAGTTGCATCATCTTTGAATTCCTCGTACTGTTACATATTAAACAGTGGCTCCTCTGTTTTTAAT TGGTCTGGAAACCTTACGACCCCAGAAGATCAGGAGCTTGTTGAGAGGCAACTGGATGTGATAAAGCCAAATGTACAATC CAAACCACAAAAAGAAGGCTCGGAATCTGAACAATTTTGGGAATTTTTGGGAGGCAAATCTGAATACCCCAGTCAGAAGA TTGCACGAGATGCTGAAAATGATCCTCACCTATTCTCATGCACTTTCTCAAAAGGAAATTTGAAGGTGACGGAGATATTC AATTTCACTCAGGATGATTTGATGACTGAAGATATATTCATCCTGGATTGTCACTCGGAGATCTTTGTCTGGGTTGGGCA ACAAGTTGATTCCAAGAATAGAATGCATGCTTTAACCATCGGAGAGAAATTTCTTGAACGTGATTTTCTCCTAGAAAAAT TATCTCATACTGCTCCAATTTATATTATCATGGAAGGGAGTGAGCCACCTTTCTTCACACGTTTCTTCACATGGGACTCT GGAAAATCTGCAATGCAGGGAAACTCATTTCAAAGGAAACTTGCAATAGTGAAAAATGGGATTTCCCCTACTCCGGAAAA ACCCAAGAGAAGAACACCAGTATCATATGGAGGGAGATCTAGTAGTTTGCCAGAAAAATCACAACGGTCAAGAAGCATGT CTTTCAGCCCTGACCGAGTTCGGGTGAGGGGCAGGTCTCCAGCCTTCAATGCTCTAGCAGCTAACTTTGAGAACCCAAAT TCCAGGAACCTTTCGACTCCACCTCCAATGGTTAGAAAGCTCTATCCCAAATCTGTGACCCCAGATTCATCTAAACTGGA TTCCAGATCTGCAGCAATAGCAGCACTTTCTGCTAGTTTTGAACAACCGGCACGGGAGCCTGTTGTACCCAAAACTCCTA AAGTGACTGAAGAGGCACCAAAACCAAAACCAAAACCAGAAACAAACTCGAAAGAGAAAGCTATGAGCAGCAGGATAGAA GCCCTCACAATAGAGGAAGATGTAAAAGAGGGTGAAGCTGAAGATGAAGAGGGTCTTCCAATATACCCATATGAGCGTCT TAAAACAACATCCATAGAACCTGTTGCCGAAATTGATGTGACCAAGCGAGAGACTTACCTGTCTTCAGAGGAGTTCCGAC AGAAATTTGGAATGACAAAAGACGCCTTCTATAAGCTGCCCAAATGGAAACAAAACAAGCTGAAAATGGCCCTTCAGTTG TTCTGA |
Microexon DNA seq | GAAATTTGAAG |
Microexon Amino Acid seq | GNLK |
Microexon-tag DNA Seq | CGAGATGCTGAAAATGATCCTCACCTATTCTCATGCACTTTCTCAAAAGGAAATTTGAAGGTGACGGAGATATTCAATTTCACTCAGGATGATTTGATGACTGAAGAT |
Microexon-tag Amino Acid seq | RDAENDPHLFSCTFSKGNLKVTEIFNFTQDDLMTED |
Transcript ID | Vv.4460.1 |
