
Microexon ID | Ta_1D:92257759-92257769:+ |
Species | Triticum Aestivum | Coordinates | 1D:92257759..92257769 |
Microexon Cluster ID | MEP27 |
Size | 11 |
Phase | 1 |
Pfam Domain Motif | Gelsolin |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,11,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | MRRGADRYTGWMAGWGATCCYCAYYTGTTYDCWTKYWCWTTYWMTAAAGGRAADYTKRAGGTKRMRGARRTHTACAAYTTYWCYCARGATGAYYTGWTGACWGARGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTCTGTTCAAG |
Microexon Amino Acid seq | CLFK |
Microexon-tag DNA Seq | AAGGGTTGGCCAACAGATCCACATCTGTATACGTGTACTTTTCAACAATGTCTGTTCAAGGCAAAGGAGGTATTCAGCTTCTCGCAGGATGATCTGGCAACTGAGGAG |
Microexon-tag Amino Acid Seq | KGWPTDPHLYTCTFQQCLFKAKEVFSFSQDDLATEE |
Microexon-tag spanning region | 92257624-92257929 |
Microexon-tag prediction score | 0.8654 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS1D02G103000.1x |
Reference Transcript ID | TraesCS1D02G103000.1 |
Gene ID | TraesCS1D02G103000 |
Gene Name | NA |
Transcript ID | TraesCS1D02G103000.1 |
Protein ID | |
Gene ID | TraesCS1D02G103000 |
Gene Name | |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >TraesCS1D02G103000.1 MSTMKGVDGEFLGVGDKAGLDIWCIMGTNVVPIAKSLHGKFYTGNCYIILHTAEVKSGTRRHNVHYWIGEEAKEEDCLMA SDKAIELDAALGSHAIQCRETQGEESDKFLSYFKPCIIPVQGSFSSHWRRSGDECDGTTMFRCEGEHVARLREVPFSRSS LDHKAAFIVDTPSKIFLFSGCNSCIQTRAMALDVIKHLRENRHCGRCEIGIIEDGKLASDSDAGEFWNLFGGYAPIPRDV PDAANGGPMTTSPKKLFWINKRILVPMETHVLEREMLKSDRSYILDCGTEIFLWIGMTTLVSEKKTSATALEEYVHLQGR SSIGRTVIMTEGHEIVDFKLHFQHWPKNVVQKLYEAGRQKVAAIFKHQGYDVAEIPDDKPRQLISSNGCLKVWLVDRGCV TLLCTEEQEQLYNGDCYIIQYSYAEDGKDYHLFLAWFGQDSVQEDRVATVSLMSSMADSVKGRAVVGQVLEGREPELFFL VFKSLIIFKGGRSTAYKNSILQKSNRTEQYQKDGAALFRVQGLRPDCIQAIQVHLAASSLNSSHCYILQDGASFFTWLGS LSSPSDHVLLDRMMDKLCPLKQSLLVREGSEPDRFWTTLGGRSEYSKEKCVKGWPTDPHLYTCTFQQCLFKAKEVFSFSQ DDLATEETLILDCGEEIFVWVGLHSGVTSKEHALDFGKMFLQAGIARDGPRSINDTTVYAVAEGDEPAFFTSFFNWDSSK QAAAMLGNSFERKLAMLKGLSPKMETPDRSLRKSSSRRQEISSEPTTPEQQQQQPAAARRTFGSASAGRTARERLPPPSS AASASPATPSWSLKSRASSSPSTPATARRLFPSSSLHAPGTAAAHLPSPTAIGSPGRRR* |
