
Microexon ID | Ta_1B:146794884-146794894:+ |
Species | Triticum Aestivum | Coordinates | 1B:146794884..146794894 |
Microexon Cluster ID | MEP27 |
Size | 11 |
Phase | 1 |
Pfam Domain Motif | Gelsolin |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,11,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | MRRGADRYTGWMAGWGATCCYCAYYTGTTYDCWTKYWCWTTYWMTAAAGGRAADYTKRAGGTKRMRGARRTHTACAAYTTYWCYCARGATGAYYTGWTGACWGARGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTCTGTTCAAG |
Microexon Amino Acid seq | CLFK |
Microexon-tag DNA Seq | AAGGGTTGGCCAACAGATCCACATCTGTATACGTGTACTTTTCAACAATGTCTGTTCAAGGCAAAGGAGGTATTCAGCTTCTCGCAGGATGATCTGGCAACGGAGGAG |
Microexon-tag Amino Acid Seq | KGWPTDPHLYTCTFQQCLFKAKEVFSFSQDDLATEE |
Microexon-tag spanning region | 146794749-146795054 |
Microexon-tag prediction score | 0.8634 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS1B02G122300.1x |
Reference Transcript ID | TraesCS1B02G122300.1 |
Gene ID | TraesCS1B02G122300 |
Gene Name | NA |
Transcript ID | TraesCS1B02G122300.1 |
Protein ID | |
Gene ID | TraesCS1B02G122300 |
Gene Name | |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >TraesCS1B02G122300.1 MSTMKGVDGEFLGVGDKPGLNIWCIMGTSVVPIAKSLHGKFYNGNCYIILHTAEVKSGTRRHNVHYWIGEEAKEEDCLMA SDKAVELDAALGSHTIQYRETQGEESDKFLSYFKPCIIPVQGSFSSHWRRSGDECDGTTMFRCEGEHVARLREVPFSRSS LDHKAAFIVDTPSKIFLFSGCNSCVQTRAMALDVIKHLRENRHCGRCEIGIIEDGKLAGDSDAGEFWNLFGGYAPIPRDV PDAANGGPMTTSPKKLFWINKRILVPMEAQFLEREMLKSDRSYILDCGAEIFLWIGMTTLVSEKKTSATALEEYVHLQGR SSIGRTVIMTEGHEIADFKLHFQHWPKNVVQKLYEAGREKVAAIFKHQGYDVAEIPDDNPRPLISSNGCLKVWLVDRGCV TLLCTEEQEQLYNGDCYIIQYSYAEDGKDYHLFLAWFGQDSVQEDRVATVSLMSSMADSVKGRAVVGQVLEGREPELFFL VFKSLIIFKGGRSTAYKNSILQKSNRTELYQKDGAALFRVQGLRPDCIRAIQVHLAASSLNSSHCYILQDGASFFTWLGS LSSPSDHVLLDRMMDKFAILQPLKQSSLVREGSETDRFWTTLGGRSEYSKEKRIKGWPTDPHLYTCTFQQCLFKAKEVFS FSQDDLATEETLILDCGEEIYVWVGLHSGVTSKEHALDFGKMFLQAGIARDGPRSVTETTVYAVAEGDEPAFFTSFFNWD SSKQAAAMLGNSFERKLAMLKGLSPKLESPDRSLRKSSSRRQGMSSEPTTPEQQQQQQPAARRTFGSASAGRTARERLPP SSSAASPSPATPSWSLKSRGSSSPSMPATARRLFPSSLHAPGTAAAHLPSPTAIGSPGRRR* |