Gene ID | Vv.4460 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Vv.4460.1 MAVSMRDLDPAFQGAGQKAGIEIWRIENFRPMPVPKSSYGKFFTGDSYVILKTTALKNGALRHDIHYWLGKDTTQDEAGT AAVKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQPGGVASGFKHAEAEEHKTRLYVCKGKHVVHVKEVSFARS SLNHDDIFILDTKSKIFQFNGSNSSIQERAKALEVVQYIKDTYHDGKCEVASIEDGKLMADAETGEFWGFFGGFAPLPRK TANEDDKAVDSLPAKLFCILKGQAEPVQADSLTRELLDTNKCYILDCGVEVFVWMGRNTSLDERKSASSAAEELLRSLDR PKSHIIRVIEGFETVMFRSKFDMWPETTAVTVSEDGRGKVAALLKRQGVNVKGLLKAAPVKEEPQPYIDCTGNLQVWRVN GQEKTLLSASDQSKFYSGDCYIFQYSYPGEDKEEHLIGTWFGKQSVEEERTSAISLATKMVESLKFLPAQARIYEGNEPI QFFSIFQSFIVFKGGVSDGYKKYIAEKEVPDDTYTEDRVALFRVQGSGPDNMQAIQVEPVASSLNSSYCYILNSGSSVFN WSGNLTTPEDQELVERQLDVIKPNVQSKPQKEGSESEQFWEFLGGKSEYPSQKIARDAENDPHLFSCTFSKGNLKVTEIF NFTQDDLMTEDIFILDCHSEIFVWVGQQVDSKNRMHALTIGEKFLERDFLLEKLSHTAPIYIIMEGSEPPFFTRFFTWDS GKSAMQGNSFQRKLAIVKNGISPTPEKPKRRTPVSYGGRSSSLPEKSQRSRSMSFSPDRVRVRGRSPAFNALAANFENPN SRNLSTPPPMVRKLYPKSVTPDSSKLDSRSAAIAALSASFEQPAREPVVPKTPKVTEEAPKPKPKPETNSKEKAMSSRIE ALTIEEDVKEGEAEDEEGLPIYPYERLKTTSIEPVAEIDVTKRETYLSSEEFRQKFGMTKDAFYKLPKWKQNKLKMALQL F* |
CDS seq | >Vv.4460.1 ATGGCTGTTTCCATGAGAGATTTGGATCCAGCTTTCCAGGGAGCTGGGCAAAAAGCTGGAATTGAAATTTGGCGAATTGA GAACTTTCGTCCTATGCCTGTCCCAAAGTCCTCCTATGGAAAATTTTTCACAGGGGACTCCTATGTAATTTTGAAGACAA CTGCTTTAAAAAATGGGGCCTTACGGCATGATATCCATTATTGGCTGGGTAAAGATACCACTCAGGATGAGGCTGGTACC GCAGCTGTCAAGACAGTTGAATTGGATGCGGCTCTTGGAGGACGAGCAGTTCAGTATCGTGAAGTACAGGGCCATGAAAC GGAGAAGTTCCTTTCTTATTTTAAACCATGTATCATACCTCAACCTGGTGGAGTTGCATCTGGGTTTAAGCATGCTGAGG CTGAAGAGCACAAGACACGTTTGTATGTCTGCAAGGGAAAACATGTAGTTCATGTAAAAGAGGTTTCTTTTGCACGATCA TCACTCAATCATGATGATATTTTTATTCTAGATACGAAGTCTAAAATATTTCAATTTAATGGGTCTAACTCATCCATTCA AGAGAGGGCTAAAGCACTAGAAGTTGTTCAATACATTAAAGATACTTATCATGATGGAAAATGTGAAGTTGCTTCCATTG AGGATGGAAAGCTGATGGCTGATGCTGAAACTGGAGAATTCTGGGGTTTTTTTGGTGGTTTTGCTCCACTTCCAAGGAAA ACAGCCAATGAAGATGACAAAGCCGTGGATTCTCTTCCTGCTAAGCTGTTTTGCATTTTGAAGGGACAGGCAGAACCCGT CCAGGCTGATTCTTTGACAAGAGAGTTGCTAGATACAAATAAGTGTTATATTCTAGATTGTGGGGTGGAAGTTTTTGTGT GGATGGGGAGAAATACCTCTCTTGATGAAAGAAAAAGTGCTAGTTCAGCAGCAGAAGAATTACTCCGTAGCCTTGATCGG CCAAAATCTCACATAATCCGTGTAATCGAAGGATTTGAAACAGTAATGTTCCGGTCAAAGTTTGATATGTGGCCTGAGAC