CDS seq | >TraesCS1D02G103000.1 ATGTCGACAATGAAGGGCGTCGACGGCGAGTTCCTCGGCGTCGGCGACAAGGCAGGGCTGGATATCTGGTGTATTATGGG CACCAATGTAGTCCCAATTGCAAAATCCTTGCATGGCAAGTTCTACACTGGGAACTGCTATATCATACTCCATACAGCTG AAGTCAAGAGCGGAACTCGAAGGCATAATGTGCATTACTGGATAGGGGAGGAGGCCAAAGAGGAAGATTGTTTGATGGCC TCTGACAAGGCCATTGAGTTGGATGCGGCGCTGGGCTCTCACGCGATCCAGTGCAGGGAAACACAGGGCGAAGAATCCGA CAAGTTCTTGTCATACTTCAAACCATGCATCATCCCTGTACAAGGTAGCTTCTCTTCGCACTGGAGAAGATCTGGGGATG AATGCGACGGGACCACGATGTTTCGGTGCGAAGGAGAGCATGTAGCTCGTCTAAGAGAAGTTCCATTTTCGCGGTCCTCT CTGGATCATAAGGCGGCATTTATAGTGGACACACCATCCAAGATTTTCCTTTTCAGCGGTTGTAATTCTTGCATACAAAC AAGGGCTATGGCACTAGATGTCATAAAGCATCTGAGAGAAAACCGACACTGCGGCAGATGTGAGATCGGGATAATAGAGG ATGGAAAGCTTGCTAGTGATTCAGATGCTGGTGAGTTTTGGAACCTCTTTGGAGGCTATGCGCCTATTCCTCGTGATGTA CCAGACGCAGCCAATGGGGGACCGATGACTACCTCACCCAAGAAACTTTTTTGGATTAACAAGAGAATCCTTGTTCCCAT GGAGACACACGTTTTAGAAAGAGAAATGCTGAAGTCCGACAGAAGTTACATACTGGACTGTGGAACTGAAATATTCTTGT GGATAGGGATGACAACACTAGTTTCAGAGAAGAAGACATCTGCTACCGCATTAGAGGAGTACGTACACTTACAAGGCAGA TCATCAATTGGCCGCACTGTTATAATGACTGAAGGTCATGAAATTGTCGATTTTAAGCTGCATTTTCAGCATTGGCCTAA GAATGTTGTGCAGAAGTTGTACGAGGCAGGGCGGCAGAAAGTGGCAGCAATTTTCAAGCATCAGGGATATGATGTTGCAG AAATTCCAGATGATAAACCTCGGCAGCTCATCAGTAGTAATGGTTGTCTGAAGGTTTGGCTGGTGGACCGTGGTTGTGTA ACACTCCTTTGCACCGAGGAGCAGGAGCAACTTTACAACGGAGATTGCTATATCATACAGTACAGCTACGCTGAAGATGG AAAAGATTATCATCTGTTCCTTGCTTGGTTTGGACAAGATAGTGTACAGGAAGATAGAGTTGCCACAGTTTCATTGATGT CAAGCATGGCTGATTCAGTCAAAGGACGTGCAGTTGTGGGGCAAGTGCTTGAGGGCAGAGAACCAGAGTTGTTTTTCCTA GTATTCAAGTCATTGATCATATTCAAGGGTGGCAGGAGTACTGCATATAAGAACTCTATTCTGCAGAAAAGCAATAGAAC TGAACAGTACCAGAAAGATGGGGCTGCATTATTCCGGGTTCAAGGGCTGAGACCTGATTGCATACAAGCCATTCAGGTTC ATCTGGCCGCAAGTTCGCTTAATTCGTCACACTGTTACATTTTGCAAGACGGCGCTTCTTTCTTTACGTGGCTAGGAAGT CTTTCTTCACCCAGTGACCATGTTCTACTTGATAGAATGATGGATAAGTTGTGTCCACTGAAGCAATCATTGTTAGTAAG AGAAGGTTCTGAACCTGACCGTTTCTGGACAACATTAGGAGGAAGATCAGAATACTCCAAAGAAAAGTGTGTCAAGGGTT GGCCAACAGATCCACATCTGTATACGTGTACTTTTCAACAATGTCTGTTCAAGGCAAAGGAGGTATTCAGCTTCTCGCAG GATGATCTGGCAACTGAGGAGACGTTGATACTGGACTGCGGCGAAGAAATCTTCGTCTGGGTTGGACTTCACTCAGGTGT CACGTCCAAGGAGCACGCCCTCGACTTCGGCAAGATGTTCCTTCAGGCAGGCATTGCTCGGGATGGACCACGGTCGATCA ATGACACAACCGTGTATGCTGTCGCGGAAGGGGATGAACCTGCATTTTTCACCAGCTTCTTCAACTGGGATAGCTCAAAA CAAGCTGCAGCTATGCTGGGCAACTCATTTGAGAGGAAGCTGGCAATGCTGAAAGGGCTTTCACCAAAAATGGAGACACC GGACAGGAGCTTGCGCAAGTCTTCGTCGCGAAGACAGGAGATATCGTCAGAGCCAACAACACCGGAGCAGCAGCAGCAGC AGCCGGCGGCGGCGAGGAGGACGTTTGGGTCTGCCTCTGCCGGGAGGACCGCTAGGGAGAGACTGCCGCCACCTTCATCC GCAGCGTCGGCGTCGCCGGCAACACCATCCTGGTCTCTCAAGAGCCGCGCGTCGTCGTCGCCGTCGACGCCAGCAACGGC GCGGCGGCTCTTCCCTTCCTCCTCGCTGCACGCGCCGGGGACAGCGGCCGCACATCTCCCCTCCCCTACGGCCATAGGGA GTCCTGGTCGACGACGGTGA |
Ta_1D:92257759-92257769:+ does not have available information here.