
Microexon ID | Ta_4D:259497935-259497945:+ |
Species | Triticum Aestivum | Coordinates | 4D:259497935..259497945 |
Microexon Cluster ID | MEP27 |
Size | 11 |
Phase | 1 |
Pfam Domain Motif | Gelsolin |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,11,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | MRRGADRYTGWMAGWGATCCYCAYYTGTTYDCWTKYWCWTTYWMTAAAGGRAADYTKRAGGTKRMRGARRTHTACAAYTTYWCYCARGATGAYYTGWTGACWGARGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GCAAGCTGGAG |
Microexon Amino Acid seq | GKLE |
Microexon-tag DNA Seq | CAAGATGTTGTTAGAGAACCCCATCTCTACACATTCTCATTTAGGAATGGCAAGCTGGAGGTAACTGAAGTTTACAATTTTTCACAAGATGATCTGTTGACCGAAGAT |
Microexon-tag Amino Acid Seq | QDVVREPHLYTFSFRNGKLEVTEVYNFSQDDLLTED |
Microexon-tag spanning region | 259497754-259498080 |
Microexon-tag prediction score | 0.9564 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS4D02G163700.1x |
Reference Transcript ID | TraesCS4D02G163700.1 |
Gene ID | TraesCS4D02G163700 |
Gene Name | NA |
Transcript ID | TraesCS4D02G163700.1 |
Protein ID | |
Gene ID | TraesCS4D02G163700 |
Gene Name | |
Pfam domain motif | Gelsolin |
Motif E-value | 0.00019 |
Motif start | 639 |
Motif end | 679 |
Protein seq | >TraesCS4D02G163700.1 MSSTKQILDPAFQGAGQKPGTEIWRIEDFKPVPLPKSDYGKFYCGDSYIVLQTTCNRGGAYLSDIHFWIGKDSSQDEAGT SAIKTVELDSMLGGRAVQHREPQGYESDKFLSYFKPCIIPMEGGFASGFRKPEEDKFETRLYICKGKRAIRVKEVPFARS SLNHDDVFILDTEKKIYQFNGANSNIQERAKALEVIQHLKDKYHEGVCDVAIVDDGKLQAESDSGEFWVVFGGFAPIGKK ALSDDDVILETTPTKLYSVNNGKLTLEDTVLTKSILENTKCFLLDCGSELYVWVGRVTQVDDRKAASVAVEEFIVKQNRP KTTRVTQVIQGYEDHTFKSKFDSWPVTNAAGASGEDGRGKVAALLKKKGDVKGASKNSPAVNEEIPPLLEGGGKLEVWCV DGSAKTALPKEDLGKFHSGDCYIVLYTYHSGDKREEFYLTYWIGKNSILEDQHTALQITNTIWNSMKGRPILGRIYEGKE PPQFIALFQPMVILKGGISCGYKNSVQEKGLPDETYPGTGVALVRINGTSIHNNKTLQVDAVSTSLSSTNCFVLQSGNSM FIWIGNTSSYEQQQWAAKIAEFLKPGVAVKHCKEGTESSSFWSALGGKQDYSNKNATQDVVREPHLYTFSFRNGKLEVTE VYNFSQDDLLTEDVMVLDTHAEVFVWMGQCVDTKEKQMAFEIGEIHGNSFQKKLSLMFGMRSESGPKGSGDGGPTQRASA LAALSSAFNPSSQDKQSTDRPQSSGDGGPTQRASALAALSSALNTSGKPKSPQSQSRAGQGSQRAAAVSALSNVLAAESP RIDAEGEAAGSSEFEMVDEGERTEPDVSREETANENGGETVFSYDRLISKSTDPVRGIDYKRRETYLSDSEFQTVFGMSK EEFYKQPRWKQEQQKRKADLF* |
