
Microexon ID | Ta_1A:88349938-88349948:+ |
Species | Triticum Aestivum | Coordinates | 1A:88349938..88349948 |
Microexon Cluster ID | MEP27 |
Size | 11 |
Phase | 1 |
Pfam Domain Motif | Gelsolin |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,11,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | MRRGADRYTGWMAGWGATCCYCAYYTGTTYDCWTKYWCWTTYWMTAAAGGRAADYTKRAGGTKRMRGARRTHTACAAYTTYWCYCARGATGAYYTGWTGACWGARGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTCTGTTCAAG |
Microexon Amino Acid seq | CLFK |
Microexon-tag DNA Seq | AAGGGTTGGCCAACAGATCCACATCTGTATACGTGTACTTTTCAACAATGTCTGTTCAAGGCAAAGGAGGTATTCAGCTTCTCGCAGGATGACCTGGCAACTGAGGAG |
Microexon-tag Amino Acid Seq | KGWPTDPHLYTCTFQQCLFKAKEVFSFSQDDLATEE |
Microexon-tag spanning region | 88349803-88350108 |
Microexon-tag prediction score | 0.8637 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS1A02G094200.1x |
Reference Transcript ID | TraesCS1A02G094200.1 |
Gene ID | TraesCS1A02G094200 |
Gene Name | NA |
Transcript ID | TraesCS1A02G094200.1 |
Protein ID | |
Gene ID | TraesCS1A02G094200 |
Gene Name | |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >TraesCS1A02G094200.1 MSTMKGVDDEFLGVGDKPGLDIWCIMGTNVVPIAKSFHGKFYTGNCYIILHTAEVKSGTRRHNVHYWIGEEAKEEDCLMA SDKAVELDAALGSHAIQYRETQGEESDKFLSYFKPCIIPVQGSFSSHWRRSGDECDGTTMFRCEGEHVARLREVPFSRSS LDHKAAFIVDTPSKIFLFSGCHSCIQTRAMALDVIKHLRENRHCGRCEIGIIEDGKLAGDSDAGEFWNLFGGYAPIPRDV PDAANGGPMTTSPKKLFWINKRILVPMETHVLEREMLKSDRSYILDCGAEIFLWIGMTTLVSEKKTSATALEEYVHLQDR SSIGRTVIMTEGHEIVDFKLHFQHWPKNVVQKLYEAGREKVAAIFKHQGYDVAEIPDDKPRQLISSNGCLKVWLVDRGCV TLLCTEELEQLYNGDCYIIQYSYAEDGKDYHLFLAWFGQDSVQEDRVATVSLMPSMADSVKGRAVVGQVLEGREPELFFL VFKSLIIFKGGRSTAYKNSILQKSNRTELYQKDGAALFRVQGLRPDCIQAIQVHLAASSLNLSHCYILQDGASFFTWLGS LSSPSDHVLLDRMMDKLCPLKQSLLVREGSEPDRFWTTLGGRSEYSKEKCVKGWPTDPHLYTCTFQQCLFKAKEVFSFSQ DDLATEETLILDCGEQIFVWVGLHSGVTSKEHALDFGKMFLQAGIAWDGPRSITDTTVYAVAEGDEPAFFTSFFNWDSSK QAAAMLGNSFERKLAMLKGLSPKLESPDRSLRKSSSRRQGMLSEPTTPEQQQQQQPAARRTFGSASAGRTARERLPPSSS AASASPATPPWSLKSRTSSSPSTPATARRLFPSSSLHAPGTAAAHLPSPTAIGSPGRRR* |