AACTGCTGTAACTGTATCTGAGGATGGTAGAGGCAAGGTGGCTGCACTTCTAAAACGCCAAGGGGTTAATGTTAAGGGTC TTTTGAAAGCTGCTCCTGTAAAAGAAGAACCTCAACCATACATTGATTGTACCGGAAATCTGCAGGTTTGGCGTGTAAAT GGCCAAGAGAAGACACTACTTTCAGCTTCTGACCAGTCAAAATTTTACAGTGGCGATTGCTACATCTTTCAGTATTCATA TCCTGGAGAAGATAAAGAGGAACACCTTATTGGCACATGGTTTGGGAAGCAGAGTGTCGAGGAAGAAAGAACTTCAGCTA TCTCACTGGCAACCAAGATGGTGGAGTCATTGAAGTTTCTTCCTGCTCAGGCTCGCATCTATGAAGGAAATGAACCGATC CAGTTCTTTTCAATATTTCAGAGCTTTATTGTTTTTAAGGGTGGTGTAAGTGATGGTTACAAGAAATATATTGCTGAGAA GGAAGTTCCAGATGACACATATACAGAAGACAGAGTCGCATTATTTCGAGTTCAGGGTTCTGGGCCTGATAACATGCAAG CAATTCAAGTTGAACCAGTTGCATCATCTTTGAATTCCTCGTACTGTTACATATTAAACAGTGGCTCCTCTGTTTTTAAT TGGTCTGGAAACCTTACGACCCCAGAAGATCAGGAGCTTGTTGAGAGGCAACTGGATGTGATAAAGCCAAATGTACAATC CAAACCACAAAAAGAAGGCTCGGAATCTGAACAATTTTGGGAATTTTTGGGAGGCAAATCTGAATACCCCAGTCAGAAGA TTGCACGAGATGCTGAAAATGATCCTCACCTATTCTCATGCACTTTCTCAAAAGGAAATTTGAAGGTGACGGAGATATTC AATTTCACTCAGGATGATTTGATGACTGAAGATATATTCATCCTGGATTGTCACTCGGAGATCTTTGTCTGGGTTGGGCA ACAAGTTGATTCCAAGAATAGAATGCATGCTTTAACCATCGGAGAGAAATTTCTTGAACGTGATTTTCTCCTAGAAAAAT TATCTCATACTGCTCCAATTTATATTATCATGGAAGGGAGTGAGCCACCTTTCTTCACACGTTTCTTCACATGGGACTCT GGAAAATCTGCAATGCAGGGAAACTCATTTCAAAGGAAACTTGCAATAGTGAAAAATGGGATTTCCCCTACTCCGGAAAA ACCCAAGAGAAGAACACCAGTATCATATGGAGGGAGATCTAGTAGTTTGCCAGAAAAATCACAACGGTCAAGAAGCATGT CTTTCAGCCCTGACCGAGTTCGGGTGAGGGGCAGGTCTCCAGCCTTCAATGCTCTAGCAGCTAACTTTGAGAACCCAAAT TCCAGGAACCTTTCGACTCCACCTCCAATGGTTAGAAAGCTCTATCCCAAATCTGTGACCCCAGATTCATCTAAACTGGA TTCCAGATCTGCAGCAATAGCAGCACTTTCTGCTAGTTTTGAACAACCGGCACGGGAGCCTGTTGTACCCAAAACTCCTA AAGTGACTGAAGAGGCACCAAAACCAAAACCAAAACCAGAAACAAACTCGAAAGAGAAAGCTATGAGCAGCAGGATAGAA GCCCTCACAATAGAGGAAGATGTAAAAGAGGGTGAAGCTGAAGATGAAGAGGGTCTTCCAATATACCCATATGAGCGTCT TAAAACAACATCCATAGAACCTGTTGCCGAAATTGATGTGACCAAGCGAGAGACTTACCTGTCTTCAGAGGAGTTCCGAC AGAAATTTGGAATGACAAAAGACGCCTTCTATAAGCTGCCCAAATGGAAACAAAACAAGCTGAAAATGGCCCTTCAGTTG TTCTGA |