CDS seq | >TraesCS4D02G163700.1 ATGTCAAGTACAAAACAGATACTTGATCCTGCATTTCAAGGAGCTGGCCAGAAACCTGGGACAGAAATATGGCGGATTGA AGATTTTAAGCCAGTTCCTTTGCCAAAGTCAGATTATGGTAAATTCTACTGTGGAGATTCATATATTGTTCTGCAGACGA CTTGTAACAGGGGCGGTGCTTACCTCTCTGACATTCACTTCTGGATTGGGAAAGATTCTAGTCAAGATGAAGCTGGCACT TCAGCAATCAAGACAGTTGAACTTGATTCCATGCTTGGGGGTCGTGCAGTCCAGCACAGGGAACCCCAAGGCTATGAATC TGATAAGTTCCTATCATACTTCAAGCCATGCATTATACCCATGGAGGGAGGTTTTGCTTCTGGGTTTAGAAAGCCAGAGG AGGACAAATTTGAAACACGGCTGTATATTTGCAAAGGAAAGAGAGCTATCAGAGTTAAAGAGGTTCCATTTGCTCGTTCC TCACTAAACCACGACGATGTCTTTATCTTGGATACTGAAAAGAAAATATATCAATTCAATGGTGCTAACTCCAATATTCA AGAAAGAGCCAAAGCACTGGAAGTGATCCAACATTTAAAGGACAAGTACCATGAAGGAGTTTGTGATGTTGCAATTGTTG ATGATGGAAAATTGCAAGCAGAATCAGATTCCGGTGAATTCTGGGTCGTTTTTGGTGGTTTTGCACCAATAGGGAAGAAA GCTCTAAGTGATGATGATGTTATTCTTGAAACTACACCAACAAAGCTTTACAGTGTCAATAATGGTAAACTGACGTTAGA AGATACCGTTTTGACAAAATCAATTCTTGAGAACACTAAATGCTTTTTACTTGACTGCGGGTCCGAGTTATATGTATGGG TTGGTCGAGTAACACAAGTGGATGATAGAAAAGCTGCAAGTGTGGCGGTTGAGGAATTCATTGTTAAGCAAAATAGGCCA AAGACAACAAGAGTAACTCAAGTAATTCAAGGTTATGAGGACCATACGTTCAAGTCCAAATTTGATTCGTGGCCTGTAAC TAACGCGGCAGGAGCCAGCGGGGAGGATGGCCGAGGAAAAGTTGCAGCGCTGTTGAAGAAAAAAGGTGATGTTAAGGGAG CCTCAAAAAACAGCCCTGCAGTAAATGAGGAAATTCCTCCTTTGCTAGAAGGCGGTGGAAAGCTTGAGGTATGGTGTGTT GATGGCAGTGCTAAGACTGCTCTTCCGAAGGAAGATCTTGGAAAATTTCATAGCGGGGATTGTTATATTGTTCTCTACAC ATATCATTCGGGTGACAAAAGAGAAGAATTCTATCTAACTTACTGGATTGGGAAGAATAGTATACTGGAAGATCAGCATA CGGCTCTTCAAATAACTAATACAATTTGGAATTCAATGAAAGGAAGACCTATTCTGGGTCGTATTTATGAAGGGAAGGAG CCTCCACAGTTTATTGCTCTTTTCCAGCCCATGGTTATCCTTAAGGGTGGAATCAGCTGCGGGTACAAGAATTCTGTACA AGAGAAGGGCTTGCCAGATGAAACATATCCTGGCACTGGTGTCGCTCTTGTTAGAATTAATGGAACGTCAATTCATAACA ATAAAACACTTCAAGTCGATGCGGTGTCAACATCCTTGAGTTCCACGAATTGTTTTGTCCTGCAATCTGGAAATTCAATG TTTATATGGATTGGCAACACAAGTTCTTATGAACAACAACAGTGGGCTGCAAAAATTGCTGAGTTCTTGAAGCCTGGCGT TGCTGTCAAACATTGCAAGGAGGGAACCGAGAGCTCTTCTTTCTGGTCTGCTCTAGGTGGAAAACAGGATTACTCAAATA AAAATGCCACACAAGATGTTGTTAGAGAACCCCATCTCTACACATTCTCATTTAGGAATGGCAAGCTGGAGGTAACTGAA GTTTACAATTTTTCACAAGATGATCTGTTGACCGAAGATGTGATGGTACTTGACACACACGCCGAAGTCTTTGTCTGGAT GGGTCAGTGTGTGGACACAAAAGAGAAACAAATGGCATTTGAAATTGGCGAGATTCACGGGAATTCATTTCAGAAGAAAC TTTCACTTATGTTTGGAATGCGTTCAGAGAGCGGGCCTAAGGGCTCAGGTGATGGTGGACCAACTCAAAGGGCATCAGCA CTGGCCGCACTTTCATCCGCTTTTAATCCATCTTCCCAGGATAAACAGTCTACTGATAGGCCTCAAAGCTCTGGTGATGG TGGACCTACTCAGCGTGCTTCGGCATTGGCTGCATTATCATCTGCACTCAATACGTCAGGGAAACCCAAAAGCCCACAAT CACAATCTCGTGCAGGTCAAGGGTCTCAGAGAGCAGCTGCTGTTTCAGCACTGTCTAATGTTTTAGCTGCCGAAAGTCCC CGCATTGATGCAGAGGGTGAAGCAGCGGGGTCCTCAGAATTTGAGATGGTGGATGAGGGGGAGCGAACTGAGCCTGACGT ATCACGGGAAGAGACTGCCAACGAAAATGGTGGTGAAACAGTCTTCAGCTATGACCGTCTGATATCAAAGTCTACTGACC CTGTCCGCGGAATAGATTACAAGCGCAGAGAGACATATTTATCGGACAGTGAATTCCAGACTGTGTTTGGTATGAGCAAG GAGGAGTTCTACAAGCAGCCAAGGTGGAAGCAAGAACAGCAGAAAAGAAAAGCGGATCTTTTCTGA |
Ta_4D:259497935-259497945:+ does not have available information here.