CDS seq | >TraesCS1A02G094200.1 ATGTCGACAATGAAGGGCGTCGACGACGAGTTCCTCGGCGTCGGCGACAAGCCAGGGCTGGATATCTGGTGTATTATGGG CACCAATGTAGTCCCAATTGCAAAATCCTTCCATGGCAAGTTCTACACTGGGAACTGCTATATCATACTCCATACAGCTG AAGTCAAGAGCGGAACTCGAAGGCATAATGTGCATTACTGGATAGGGGAGGAGGCCAAAGAGGAAGATTGTTTGATGGCC TCTGACAAGGCCGTTGAGTTGGATGCGGCGCTGGGCTCTCACGCGATCCAGTACAGGGAAACACAAGGCGAAGAATCCGA CAAGTTCTTGTCATACTTCAAACCATGCATCATCCCTGTACAAGGTAGCTTCTCTTCGCACTGGAGAAGATCTGGGGATG AATGCGACGGGACCACGATGTTTCGGTGCGAAGGAGAGCATGTAGCTCGTCTAAGAGAAGTTCCATTTTCGCGGTCCTCT CTGGATCATAAGGCGGCATTTATAGTGGACACACCATCCAAGATTTTCCTTTTCAGCGGTTGTCATTCTTGCATACAAAC AAGGGCTATGGCACTAGATGTCATAAAGCATCTGAGAGAAAACCGACACTGCGGCAGATGTGAGATCGGGATAATAGAGG ATGGAAAGCTTGCTGGTGATTCAGATGCTGGTGAGTTTTGGAACCTCTTTGGAGGCTATGCGCCTATTCCTCGTGATGTA CCAGACGCAGCCAATGGGGGACCGATGACTACCTCACCCAAGAAACTTTTTTGGATTAACAAGAGAATCCTTGTTCCCAT GGAGACACATGTTTTAGAAAGAGAAATGCTGAAGTCCGACAGAAGTTACATACTGGACTGTGGAGCTGAAATATTCTTGT GGATAGGGATGACAACACTAGTTTCAGAGAAGAAGACATCTGCTACCGCATTAGAGGAGTACGTACACTTACAAGACAGA TCATCAATTGGCCGCACTGTTATAATGACTGAAGGTCATGAAATTGTCGATTTTAAGCTGCATTTTCAGCATTGGCCTAA GAATGTTGTGCAGAAGTTGTACGAGGCAGGGCGGGAGAAAGTGGCAGCAATTTTCAAGCATCAGGGATATGATGTTGCAG AAATTCCAGATGATAAACCTCGGCAGCTCATCAGTAGTAATGGTTGTCTGAAGGTCTGGCTGGTGGACCGTGGTTGTGTA ACACTCCTTTGCACCGAGGAGCTGGAGCAACTTTACAACGGAGATTGCTATATCATACAGTACAGCTACGCTGAAGATGG AAAAGATTATCATCTGTTCCTTGCTTGGTTTGGACAAGATAGTGTACAGGAAGATAGAGTTGCCACAGTTTCATTGATGC CAAGCATGGCTGATTCAGTCAAAGGACGTGCAGTTGTGGGGCAAGTGCTTGAGGGCAGAGAACCAGAGTTGTTTTTCCTA GTATTCAAGTCACTGATCATATTCAAGGGTGGCAGGAGTACTGCATATAAGAACTCTATTCTGCAGAAAAGCAATAGAAC TGAACTGTACCAGAAAGATGGGGCCGCATTATTCCGGGTTCAAGGGCTGAGACCTGATTGCATACAAGCCATTCAGGTTC ATCTGGCTGCAAGTTCGCTTAATTTGTCACACTGTTACATTTTGCAAGACGGCGCTTCTTTCTTTACATGGCTAGGAAGT CTTTCTTCACCCAGTGACCATGTTCTACTTGATAGAATGATGGATAAGTTGTGTCCACTGAAGCAATCATTGTTAGTAAG AGAAGGTTCTGAACCTGACCGTTTCTGGACAACATTAGGAGGAAGATCAGAATACTCCAAAGAAAAGTGTGTCAAGGGTT GGCCAACAGATCCACATCTGTATACGTGTACTTTTCAACAATGTCTGTTCAAGGCAAAGGAGGTATTCAGCTTCTCGCAG GATGACCTGGCAACTGAGGAGACGTTGATACTGGACTGCGGCGAACAAATCTTCGTCTGGGTTGGACTTCACTCAGGTGT CACGTCCAAGGAGCACGCCCTCGACTTCGGCAAGATGTTCCTTCAGGCAGGCATTGCTTGGGATGGACCACGGTCGATCA CTGACACAACCGTGTATGCTGTCGCGGAAGGCGATGAACCTGCATTTTTCACCAGCTTCTTCAACTGGGATAGCTCAAAA CAAGCTGCAGCTATGCTGGGCAACTCATTTGAGAGGAAGCTGGCAATGCTGAAAGGGCTTTCACCAAAATTGGAGTCACC GGACAGGAGCTTGCGCAAGTCTTCGTCGCGAAGACAGGGGATGTTGTCAGAGCCGACGACGCCGGAGCAGCAGCAGCAGC AGCAGCCGGCCGCGAGGAGGACGTTCGGGTCTGCCTCTGCCGGGAGGACCGCTAGGGAGAGACTGCCGCCATCTTCATCG GCAGCGTCGGCGTCGCCGGCAACACCACCCTGGTCTCTCAAGAGCCGCACGTCGTCGTCGCCGTCGACGCCAGCAACGGC GCGGCGGCTCTTCCCTTCCTCCTCGCTGCACGCGCCGGGGACAGCGGCCGCACATCTCCCCTCCCCTACGGCCATAGGGA GTCCTGGTCGACGACGGTGA |
Ta_1A:88349938-88349948:+ does not have available information here.