CDS seq | >TraesCS1B02G122300.1 ATGTCGACAATGAAGGGCGTCGACGGCGAGTTCCTCGGCGTCGGCGACAAGCCAGGGCTGAATATCTGGTGTATTATGGG CACCAGTGTAGTCCCAATTGCAAAATCCTTGCATGGCAAGTTCTACAATGGGAACTGCTATATCATACTCCATACAGCTG AAGTCAAGAGCGGAACTCGAAGGCATAATGTGCATTACTGGATAGGGGAGGAGGCCAAAGAGGAAGATTGTTTGATGGCC TCTGACAAGGCCGTTGAGTTGGATGCGGCGCTGGGCTCTCACACGATCCAGTACAGGGAAACACAAGGCGAAGAATCCGA CAAGTTCTTGTCATACTTCAAACCATGCATCATCCCTGTACAAGGTAGCTTCTCTTCGCACTGGAGAAGATCTGGGGATG AATGCGACGGGACCACGATGTTTCGGTGCGAAGGAGAGCATGTAGCTCGTCTAAGAGAAGTTCCATTTTCGCGGTCCTCT CTGGATCATAAGGCGGCATTTATAGTGGACACACCATCCAAGATTTTCCTTTTCAGCGGTTGTAATTCTTGCGTACAAAC AAGGGCTATGGCACTAGATGTCATAAAGCATTTGAGAGAAAACCGACACTGCGGCAGATGTGAGATCGGGATAATAGAGG ATGGAAAGCTTGCTGGTGATTCAGATGCTGGTGAGTTTTGGAACCTCTTTGGAGGTTATGCGCCTATTCCTCGTGATGTA CCAGACGCAGCCAATGGGGGACCGATGACTACCTCACCCAAGAAACTTTTTTGGATTAACAAGAGAATCCTTGTTCCCAT GGAGGCCCAGTTTTTAGAAAGAGAAATGCTGAAGTCTGACAGAAGTTACATACTGGACTGTGGAGCTGAAATATTCTTGT GGATAGGGATGACAACACTAGTTTCAGAGAAGAAGACATCTGCTACCGCATTAGAGGAGTACGTACACTTACAAGGCAGA TCATCAATTGGCCGCACTGTTATAATGACTGAAGGTCATGAAATTGCCGATTTTAAGCTGCATTTTCAGCATTGGCCAAA GAATGTTGTGCAGAAGTTGTATGAGGCAGGGCGGGAGAAAGTGGCAGCAATTTTCAAGCATCAGGGCTACGATGTTGCAG AAATTCCAGATGACAATCCTCGGCCGCTCATCAGTAGTAATGGTTGTCTTAAGGTCTGGCTGGTAGACCGTGGTTGTGTA ACCCTCCTTTGCACCGAGGAGCAGGAGCAACTATACAATGGAGACTGCTATATCATACAGTACAGCTACGCTGAAGATGG AAAAGATTATCATCTGTTCCTTGCTTGGTTTGGACAGGATAGTGTACAGGAAGATAGAGTTGCCACAGTTTCATTGATGT CAAGCATGGCTGATTCAGTCAAAGGGCGTGCAGTTGTGGGGCAAGTGCTTGAGGGCAGAGAACCAGAGTTGTTTTTCCTA GTATTCAAGTCATTGATCATATTCAAGGGTGGCAGGAGTACTGCATATAAGAACTCTATTCTGCAGAAAAGCAATAGAAC TGAACTGTACCAGAAAGATGGGGCCGCATTATTCCGGGTTCAAGGGCTGAGACCTGATTGCATACGAGCCATTCAGGTTC ATCTGGCTGCAAGTTCGCTTAATTCGTCACACTGTTACATTTTGCAAGACGGTGCTTCTTTCTTTACGTGGCTAGGAAGT CTTTCCTCACCCAGTGACCATGTTCTACTTGATAGAATGATGGATAAGTTTGCTATTTTGCAGCCACTGAAGCAATCATC GCTAGTAAGAGAAGGTTCTGAAACTGACCGTTTCTGGACAACATTAGGAGGAAGATCAGAATACTCCAAAGAAAAGCGTA TCAAGGGTTGGCCAACAGATCCACATCTGTATACGTGTACTTTTCAACAATGTCTGTTCAAGGCAAAGGAGGTATTCAGC TTCTCGCAGGATGATCTGGCAACGGAGGAGACCTTGATACTGGACTGCGGCGAAGAAATCTACGTCTGGGTTGGACTTCA CTCAGGTGTCACGTCCAAGGAGCACGCCCTCGACTTCGGCAAGATGTTCCTTCAGGCAGGCATTGCTCGGGATGGACCAC GGTCGGTCACTGAGACAACCGTGTATGCTGTCGCGGAAGGGGATGAACCTGCATTTTTCACCAGCTTCTTCAATTGGGAT AGCTCAAAACAAGCTGCAGCTATGCTGGGCAACTCATTTGAGAGGAAGCTGGCAATGCTGAAAGGGCTTTCACCAAAATT GGAGTCACCGGACAGGAGCTTGCGCAAGTCTTCGTCGCGAAGACAGGGGATGTCGTCAGAGCCGACGACGCCGGAGCAGC AGCAGCAGCAGCAGCCGGCGGCGAGGAGGACGTTCGGTTCTGCCTCTGCCGGGAGGACCGCTAGGGAGAGACTGCCACCA TCTTCATCCGCAGCGTCGCCGTCGCCGGCAACACCTTCCTGGTCTCTCAAGAGCCGAGGGTCGTCGTCGCCGTCGATGCC AGCCACGGCACGGCGGCTTTTCCCTTCCTCGCTGCACGCACCGGGGACAGCGGCCGCACATCTCCCCTCCCCTACGGCCA TAGGGAGTCCTGGTCGACGACGGTGA |
Ta_1B:146794884-146794894:+ does not have available information here.